RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 MYO6Q9UM54 1294 aa19.22■□□□□ 0.67
ITSN1-209ENST00000399352 TCP11L2Q8N4U5 519 aa19.22■□□□□ 0.67
ITSN1-209ENST00000399352 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
ITSN1-209ENST00000399352 BCAR3O75815 825 aa19.22■□□□□ 0.67
ITSN1-209ENST00000399352 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
ITSN1-209ENST00000399352 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
ITSN1-209ENST00000399352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.21■□□□□ 0.67
ITSN1-209ENST00000399352 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
ITSN1-209ENST00000399352 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
ITSN1-209ENST00000399352 CLASRPQ8N2M8 674 aaKnown RBP19.21■□□□□ 0.67
ITSN1-209ENST00000399352 CWC22Q9HCG8 908 aaKnown RBP19.21■□□□□ 0.67
ITSN1-209ENST00000399352 XBP1P17861 261 aa19.2■□□□□ 0.66
ITSN1-209ENST00000399352 FAM193AP78312 1265 aa19.2■□□□□ 0.66
ITSN1-209ENST00000399352 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
ITSN1-209ENST00000399352 RIC3Q7Z5B4 369 aa19.19■□□□□ 0.66
ITSN1-209ENST00000399352 ZNF396Q96N95 335 aaPredicted RBP19.19■□□□□ 0.66
ITSN1-209ENST00000399352 STK3Q13188 491 aa19.19■□□□□ 0.66
ITSN1-209ENST00000399352 ZSCAN30Q86W11 494 aa19.19■□□□□ 0.66
ITSN1-209ENST00000399352 ERLIN1O75477 346 aa19.18■□□□□ 0.66
ITSN1-209ENST00000399352 MAGEC2Q9UBF1 373 aaPredicted RBP19.18■□□□□ 0.66
ITSN1-209ENST00000399352 GOLGA6L10A6NI86 522 aa19.18■□□□□ 0.66
ITSN1-209ENST00000399352 EIF3JO75822 258 aaKnown RBP19.18■□□□□ 0.66
ITSN1-209ENST00000399352 CBX1P83916 185 aa19.18■□□□□ 0.66
ITSN1-209ENST00000399352 DNAJC2Q99543 621 aaKnown RBP19.18■□□□□ 0.66
ITSN1-209ENST00000399352 CENPHQ9H3R5 247 aa19.18■□□□□ 0.66
ITSN1-209ENST00000399352 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
ITSN1-209ENST00000399352 WDR33Q9C0J8 1336 aaKnown RBP19.18■□□□□ 0.66
ITSN1-209ENST00000399352 STK11IPQ8N1F8 1099 aa19.17■□□□□ 0.66
ITSN1-209ENST00000399352 ME1P48163 572 aa19.17■□□□□ 0.66
ITSN1-209ENST00000399352 PPFIBP1Q86W92 1011 aa19.17■□□□□ 0.66
ITSN1-209ENST00000399352 NEFHP12036 1026 aa19.16■□□□□ 0.66
ITSN1-209ENST00000399352 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
ITSN1-209ENST00000399352 GCC1Q96CN9 775 aa19.16■□□□□ 0.66
ITSN1-209ENST00000399352 MSH5O43196 834 aa19.16■□□□□ 0.66
ITSN1-209ENST00000399352 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
ITSN1-209ENST00000399352 MTHFSP49914 203 aa19.15■□□□□ 0.66
ITSN1-209ENST00000399352 ZNHIT6Q9NWK9 470 aaKnown RBP19.15■□□□□ 0.66
ITSN1-209ENST00000399352 DEF6Q9H4E7 631 aa19.15■□□□□ 0.66
ITSN1-209ENST00000399352 KRT85P78386 507 aa19.15■□□□□ 0.66
ITSN1-209ENST00000399352 CCDC181Q5TID7 509 aa19.15■□□□□ 0.66
ITSN1-209ENST00000399352 GNAI3P08754 354 aa19.15■□□□□ 0.66
ITSN1-209ENST00000399352 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
ITSN1-209ENST00000399352 CYP46A1Q9Y6A2 500 aa19.14■□□□□ 0.65
ITSN1-209ENST00000399352 SYCE3A1L190 88 aa19.13■□□□□ 0.65
ITSN1-209ENST00000399352 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
ITSN1-209ENST00000399352 GOLGA6L7A0A1B0GV03 622 aa19.13■□□□□ 0.65
ITSN1-209ENST00000399352 EVA1CP58658 441 aa19.13■□□□□ 0.65
ITSN1-209ENST00000399352 TAX1BP1Q86VP1 789 aa19.13■□□□□ 0.65
ITSN1-209ENST00000399352 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
ITSN1-209ENST00000399352 LARP1BQ659C4 914 aaKnown RBP19.12■□□□□ 0.65
ITSN1-209ENST00000399352 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
ITSN1-209ENST00000399352 USP8P40818 1118 aa19.12■□□□□ 0.65
ITSN1-209ENST00000399352 AEBP1Q8IUX7 1158 aa19.12■□□□□ 0.65
ITSN1-209ENST00000399352 ERLIN2O94905 339 aa19.12■□□□□ 0.65
ITSN1-209ENST00000399352 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
ITSN1-209ENST00000399352 SART3Q15020 963 aaKnown RBP19.11■□□□□ 0.65
ITSN1-209ENST00000399352 UBXN4Q92575 508 aa19.11■□□□□ 0.65
ITSN1-209ENST00000399352 NACADO15069 1562 aa19.11■□□□□ 0.65
ITSN1-209ENST00000399352 PIP4K2AP48426 406 aaPredicted RBP19.11■□□□□ 0.65
ITSN1-209ENST00000399352 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
ITSN1-209ENST00000399352 TXLNAP40222 546 aa19.11■□□□□ 0.65
ITSN1-209ENST00000399352 ENOX2Q16206 610 aaKnown RBP19.11■□□□□ 0.65
ITSN1-209ENST00000399352 TAF3Q5VWG9 929 aa19.11■□□□□ 0.65
ITSN1-209ENST00000399352 JMYQ8N9B5 988 aa19.1■□□□□ 0.65
ITSN1-209ENST00000399352 DHX8Q14562 1220 aaKnown RBP19.1■□□□□ 0.65
ITSN1-209ENST00000399352 TRERF1Q96PN7 1200 aa19.1■□□□□ 0.65
ITSN1-209ENST00000399352 NUP62CLQ9H1M0 184 aa19.1■□□□□ 0.65
ITSN1-209ENST00000399352 CIZ1Q9ULV3 898 aaPredicted RBP19.1■□□□□ 0.65
ITSN1-209ENST00000399352 CDK5RAP3Q96JB5 506 aa19.1■□□□□ 0.65
ITSN1-209ENST00000399352 SPATA32Q96LK8 384 aa19.1■□□□□ 0.65
ITSN1-209ENST00000399352 LRRFIP2Q9Y608 721 aaKnown RBP19.1■□□□□ 0.65
ITSN1-209ENST00000399352 ANKRD62A6NC57 917 aa19.09■□□□□ 0.65
ITSN1-209ENST00000399352 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
ITSN1-209ENST00000399352 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
ITSN1-209ENST00000399352 LRRCC1Q9C099 1032 aa19.09■□□□□ 0.65
ITSN1-209ENST00000399352 IBSPP21815 317 aaPredicted RBP19.08■□□□□ 0.65
ITSN1-209ENST00000399352 HIP1O00291 1037 aa19.08■□□□□ 0.65
ITSN1-209ENST00000399352 CABP2Q9NPB3 220 aa19.08■□□□□ 0.65
ITSN1-209ENST00000399352 CEP57L1Q8IYX8 460 aa19.08■□□□□ 0.64
ITSN1-209ENST00000399352 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
ITSN1-209ENST00000399352 TMCO3Q6UWJ1 677 aa19.07■□□□□ 0.64
ITSN1-209ENST00000399352 CCAR1Q8IX12 1150 aaKnown RBP19.07■□□□□ 0.64
ITSN1-209ENST00000399352 CBFA2T2O43439 604 aa19.07■□□□□ 0.64
ITSN1-209ENST00000399352 GNAI2P04899 355 aa19.07■□□□□ 0.64
ITSN1-209ENST00000399352 UPF3BQ9BZI7 483 aaKnown RBP19.07■□□□□ 0.64
ITSN1-209ENST00000399352 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 SYCP1Q15431 976 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 CGNQ9P2M7 1197 aaKnown RBP19.06■□□□□ 0.64
ITSN1-209ENST00000399352 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 DACH1Q9UI36 760 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 SEPT7Q16181 437 aaKnown RBP19.06■□□□□ 0.64
ITSN1-209ENST00000399352 CHD1LQ86WJ1 897 aa19.06■□□□□ 0.64
ITSN1-209ENST00000399352 KRT18P05783 430 aaKnown RBP19.05■□□□□ 0.64
ITSN1-209ENST00000399352 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
ITSN1-209ENST00000399352 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
ITSN1-209ENST00000399352 CAMK4Q16566 473 aa19.05■□□□□ 0.64
ITSN1-209ENST00000399352 TANGO6Q9C0B7 1094 aa19.05■□□□□ 0.64
ITSN1-209ENST00000399352 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
ITSN1-209ENST00000399352 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms