RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 HSPA2P54652 639 aa15.51■□□□□ 0.07
CLUHP3-202ENST00000411844 COG3Q96JB2 828 aa15.51■□□□□ 0.07
CLUHP3-202ENST00000411844 USP31Q70CQ4 1352 aa15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 PDE3BQ13370 1112 aa15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 NGDNQ8NEJ9 315 aaKnown RBP15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 C19orf44Q9H6X5 657 aa15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
CLUHP3-202ENST00000411844 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
CLUHP3-202ENST00000411844 SHPRHQ149N8 1683 aa15.49■□□□□ 0.07
CLUHP3-202ENST00000411844 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
CLUHP3-202ENST00000411844 NME9Q86XW9 330 aa15.49■□□□□ 0.07
CLUHP3-202ENST00000411844 STRCQ7RTU9 1775 aa15.49■□□□□ 0.07
CLUHP3-202ENST00000411844 COL3A1P02461 1466 aaPredicted RBP15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 PHF8Q9UPP1 1060 aa15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
CLUHP3-202ENST00000411844 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
CLUHP3-202ENST00000411844 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
CLUHP3-202ENST00000411844 USP54Q70EL1 1684 aa15.47■□□□□ 0.07
CLUHP3-202ENST00000411844 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.07
CLUHP3-202ENST00000411844 TMEM94Q12767 1356 aa15.46■□□□□ 0.07
CLUHP3-202ENST00000411844 KIF1AQ12756 1690 aa15.45■□□□□ 0.06
CLUHP3-202ENST00000411844 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
CLUHP3-202ENST00000411844 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
CLUHP3-202ENST00000411844 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
CLUHP3-202ENST00000411844 PNNQ9H307 717 aaKnown RBP15.43■□□□□ 0.06
CLUHP3-202ENST00000411844 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
CLUHP3-202ENST00000411844 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
CLUHP3-202ENST00000411844 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
CLUHP3-202ENST00000411844 ATF3P18847 181 aa15.42■□□□□ 0.06
CLUHP3-202ENST00000411844 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
CLUHP3-202ENST00000411844 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
CLUHP3-202ENST00000411844 MSH6P52701 1360 aa15.41■□□□□ 0.06
CLUHP3-202ENST00000411844 KIF24Q5T7B8 1368 aa15.41■□□□□ 0.06
CLUHP3-202ENST00000411844 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
CLUHP3-202ENST00000411844 MST1RQ04912 1400 aa15.41■□□□□ 0.06
CLUHP3-202ENST00000411844 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
CLUHP3-202ENST00000411844 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
CLUHP3-202ENST00000411844 ZRANB1Q9UGI0 708 aa15.4■□□□□ 0.06
CLUHP3-202ENST00000411844 ZNF521Q96K83 1311 aa15.4■□□□□ 0.06
CLUHP3-202ENST00000411844 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
CLUHP3-202ENST00000411844 U2AF1L5P0DN76 240 aaPredicted RBP15.38■□□□□ 0.05
CLUHP3-202ENST00000411844 U2AF1Q01081 240 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLUHP3-202ENST00000411844 PSME1Q06323 249 aa15.38■□□□□ 0.05
CLUHP3-202ENST00000411844 FCHSD2O94868 740 aa15.37■□□□□ 0.05
CLUHP3-202ENST00000411844 CCDC27Q2M243 656 aa15.37■□□□□ 0.05
CLUHP3-202ENST00000411844 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
CLUHP3-202ENST00000411844 APAF1O14727 1248 aa15.36■□□□□ 0.05
CLUHP3-202ENST00000411844 NLRP6P59044 892 aa15.36■□□□□ 0.05
CLUHP3-202ENST00000411844 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
CLUHP3-202ENST00000411844 SBNO1A3KN83 1393 aa15.36■□□□□ 0.05
CLUHP3-202ENST00000411844 IL13P35225 146 aa15.35■□□□□ 0.05
CLUHP3-202ENST00000411844 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
CLUHP3-202ENST00000411844 ABTB2Q8N961 1025 aa15.35■□□□□ 0.05
CLUHP3-202ENST00000411844 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
CLUHP3-202ENST00000411844 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 NEFLP07196 543 aa15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 PLEKHF1Q96S99 279 aa15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 RTL1A6NKG5 1358 aa15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 FLT4P35916 1363 aa15.34■□□□□ 0.05
CLUHP3-202ENST00000411844 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 MARF1Q9Y4F3 1742 aaKnown RBP15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 XIRP1Q702N8 1843 aaKnown RBP15.33■□□□□ 0.04
CLUHP3-202ENST00000411844 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
CLUHP3-202ENST00000411844 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
CLUHP3-202ENST00000411844 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
CLUHP3-202ENST00000411844 MAPK8IP3Q9UPT6 1336 aa15.32■□□□□ 0.04
CLUHP3-202ENST00000411844 FOXO3O43524 673 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 NEFMP07197 916 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 FBLN1P23142 703 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 MAP3K19Q56UN5 1328 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 SLIT3O75094 1523 aa15.31■□□□□ 0.04
CLUHP3-202ENST00000411844 E9PSI1 815 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 USP19O94966 1318 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 ERICH6BQ5W0A0 696 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 PEAK1Q9H792 1746 aa15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
CLUHP3-202ENST00000411844 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
CLUHP3-202ENST00000411844 NFAT5O94916 1531 aa15.29■□□□□ 0.04
CLUHP3-202ENST00000411844 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
CLUHP3-202ENST00000411844 WWC1Q8IX03 1113 aa15.29■□□□□ 0.04
CLUHP3-202ENST00000411844 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
CLUHP3-202ENST00000411844 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
CLUHP3-202ENST00000411844 EIF4A2Q14240 407 aaKnown RBP15.28■□□□□ 0.04
CLUHP3-202ENST00000411844 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
CLUHP3-202ENST00000411844 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms