RNA–Protein interactions for RNA: ENST00000399410.7

ABCC1-202, Transcript of ATP binding cassette subfamily C member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-202ENST00000399410 HOOK1Q9UJC3 728 aaKnown RBP18.48■□□□□ 0.55
ABCC1-202ENST00000399410 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
ABCC1-202ENST00000399410 CUL7Q14999 1698 aa18.48■□□□□ 0.55
ABCC1-202ENST00000399410 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
ABCC1-202ENST00000399410 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
ABCC1-202ENST00000399410 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
ABCC1-202ENST00000399410 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
ABCC1-202ENST00000399410 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.47■□□□□ 0.55
ABCC1-202ENST00000399410 CCDC73Q6ZRK6 1079 aa18.47■□□□□ 0.55
ABCC1-202ENST00000399410 CCDC47Q96A33 483 aaKnown RBP18.47■□□□□ 0.55
ABCC1-202ENST00000399410 ABCC5O15440 1437 aa18.47■□□□□ 0.55
ABCC1-202ENST00000399410 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
ABCC1-202ENST00000399410 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
ABCC1-202ENST00000399410 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
ABCC1-202ENST00000399410 MVPQ14764 893 aaKnown RBP18.46■□□□□ 0.55
ABCC1-202ENST00000399410 DHX16O60231 1041 aaKnown RBP18.46■□□□□ 0.55
ABCC1-202ENST00000399410 SAFBQ15424 915 aaKnown RBP eCLIP18.46■□□□□ 0.55
ABCC1-202ENST00000399410 RAD21O60216 631 aa18.46■□□□□ 0.55
ABCC1-202ENST00000399410 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
ABCC1-202ENST00000399410 RABEP1Q15276 862 aa18.46■□□□□ 0.55
ABCC1-202ENST00000399410 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
ABCC1-202ENST00000399410 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
ABCC1-202ENST00000399410 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
ABCC1-202ENST00000399410 FCHSD2O94868 740 aa18.45■□□□□ 0.54
ABCC1-202ENST00000399410 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
ABCC1-202ENST00000399410 HIP1O00291 1037 aa18.45■□□□□ 0.54
ABCC1-202ENST00000399410 ANKRD20A12PQ8NF67 263 aa18.45■□□□□ 0.54
ABCC1-202ENST00000399410 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
ABCC1-202ENST00000399410 MCM2P49736 904 aa18.44■□□□□ 0.54
ABCC1-202ENST00000399410 NEK4P51957 841 aa18.44■□□□□ 0.54
ABCC1-202ENST00000399410 FOSBP53539 338 aa18.43■□□□□ 0.54
ABCC1-202ENST00000399410 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
ABCC1-202ENST00000399410 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
ABCC1-202ENST00000399410 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
ABCC1-202ENST00000399410 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
ABCC1-202ENST00000399410 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
ABCC1-202ENST00000399410 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
ABCC1-202ENST00000399410 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
ABCC1-202ENST00000399410 BACH2Q9BYV9 841 aa18.42■□□□□ 0.54
ABCC1-202ENST00000399410 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
ABCC1-202ENST00000399410 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
ABCC1-202ENST00000399410 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
ABCC1-202ENST00000399410 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
ABCC1-202ENST00000399410 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
ABCC1-202ENST00000399410 MRE11P49959 708 aa18.4■□□□□ 0.54
ABCC1-202ENST00000399410 ZNF592Q92610 1267 aa18.4■□□□□ 0.54
ABCC1-202ENST00000399410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.39■□□□□ 0.54
ABCC1-202ENST00000399410 PDE4CQ08493 712 aa18.39■□□□□ 0.54
ABCC1-202ENST00000399410 GRIN2AQ12879 1464 aa18.39■□□□□ 0.54
ABCC1-202ENST00000399410 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
ABCC1-202ENST00000399410 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
ABCC1-202ENST00000399410 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
ABCC1-202ENST00000399410 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
ABCC1-202ENST00000399410 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
ABCC1-202ENST00000399410 PCMTD1Q96MG8 357 aaPredicted RBP18.39■□□□□ 0.53
ABCC1-202ENST00000399410 KIF14Q15058 1648 aa18.39■□□□□ 0.53
ABCC1-202ENST00000399410 POGZQ7Z3K3 1410 aa18.38■□□□□ 0.53
ABCC1-202ENST00000399410 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
ABCC1-202ENST00000399410 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
ABCC1-202ENST00000399410 TRAK2O60296 914 aa18.38■□□□□ 0.53
ABCC1-202ENST00000399410 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
ABCC1-202ENST00000399410 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
ABCC1-202ENST00000399410 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
ABCC1-202ENST00000399410 MBD3O95983 291 aa18.37■□□□□ 0.53
ABCC1-202ENST00000399410 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
ABCC1-202ENST00000399410 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
ABCC1-202ENST00000399410 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
ABCC1-202ENST00000399410 PDCP20941 246 aa18.37■□□□□ 0.53
ABCC1-202ENST00000399410 CABP4P57796 275 aa18.36■□□□□ 0.53
ABCC1-202ENST00000399410 FYB1O15117 783 aa18.36■□□□□ 0.53
ABCC1-202ENST00000399410 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-202ENST00000399410 XBP1P17861 261 aa18.36■□□□□ 0.53
ABCC1-202ENST00000399410 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
ABCC1-202ENST00000399410 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
ABCC1-202ENST00000399410 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
ABCC1-202ENST00000399410 CCDC70Q6NSX1 233 aa18.35■□□□□ 0.53
ABCC1-202ENST00000399410 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
ABCC1-202ENST00000399410 CD109Q6YHK3 1445 aa18.35■□□□□ 0.53
ABCC1-202ENST00000399410 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
ABCC1-202ENST00000399410 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
ABCC1-202ENST00000399410 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
ABCC1-202ENST00000399410 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
ABCC1-202ENST00000399410 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
ABCC1-202ENST00000399410 SDF4Q9BRK5 362 aa18.34■□□□□ 0.53
ABCC1-202ENST00000399410 NAT10Q9H0A0 1025 aaKnown RBP18.34■□□□□ 0.53
ABCC1-202ENST00000399410 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.53
ABCC1-202ENST00000399410 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.53
ABCC1-202ENST00000399410 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.53
ABCC1-202ENST00000399410 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.53
ABCC1-202ENST00000399410 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
ABCC1-202ENST00000399410 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
ABCC1-202ENST00000399410 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
ABCC1-202ENST00000399410 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
ABCC1-202ENST00000399410 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
ABCC1-202ENST00000399410 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms