RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
ABCC1-201ENST00000399408 CUL7Q14999 1698 aa18.48■□□□□ 0.55
ABCC1-201ENST00000399408 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
ABCC1-201ENST00000399408 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
ABCC1-201ENST00000399408 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
ABCC1-201ENST00000399408 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
ABCC1-201ENST00000399408 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
ABCC1-201ENST00000399408 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.47■□□□□ 0.55
ABCC1-201ENST00000399408 CCDC73Q6ZRK6 1079 aa18.47■□□□□ 0.55
ABCC1-201ENST00000399408 CCDC47Q96A33 483 aaKnown RBP18.47■□□□□ 0.55
ABCC1-201ENST00000399408 ABCC5O15440 1437 aa18.47■□□□□ 0.55
ABCC1-201ENST00000399408 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
ABCC1-201ENST00000399408 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
ABCC1-201ENST00000399408 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
ABCC1-201ENST00000399408 MVPQ14764 893 aaKnown RBP18.46■□□□□ 0.55
ABCC1-201ENST00000399408 DHX16O60231 1041 aaKnown RBP18.46■□□□□ 0.55
ABCC1-201ENST00000399408 SAFBQ15424 915 aaKnown RBP eCLIP18.46■□□□□ 0.55
ABCC1-201ENST00000399408 RAD21O60216 631 aa18.46■□□□□ 0.55
ABCC1-201ENST00000399408 TATP17735 454 aaPredicted RBP18.46■□□□□ 0.55
ABCC1-201ENST00000399408 RABEP1Q15276 862 aa18.46■□□□□ 0.55
ABCC1-201ENST00000399408 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
ABCC1-201ENST00000399408 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
ABCC1-201ENST00000399408 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
ABCC1-201ENST00000399408 FCHSD2O94868 740 aa18.45■□□□□ 0.54
ABCC1-201ENST00000399408 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
ABCC1-201ENST00000399408 HIP1O00291 1037 aa18.45■□□□□ 0.54
ABCC1-201ENST00000399408 ANKRD20A12PQ8NF67 263 aa18.45■□□□□ 0.54
ABCC1-201ENST00000399408 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
ABCC1-201ENST00000399408 MCM2P49736 904 aa18.44■□□□□ 0.54
ABCC1-201ENST00000399408 NEK4P51957 841 aa18.44■□□□□ 0.54
ABCC1-201ENST00000399408 FOSBP53539 338 aa18.43■□□□□ 0.54
ABCC1-201ENST00000399408 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
ABCC1-201ENST00000399408 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
ABCC1-201ENST00000399408 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
ABCC1-201ENST00000399408 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
ABCC1-201ENST00000399408 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
ABCC1-201ENST00000399408 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
ABCC1-201ENST00000399408 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
ABCC1-201ENST00000399408 BACH2Q9BYV9 841 aa18.42■□□□□ 0.54
ABCC1-201ENST00000399408 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
ABCC1-201ENST00000399408 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
ABCC1-201ENST00000399408 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
ABCC1-201ENST00000399408 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
ABCC1-201ENST00000399408 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
ABCC1-201ENST00000399408 MRE11P49959 708 aa18.4■□□□□ 0.54
ABCC1-201ENST00000399408 ZNF592Q92610 1267 aa18.4■□□□□ 0.54
ABCC1-201ENST00000399408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.39■□□□□ 0.54
ABCC1-201ENST00000399408 PDE4CQ08493 712 aa18.39■□□□□ 0.54
ABCC1-201ENST00000399408 GRIN2AQ12879 1464 aa18.39■□□□□ 0.54
ABCC1-201ENST00000399408 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
ABCC1-201ENST00000399408 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
ABCC1-201ENST00000399408 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
ABCC1-201ENST00000399408 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
ABCC1-201ENST00000399408 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
ABCC1-201ENST00000399408 PCMTD1Q96MG8 357 aaPredicted RBP18.39■□□□□ 0.53
ABCC1-201ENST00000399408 KIF14Q15058 1648 aa18.39■□□□□ 0.53
ABCC1-201ENST00000399408 POGZQ7Z3K3 1410 aa18.38■□□□□ 0.53
ABCC1-201ENST00000399408 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
ABCC1-201ENST00000399408 CCDC61Q9Y6R9 512 aa18.38■□□□□ 0.53
ABCC1-201ENST00000399408 TRAK2O60296 914 aa18.38■□□□□ 0.53
ABCC1-201ENST00000399408 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
ABCC1-201ENST00000399408 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
ABCC1-201ENST00000399408 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
ABCC1-201ENST00000399408 MBD3O95983 291 aa18.37■□□□□ 0.53
ABCC1-201ENST00000399408 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
ABCC1-201ENST00000399408 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
ABCC1-201ENST00000399408 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
ABCC1-201ENST00000399408 PDCP20941 246 aa18.37■□□□□ 0.53
ABCC1-201ENST00000399408 CABP4P57796 275 aa18.36■□□□□ 0.53
ABCC1-201ENST00000399408 FYB1O15117 783 aa18.36■□□□□ 0.53
ABCC1-201ENST00000399408 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-201ENST00000399408 XBP1P17861 261 aa18.36■□□□□ 0.53
ABCC1-201ENST00000399408 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
ABCC1-201ENST00000399408 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
ABCC1-201ENST00000399408 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
ABCC1-201ENST00000399408 CCDC70Q6NSX1 233 aa18.35■□□□□ 0.53
ABCC1-201ENST00000399408 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
ABCC1-201ENST00000399408 CD109Q6YHK3 1445 aa18.35■□□□□ 0.53
ABCC1-201ENST00000399408 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
ABCC1-201ENST00000399408 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
ABCC1-201ENST00000399408 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
ABCC1-201ENST00000399408 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
ABCC1-201ENST00000399408 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
ABCC1-201ENST00000399408 SDF4Q9BRK5 362 aa18.34■□□□□ 0.53
ABCC1-201ENST00000399408 NAT10Q9H0A0 1025 aaKnown RBP18.34■□□□□ 0.53
ABCC1-201ENST00000399408 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.53
ABCC1-201ENST00000399408 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.53
ABCC1-201ENST00000399408 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.53
ABCC1-201ENST00000399408 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.53
ABCC1-201ENST00000399408 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
ABCC1-201ENST00000399408 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
ABCC1-201ENST00000399408 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
ABCC1-201ENST00000399408 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
ABCC1-201ENST00000399408 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
ABCC1-201ENST00000399408 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms