RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 TRIM37O94972 964 aa17.16■□□□□ 0.34
MIR1249-201ENST00000408671 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
MIR1249-201ENST00000408671 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
MIR1249-201ENST00000408671 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
MIR1249-201ENST00000408671 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
MIR1249-201ENST00000408671 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
MIR1249-201ENST00000408671 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
MIR1249-201ENST00000408671 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
MIR1249-201ENST00000408671 APBA3O96018 575 aa17.12■□□□□ 0.33
MIR1249-201ENST00000408671 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
MIR1249-201ENST00000408671 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
MIR1249-201ENST00000408671 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
MIR1249-201ENST00000408671 CHD4Q14839 1912 aa17.1■□□□□ 0.33
MIR1249-201ENST00000408671 KCNQ2O43526 872 aa17.1■□□□□ 0.33
MIR1249-201ENST00000408671 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
MIR1249-201ENST00000408671 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
MIR1249-201ENST00000408671 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
MIR1249-201ENST00000408671 PARP4Q9UKK3 1724 aaKnown RBP17.08■□□□□ 0.32
MIR1249-201ENST00000408671 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.32
MIR1249-201ENST00000408671 TULP4Q9NRJ4 1543 aa17.08■□□□□ 0.32
MIR1249-201ENST00000408671 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
MIR1249-201ENST00000408671 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.32
MIR1249-201ENST00000408671 RGL3Q3MIN7 710 aa17.08■□□□□ 0.32
MIR1249-201ENST00000408671 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
MIR1249-201ENST00000408671 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.32
MIR1249-201ENST00000408671 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
MIR1249-201ENST00000408671 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
MIR1249-201ENST00000408671 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
MIR1249-201ENST00000408671 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
MIR1249-201ENST00000408671 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
MIR1249-201ENST00000408671 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
MIR1249-201ENST00000408671 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
MIR1249-201ENST00000408671 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
MIR1249-201ENST00000408671 ITSN1Q15811 1721 aa17.06■□□□□ 0.32
MIR1249-201ENST00000408671 MYOM1P52179 1685 aa17.06■□□□□ 0.32
MIR1249-201ENST00000408671 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
MIR1249-201ENST00000408671 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
MIR1249-201ENST00000408671 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
MIR1249-201ENST00000408671 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
MIR1249-201ENST00000408671 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
MIR1249-201ENST00000408671 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
MIR1249-201ENST00000408671 ATP7BP35670 1465 aa17.01■□□□□ 0.31
MIR1249-201ENST00000408671 CFAP70Q5T0N1 1121 aa17.01■□□□□ 0.31
MIR1249-201ENST00000408671 PDE3BQ13370 1112 aa17■□□□□ 0.31
MIR1249-201ENST00000408671 CHRNA2Q15822 529 aa17■□□□□ 0.31
MIR1249-201ENST00000408671 IFFO2Q5TF58 517 aa17■□□□□ 0.31
MIR1249-201ENST00000408671 STRN4Q9NRL3 753 aa17■□□□□ 0.31
MIR1249-201ENST00000408671 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
MIR1249-201ENST00000408671 LRRC37A3O60309 1634 aa16.97■□□□□ 0.31
MIR1249-201ENST00000408671 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
MIR1249-201ENST00000408671 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
MIR1249-201ENST00000408671 POGKQ9P215 609 aa16.97■□□□□ 0.31
MIR1249-201ENST00000408671 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
MIR1249-201ENST00000408671 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
MIR1249-201ENST00000408671 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
MIR1249-201ENST00000408671 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
MIR1249-201ENST00000408671 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.3
MIR1249-201ENST00000408671 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
MIR1249-201ENST00000408671 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.3
MIR1249-201ENST00000408671 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.3
MIR1249-201ENST00000408671 CPDO75976 1380 aa16.95■□□□□ 0.3
MIR1249-201ENST00000408671 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 PLSCR1O15162 318 aa16.95■□□□□ 0.3
MIR1249-201ENST00000408671 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 PTGER2P43116 358 aa16.95■□□□□ 0.3
MIR1249-201ENST00000408671 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
MIR1249-201ENST00000408671 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
MIR1249-201ENST00000408671 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
MIR1249-201ENST00000408671 PDGFDQ9GZP0 370 aaPredicted RBP16.94■□□□□ 0.3
MIR1249-201ENST00000408671 THRAP3Q9Y2W1 955 aaKnown RBP16.94■□□□□ 0.3
MIR1249-201ENST00000408671 ZC3H6P61129 1189 aaKnown RBP16.93■□□□□ 0.3
MIR1249-201ENST00000408671 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
MIR1249-201ENST00000408671 MPHOSPH9Q99550 1183 aa16.92■□□□□ 0.3
MIR1249-201ENST00000408671 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
MIR1249-201ENST00000408671 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
MIR1249-201ENST00000408671 EVA1CP58658 441 aa16.91■□□□□ 0.3
MIR1249-201ENST00000408671 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
MIR1249-201ENST00000408671 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
MIR1249-201ENST00000408671 GOLGB1Q14789 3259 aaKnown RBP16.9■□□□□ 0.3
MIR1249-201ENST00000408671 BCL9O00512 1426 aa16.89■□□□□ 0.29
MIR1249-201ENST00000408671 ZBTB7AO95365 584 aa16.89■□□□□ 0.29
MIR1249-201ENST00000408671 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
MIR1249-201ENST00000408671 USP19O94966 1318 aa16.89■□□□□ 0.29
MIR1249-201ENST00000408671 PROM2Q8N271 834 aa16.88■□□□□ 0.29
MIR1249-201ENST00000408671 FHDC1Q9C0D6 1143 aaPredicted RBP16.88■□□□□ 0.29
MIR1249-201ENST00000408671 CRB1P82279 1406 aa16.87■□□□□ 0.29
MIR1249-201ENST00000408671 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
MIR1249-201ENST00000408671 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
MIR1249-201ENST00000408671 PTF1AQ7RTS3 328 aa16.86■□□□□ 0.29
MIR1249-201ENST00000408671 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
MIR1249-201ENST00000408671 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
MIR1249-201ENST00000408671 NUDT16Q96DE0 195 aaKnown RBP16.85■□□□□ 0.29
MIR1249-201ENST00000408671 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
MIR1249-201ENST00000408671 COL18A1P39060 1754 aa16.84■□□□□ 0.29
MIR1249-201ENST00000408671 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
MIR1249-201ENST00000408671 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
MIR1249-201ENST00000408671 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms