RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
ZNF3-206ENST00000415068 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
ZNF3-206ENST00000415068 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
ZNF3-206ENST00000415068 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
ZNF3-206ENST00000415068 COG3Q96JB2 828 aa17.85■□□□□ 0.45
ZNF3-206ENST00000415068 KIF20BQ96Q89 1820 aa17.85■□□□□ 0.45
ZNF3-206ENST00000415068 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
ZNF3-206ENST00000415068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.45
ZNF3-206ENST00000415068 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
ZNF3-206ENST00000415068 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.45
ZNF3-206ENST00000415068 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
ZNF3-206ENST00000415068 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
ZNF3-206ENST00000415068 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
ZNF3-206ENST00000415068 ATF3P18847 181 aa17.82■□□□□ 0.44
ZNF3-206ENST00000415068 NME9Q86XW9 330 aa17.82■□□□□ 0.44
ZNF3-206ENST00000415068 PMFBP1Q8TBY8 1022 aa17.82■□□□□ 0.44
ZNF3-206ENST00000415068 MST1RQ04912 1400 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
ZNF3-206ENST00000415068 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
ZNF3-206ENST00000415068 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 LRRC7Q96NW7 1537 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
ZNF3-206ENST00000415068 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
ZNF3-206ENST00000415068 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
ZNF3-206ENST00000415068 USP54Q70EL1 1684 aa17.79■□□□□ 0.44
ZNF3-206ENST00000415068 MSH6P52701 1360 aa17.79■□□□□ 0.44
ZNF3-206ENST00000415068 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
ZNF3-206ENST00000415068 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
ZNF3-206ENST00000415068 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
ZNF3-206ENST00000415068 PSME1Q06323 249 aa17.77■□□□□ 0.44
ZNF3-206ENST00000415068 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
ZNF3-206ENST00000415068 ORAI2Q96SN7 254 aa17.76■□□□□ 0.43
ZNF3-206ENST00000415068 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
ZNF3-206ENST00000415068 MAP2P11137 1827 aaKnown RBP17.75■□□□□ 0.43
ZNF3-206ENST00000415068 KIF1AQ12756 1690 aa17.75■□□□□ 0.43
ZNF3-206ENST00000415068 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
ZNF3-206ENST00000415068 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
ZNF3-206ENST00000415068 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
ZNF3-206ENST00000415068 ZNF335Q9H4Z2 1342 aaPredicted RBP17.74■□□□□ 0.43
ZNF3-206ENST00000415068 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
ZNF3-206ENST00000415068 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
ZNF3-206ENST00000415068 SHPRHQ149N8 1683 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 FCHSD2O94868 740 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 RUNDC1Q96C34 613 aa17.72■□□□□ 0.43
ZNF3-206ENST00000415068 FOXO3O43524 673 aa17.71■□□□□ 0.43
ZNF3-206ENST00000415068 NLRP6P59044 892 aa17.71■□□□□ 0.43
ZNF3-206ENST00000415068 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
ZNF3-206ENST00000415068 IL13P35225 146 aa17.7■□□□□ 0.42
ZNF3-206ENST00000415068 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
ZNF3-206ENST00000415068 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
ZNF3-206ENST00000415068 ZNF521Q96K83 1311 aa17.7■□□□□ 0.42
ZNF3-206ENST00000415068 PIK3C2AO00443 1686 aa17.69■□□□□ 0.42
ZNF3-206ENST00000415068 CCDC27Q2M243 656 aa17.69■□□□□ 0.42
ZNF3-206ENST00000415068 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
ZNF3-206ENST00000415068 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
ZNF3-206ENST00000415068 EMILIN1Q9Y6C2 1016 aa17.67■□□□□ 0.42
ZNF3-206ENST00000415068 FBLN1P23142 703 aa17.66■□□□□ 0.42
ZNF3-206ENST00000415068 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
ZNF3-206ENST00000415068 USP19O94966 1318 aa17.66■□□□□ 0.42
ZNF3-206ENST00000415068 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
ZNF3-206ENST00000415068 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
ZNF3-206ENST00000415068 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
ZNF3-206ENST00000415068 APAF1O14727 1248 aa17.64■□□□□ 0.41
ZNF3-206ENST00000415068 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-206ENST00000415068 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
ZNF3-206ENST00000415068 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
ZNF3-206ENST00000415068 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
ZNF3-206ENST00000415068 LTBP4Q8N2S1 1624 aa17.64■□□□□ 0.41
ZNF3-206ENST00000415068 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
ZNF3-206ENST00000415068 SOS2Q07890 1332 aaPredicted RBP17.63■□□□□ 0.41
ZNF3-206ENST00000415068 FLT4P35916 1363 aa17.63■□□□□ 0.41
ZNF3-206ENST00000415068 GCP02774 474 aa17.62■□□□□ 0.41
ZNF3-206ENST00000415068 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
ZNF3-206ENST00000415068 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
ZNF3-206ENST00000415068 SLIT3O75094 1523 aa17.62■□□□□ 0.41
ZNF3-206ENST00000415068 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 IP6K1Q92551 441 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 SPATA31A3Q5VYP0 1347 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
ZNF3-206ENST00000415068 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
ZNF3-206ENST00000415068 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
ZNF3-206ENST00000415068 PXDNQ92626 1479 aa17.6■□□□□ 0.41
ZNF3-206ENST00000415068 NFAT5O94916 1531 aa17.59■□□□□ 0.41
ZNF3-206ENST00000415068 PPM1GO15355 546 aaPredicted RBP17.59■□□□□ 0.41
ZNF3-206ENST00000415068 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
ZNF3-206ENST00000415068 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
ZNF3-206ENST00000415068 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
ZNF3-206ENST00000415068 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
ZNF3-206ENST00000415068 AMPHP49418 695 aa17.58■□□□□ 0.4
ZNF3-206ENST00000415068 WWC1Q8IX03 1113 aa17.58■□□□□ 0.4
ZNF3-206ENST00000415068 HOXC9P31274 260 aa17.57■□□□□ 0.4
ZNF3-206ENST00000415068 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
ZNF3-206ENST00000415068 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms