RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 KIF1AQ12756 1690 aa24.7■■□□□ 1.54
MBD1-208ENST00000398493 A0A1W2PP64 1363 aa24.7■■□□□ 1.54
MBD1-208ENST00000398493 NINLQ9Y2I6 1382 aa24.69■■□□□ 1.54
MBD1-208ENST00000398493 PARD3Q8TEW0 1356 aa24.69■■□□□ 1.54
MBD1-208ENST00000398493 SOS2Q07890 1332 aaPredicted RBP24.69■■□□□ 1.54
MBD1-208ENST00000398493 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
MBD1-208ENST00000398493 PXDNQ92626 1479 aa24.67■■□□□ 1.54
MBD1-208ENST00000398493 HSPA1LP34931 641 aa24.67■■□□□ 1.54
MBD1-208ENST00000398493 KNSTRNQ9Y448 316 aa24.67■■□□□ 1.54
MBD1-208ENST00000398493 NHSL1Q5SYE7 1610 aa24.67■■□□□ 1.54
MBD1-208ENST00000398493 ANKRD36BQ8N2N9 1353 aa24.66■■□□□ 1.54
MBD1-208ENST00000398493 PNISRQ8TF01 805 aaKnown RBP24.66■■□□□ 1.54
MBD1-208ENST00000398493 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
MBD1-208ENST00000398493 TERF2IPQ9NYB0 399 aa24.66■■□□□ 1.54
MBD1-208ENST00000398493 AHDC1Q5TGY3 1603 aaPredicted RBP24.66■■□□□ 1.54
MBD1-208ENST00000398493 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
MBD1-208ENST00000398493 HDGFL2Q7Z4V5 671 aaPredicted RBP24.65■■□□□ 1.54
MBD1-208ENST00000398493 ZNF692Q9BU19 519 aaPredicted RBP24.65■■□□□ 1.54
MBD1-208ENST00000398493 USP6P35125 1406 aa24.65■■□□□ 1.54
MBD1-208ENST00000398493 NEFLP07196 543 aa24.65■■□□□ 1.54
MBD1-208ENST00000398493 SSH2Q76I76 1423 aa24.63■■□□□ 1.53
MBD1-208ENST00000398493 PAK3O75914 559 aaPredicted RBP24.62■■□□□ 1.53
MBD1-208ENST00000398493 CC2D1BQ5T0F9 858 aaKnown RBP24.62■■□□□ 1.53
MBD1-208ENST00000398493 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
MBD1-208ENST00000398493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.61■■□□□ 1.53
MBD1-208ENST00000398493 AKAP12Q02952 1782 aa24.6■■□□□ 1.53
MBD1-208ENST00000398493 PHLPP1O60346 1717 aa24.6■■□□□ 1.53
MBD1-208ENST00000398493 TTC21BQ7Z4L5 1316 aa24.6■■□□□ 1.53
MBD1-208ENST00000398493 COL16A1Q07092 1604 aaPredicted RBP24.6■■□□□ 1.53
MBD1-208ENST00000398493 SPATA31A3Q5VYP0 1347 aa24.58■■□□□ 1.53
MBD1-208ENST00000398493 SBNO1A3KN83 1393 aa24.58■■□□□ 1.53
MBD1-208ENST00000398493 LRRC59Q96AG4 307 aaKnown RBP24.58■■□□□ 1.53
MBD1-208ENST00000398493 MON2Q7Z3U7 1717 aa24.57■■□□□ 1.52
MBD1-208ENST00000398493 TRPM3Q9HCF6 1732 aaPredicted RBP24.57■■□□□ 1.52
MBD1-208ENST00000398493 NSD3Q9BZ95 1437 aa24.57■■□□□ 1.52
MBD1-208ENST00000398493 LMOD2Q6P5Q4 547 aa24.56■■□□□ 1.52
MBD1-208ENST00000398493 EDC4Q6P2E9 1401 aaKnown RBP24.56■■□□□ 1.52
MBD1-208ENST00000398493 NUTM2GQ5VZR2 741 aa24.56■■□□□ 1.52
MBD1-208ENST00000398493 ZRANB1Q9UGI0 708 aa24.56■■□□□ 1.52
MBD1-208ENST00000398493 NME9Q86XW9 330 aa24.55■■□□□ 1.52
MBD1-208ENST00000398493 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
MBD1-208ENST00000398493 NPC1L1Q9UHC9 1359 aa24.55■■□□□ 1.52
MBD1-208ENST00000398493 NRKQ7Z2Y5 1582 aa24.55■■□□□ 1.52
MBD1-208ENST00000398493 ABTB2Q8N961 1025 aa24.54■■□□□ 1.52
MBD1-208ENST00000398493 PLEKHG5O94827 1062 aa24.53■■□□□ 1.52
MBD1-208ENST00000398493 FKBP8Q14318 412 aa24.52■■□□□ 1.52
MBD1-208ENST00000398493 AMER1Q5JTC6 1135 aaPredicted RBP24.51■■□□□ 1.51
MBD1-208ENST00000398493 FYB1O15117 783 aa24.51■■□□□ 1.51
MBD1-208ENST00000398493 TTC21AQ8NDW8 1320 aa24.5■■□□□ 1.51
MBD1-208ENST00000398493 PNPLA6Q8IY17 1366 aa24.5■■□□□ 1.51
MBD1-208ENST00000398493 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
MBD1-208ENST00000398493 CABLES1Q8TDN4 633 aa24.49■■□□□ 1.51
MBD1-208ENST00000398493 NLRP6P59044 892 aa24.49■■□□□ 1.51
MBD1-208ENST00000398493 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
MBD1-208ENST00000398493 PIK3C2AO00443 1686 aa24.47■■□□□ 1.51
MBD1-208ENST00000398493 ARHGEF10O15013 1369 aa24.47■■□□□ 1.51
MBD1-208ENST00000398493 JCADQ9P266 1359 aa24.47■■□□□ 1.51
MBD1-208ENST00000398493 INSRP06213 1382 aa24.46■■□□□ 1.51
MBD1-208ENST00000398493 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
MBD1-208ENST00000398493 PPP2R1AP30153 589 aa24.44■■□□□ 1.5
MBD1-208ENST00000398493 USP31Q70CQ4 1352 aa24.44■■□□□ 1.5
MBD1-208ENST00000398493 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
MBD1-208ENST00000398493 OVOS2A0A0J9YW53 1432 aa24.42■■□□□ 1.5
MBD1-208ENST00000398493 OVOS2Q6IE36 1432 aa24.42■■□□□ 1.5
MBD1-208ENST00000398493 FBLN1P23142 703 aa24.41■■□□□ 1.5
MBD1-208ENST00000398493 USP19O94966 1318 aa24.41■■□□□ 1.5
MBD1-208ENST00000398493 SOX12O15370 315 aa24.4■■□□□ 1.5
MBD1-208ENST00000398493 COG3Q96JB2 828 aa24.4■■□□□ 1.5
MBD1-208ENST00000398493 SMG6Q86US8 1419 aaKnown RBP24.39■■□□□ 1.5
MBD1-208ENST00000398493 NUTM2BA6NNL0 878 aaPredicted RBP24.39■■□□□ 1.49
MBD1-208ENST00000398493 NUTM2EB1AL46 878 aaPredicted RBP24.39■■□□□ 1.49
MBD1-208ENST00000398493 NUTM2AQ8IVF1 878 aaPredicted RBP24.39■■□□□ 1.49
MBD1-208ENST00000398493 MARF1Q9Y4F3 1742 aaKnown RBP24.39■■□□□ 1.49
MBD1-208ENST00000398493 SHPRHQ149N8 1683 aa24.39■■□□□ 1.49
MBD1-208ENST00000398493 COL22A1Q8NFW1 1626 aaPredicted RBP24.38■■□□□ 1.49
MBD1-208ENST00000398493 GCP02774 474 aa24.38■■□□□ 1.49
MBD1-208ENST00000398493 NUDCQ9Y266 331 aa24.37■■□□□ 1.49
MBD1-208ENST00000398493 KIF20BQ96Q89 1820 aa24.36■■□□□ 1.49
MBD1-208ENST00000398493 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
MBD1-208ENST00000398493 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
MBD1-208ENST00000398493 ERICH6BQ5W0A0 696 aa24.35■■□□□ 1.49
MBD1-208ENST00000398493 CRYBG1Q9Y4K1 1723 aa24.34■■□□□ 1.49
MBD1-208ENST00000398493 SLIT3O75094 1523 aa24.34■■□□□ 1.49
MBD1-208ENST00000398493 LRP6O75581 1613 aa24.34■■□□□ 1.49
MBD1-208ENST00000398493 TNNT2P45379 298 aaPredicted RBP24.33■■□□□ 1.49
MBD1-208ENST00000398493 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
MBD1-208ENST00000398493 ZC3H6P61129 1189 aaKnown RBP24.33■■□□□ 1.49
MBD1-208ENST00000398493 PDE3BQ13370 1112 aa24.33■■□□□ 1.49
MBD1-208ENST00000398493 NSD2O96028 1365 aa24.33■■□□□ 1.49
MBD1-208ENST00000398493 ADAMTS2O95450 1211 aa24.33■■□□□ 1.48
MBD1-208ENST00000398493 MORC1Q86VD1 984 aa24.33■■□□□ 1.48
MBD1-208ENST00000398493 USP54Q70EL1 1684 aa24.32■■□□□ 1.48
MBD1-208ENST00000398493 PHRF1Q9P1Y6 1649 aaKnown RBP24.31■■□□□ 1.48
MBD1-208ENST00000398493 ABCA3Q99758 1704 aa24.31■■□□□ 1.48
MBD1-208ENST00000398493 KCNH5Q8NCM2 988 aa24.31■■□□□ 1.48
MBD1-208ENST00000398493 BLMP54132 1417 aaPredicted RBP24.3■■□□□ 1.48
MBD1-208ENST00000398493 NFAT5O94916 1531 aa24.29■■□□□ 1.48
MBD1-208ENST00000398493 KIAA0232Q92628 1395 aa24.29■■□□□ 1.48
MBD1-208ENST00000398493 RRS1Q15050 365 aaKnown RBP24.28■■□□□ 1.48
MBD1-208ENST00000398493 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms