RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 TRAK2O60296 914 aa15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 MINK1Q8N4C8 1332 aaPredicted RBP15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 DHX57Q6P158 1386 aaKnown RBP15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 SEPT7Q16181 437 aaKnown RBP15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 NEUROD6Q96NK8 337 aa15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 POGZQ7Z3K3 1410 aa15.99■□□□□ 0.15
LDLRAD4-203ENST00000399848 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
LDLRAD4-203ENST00000399848 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
LDLRAD4-203ENST00000399848 NEFHP12036 1026 aa15.98■□□□□ 0.15
LDLRAD4-203ENST00000399848 STIM1Q13586 685 aa15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 IQCEQ6IPM2 695 aa15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 RABEP1Q15276 862 aa15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 RNF214Q8ND24 703 aa15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
LDLRAD4-203ENST00000399848 DACH1Q9UI36 760 aa15.96■□□□□ 0.15
LDLRAD4-203ENST00000399848 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
LDLRAD4-203ENST00000399848 CCDC192P0DO97 292 aa15.96■□□□□ 0.14
LDLRAD4-203ENST00000399848 IKQ13123 557 aaPredicted RBP15.95■□□□□ 0.14
LDLRAD4-203ENST00000399848 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
LDLRAD4-203ENST00000399848 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
LDLRAD4-203ENST00000399848 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
LDLRAD4-203ENST00000399848 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
LDLRAD4-203ENST00000399848 ERC1Q8IUD2 1116 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 TMEM87AQ8NBN3 555 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 FYB1O15117 783 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 ERLIN1O75477 346 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 GNAI3P08754 354 aa15.94■□□□□ 0.14
LDLRAD4-203ENST00000399848 TMEM132AQ24JP5 1023 aa15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 USP8P40818 1118 aa15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 ENOX2Q16206 610 aaKnown RBP15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 PAF1Q8N7H5 531 aa15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 EZRP15311 586 aaKnown RBP15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
LDLRAD4-203ENST00000399848 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 BRPF1P55201 1214 aaPredicted RBP15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 CCDC181Q5TID7 509 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 SPDYE4A6NLX3 237 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 SERPINC1P01008 464 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 KRT18P05783 430 aaKnown RBP15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 CCDC30Q5VVM6 783 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 SKIDA1Q1XH10 827 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
LDLRAD4-203ENST00000399848 HSP90AB3PQ58FF7 597 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 NEK4P51957 841 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 STK38Q15208 465 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 PLCD4Q9BRC7 762 aa15.91■□□□□ 0.14
LDLRAD4-203ENST00000399848 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
LDLRAD4-203ENST00000399848 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
LDLRAD4-203ENST00000399848 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD4-203ENST00000399848 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
LDLRAD4-203ENST00000399848 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 PRPF40AO75400 957 aaKnown RBP15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 SPC24Q8NBT2 197 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 CCDC112Q8NEF3 446 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 FIBPO43427 364 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
LDLRAD4-203ENST00000399848 HMOX1P09601 288 aa15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 WDR33Q9C0J8 1336 aaKnown RBP15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 GCC1Q96CN9 775 aa15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 SCAPERQ9BY12 1400 aa15.88■□□□□ 0.13
LDLRAD4-203ENST00000399848 TAF3Q5VWG9 929 aa15.87■□□□□ 0.13
LDLRAD4-203ENST00000399848 GNL3LQ9NVN8 582 aaKnown RBP15.87■□□□□ 0.13
LDLRAD4-203ENST00000399848 ANKRD62A6NC57 917 aa15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 DESP17661 470 aa15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 KRT85P78386 507 aa15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 SURF6O75683 361 aaKnown RBP15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 GNAI2P04899 355 aa15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
LDLRAD4-203ENST00000399848 ME1P48163 572 aa15.85■□□□□ 0.13
LDLRAD4-203ENST00000399848 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
LDLRAD4-203ENST00000399848 CFAP45Q9UL16 551 aa15.85■□□□□ 0.13
LDLRAD4-203ENST00000399848 PDCL3Q9H2J4 239 aa15.85■□□□□ 0.13
LDLRAD4-203ENST00000399848 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
LDLRAD4-203ENST00000399848 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 GPRASP1Q5JY77 1395 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 CDKL5O76039 1030 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 CENPHQ9H3R5 247 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
LDLRAD4-203ENST00000399848 ATP2B1P20020 1258 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms