RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 CABLES1Q8TDN4 633 aa27.08■■□□□ 1.93
GPM6B-204ENST00000398361 NUDT16Q96DE0 195 aaKnown RBP27.08■■□□□ 1.93
GPM6B-204ENST00000398361 UNC5CLQ8IV45 518 aa27.07■■□□□ 1.92
GPM6B-204ENST00000398361 ATAD2Q6PL18 1390 aa27.06■■□□□ 1.92
GPM6B-204ENST00000398361 TOPAZ1Q8N9V7 1692 aa27.05■■□□□ 1.92
GPM6B-204ENST00000398361 GJD4Q96KN9 370 aaPredicted RBP27.05■■□□□ 1.92
GPM6B-204ENST00000398361 SRPK2P78362 688 aaKnown RBP27.04■■□□□ 1.92
GPM6B-204ENST00000398361 NGDNQ8NEJ9 315 aaKnown RBP27.04■■□□□ 1.92
GPM6B-204ENST00000398361 EVC2Q86UK5 1308 aa27.03■■□□□ 1.92
GPM6B-204ENST00000398361 SBNO2Q9Y2G9 1366 aa27.03■■□□□ 1.92
GPM6B-204ENST00000398361 GLI3P10071 1580 aa27.02■■□□□ 1.92
GPM6B-204ENST00000398361 CABP2Q9NPB3 220 aa27.01■■□□□ 1.91
GPM6B-204ENST00000398361 CCDC61Q9Y6R9 512 aa27.01■■□□□ 1.91
GPM6B-204ENST00000398361 CRYBG1Q9Y4K1 1723 aa27■■□□□ 1.91
GPM6B-204ENST00000398361 BRWD3Q6RI45 1802 aa26.97■■□□□ 1.91
GPM6B-204ENST00000398361 COL14A1Q05707 1796 aaKnown RBP26.97■■□□□ 1.91
GPM6B-204ENST00000398361 PAK3O75914 559 aaPredicted RBP26.97■■□□□ 1.91
GPM6B-204ENST00000398361 NRAPQ86VF7 1730 aa26.96■■□□□ 1.91
GPM6B-204ENST00000398361 PLEKHG3A1L390 1219 aa26.96■■□□□ 1.91
GPM6B-204ENST00000398361 VPS72Q15906 364 aa26.95■■□□□ 1.9
GPM6B-204ENST00000398361 USP47Q96K76 1375 aa26.95■■□□□ 1.9
GPM6B-204ENST00000398361 PPIP5K1Q6PFW1 1433 aa26.94■■□□□ 1.9
GPM6B-204ENST00000398361 ST20-MTHFSA0A0A6YYL1 179 aa26.94■■□□□ 1.9
GPM6B-204ENST00000398361 FAM83GA6ND36 823 aa26.94■■□□□ 1.9
GPM6B-204ENST00000398361 POLR3AO14802 1390 aaPredicted RBP26.94■■□□□ 1.9
GPM6B-204ENST00000398361 CCDC9Q9Y3X0 531 aaKnown RBP26.92■■□□□ 1.9
GPM6B-204ENST00000398361 ACEP12821 1306 aa26.91■■□□□ 1.9
GPM6B-204ENST00000398361 PHRF1Q9P1Y6 1649 aaKnown RBP26.91■■□□□ 1.9
GPM6B-204ENST00000398361 TESK2Q96S53 571 aa26.9■■□□□ 1.9
GPM6B-204ENST00000398361 SRCAPQ6ZRS2 3230 aa26.9■■□□□ 1.9
GPM6B-204ENST00000398361 SLC24A1O60721 1099 aa26.89■■□□□ 1.9
GPM6B-204ENST00000398361 CABP1Q9NZU7 370 aa26.88■■□□□ 1.89
GPM6B-204ENST00000398361 BTG4Q9NY30 223 aa26.87■■□□□ 1.89
GPM6B-204ENST00000398361 SEPT12Q8IYM1 358 aa26.85■■□□□ 1.89
GPM6B-204ENST00000398361 CCDC125Q86Z20 511 aa26.84■■□□□ 1.89
GPM6B-204ENST00000398361 PUS7Q96PZ0 661 aaKnown RBP26.84■■□□□ 1.89
GPM6B-204ENST00000398361 PRDM11Q9NQV5 511 aa26.83■■□□□ 1.89
GPM6B-204ENST00000398361 ONECUT3O60422 494 aaPredicted RBP26.82■■□□□ 1.88
GPM6B-204ENST00000398361 EP400Q96L91 3159 aa26.81■■□□□ 1.88
GPM6B-204ENST00000398361 BRD4O60885 1362 aaPredicted RBP26.81■■□□□ 1.88
GPM6B-204ENST00000398361 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
GPM6B-204ENST00000398361 NUTM2GQ5VZR2 741 aa26.8■■□□□ 1.88
GPM6B-204ENST00000398361 KIAA0232Q92628 1395 aa26.79■■□□□ 1.88
GPM6B-204ENST00000398361 USP6P35125 1406 aa26.79■■□□□ 1.88
GPM6B-204ENST00000398361 TMF1P82094 1093 aa26.78■■□□□ 1.88
GPM6B-204ENST00000398361 NRKQ7Z2Y5 1582 aa26.78■■□□□ 1.88
GPM6B-204ENST00000398361 A0A0G2JS52 829 aa26.77■■□□□ 1.88
GPM6B-204ENST00000398361 MYT1Q01538 1121 aa26.77■■□□□ 1.88
GPM6B-204ENST00000398361 ABTB2Q8N961 1025 aa26.77■■□□□ 1.88
GPM6B-204ENST00000398361 ZNF692Q9BU19 519 aaPredicted RBP26.77■■□□□ 1.88
GPM6B-204ENST00000398361 BLMP54132 1417 aaPredicted RBP26.76■■□□□ 1.87
GPM6B-204ENST00000398361 KRT27Q7Z3Y8 459 aa26.76■■□□□ 1.87
GPM6B-204ENST00000398361 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
GPM6B-204ENST00000398361 EIF4G2P78344 907 aaKnown RBP eCLIP26.75■■□□□ 1.87
GPM6B-204ENST00000398361 FAM98CQ17RN3 349 aaKnown RBP26.75■■□□□ 1.87
GPM6B-204ENST00000398361 SPATA31A5Q5VU36 1347 aa26.74■■□□□ 1.87
GPM6B-204ENST00000398361 SPATA31A7Q8IWB4 1347 aa26.74■■□□□ 1.87
GPM6B-204ENST00000398361 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
GPM6B-204ENST00000398361 CHRNA2Q15822 529 aa26.74■■□□□ 1.87
GPM6B-204ENST00000398361 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
GPM6B-204ENST00000398361 MON2Q7Z3U7 1717 aa26.73■■□□□ 1.87
GPM6B-204ENST00000398361 SSH2Q76I76 1423 aa26.73■■□□□ 1.87
GPM6B-204ENST00000398361 THSD7AQ9UPZ6 1657 aa26.72■■□□□ 1.87
GPM6B-204ENST00000398361 NINLQ9Y2I6 1382 aa26.71■■□□□ 1.87
GPM6B-204ENST00000398361 USP19O94966 1318 aa26.71■■□□□ 1.87
GPM6B-204ENST00000398361 CDCA8Q53HL2 280 aa26.71■■□□□ 1.87
GPM6B-204ENST00000398361 NLRP13Q86W25 1043 aa26.71■■□□□ 1.87
GPM6B-204ENST00000398361 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
GPM6B-204ENST00000398361 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
GPM6B-204ENST00000398361 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.87
GPM6B-204ENST00000398361 HSPA5P11021 654 aaKnown RBP26.7■■□□□ 1.86
GPM6B-204ENST00000398361 SF3B2Q13435 895 aaKnown RBP26.7■■□□□ 1.86
GPM6B-204ENST00000398361 STRN4Q9NRL3 753 aa26.69■■□□□ 1.86
GPM6B-204ENST00000398361 HDGFL2Q7Z4V5 671 aaPredicted RBP26.68■■□□□ 1.86
GPM6B-204ENST00000398361 TERF2IPQ9NYB0 399 aa26.68■■□□□ 1.86
GPM6B-204ENST00000398361 LMO7Q8WWI1 1683 aa26.68■■□□□ 1.86
GPM6B-204ENST00000398361 CPDO75976 1380 aa26.68■■□□□ 1.86
GPM6B-204ENST00000398361 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
GPM6B-204ENST00000398361 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
GPM6B-204ENST00000398361 SPATA31A1Q5TZJ5 1347 aa26.66■■□□□ 1.86
GPM6B-204ENST00000398361 PIK3C2AO00443 1686 aa26.66■■□□□ 1.86
GPM6B-204ENST00000398361 TTC21AQ8NDW8 1320 aa26.65■■□□□ 1.86
GPM6B-204ENST00000398361 RGPD1P0DJD0 1748 aa26.65■■□□□ 1.86
GPM6B-204ENST00000398361 EVA1CP58658 441 aa26.65■■□□□ 1.86
GPM6B-204ENST00000398361 CAMTA1Q9Y6Y1 1673 aa26.65■■□□□ 1.86
GPM6B-204ENST00000398361 A0A1W2PP64 1363 aa26.64■■□□□ 1.86
GPM6B-204ENST00000398361 GCP02774 474 aa26.64■■□□□ 1.86
GPM6B-204ENST00000398361 SLIT3O75094 1523 aa26.62■■□□□ 1.85
GPM6B-204ENST00000398361 NLRP6P59044 892 aa26.62■■□□□ 1.85
GPM6B-204ENST00000398361 DEFB132Q7Z7B7 95 aa26.61■■□□□ 1.85
GPM6B-204ENST00000398361 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
GPM6B-204ENST00000398361 MYOM1P52179 1685 aa26.6■■□□□ 1.85
GPM6B-204ENST00000398361 ANKRD36BQ8N2N9 1353 aa26.58■■□□□ 1.85
GPM6B-204ENST00000398361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.58■■□□□ 1.85
GPM6B-204ENST00000398361 USP35Q9P2H5 1018 aa26.58■■□□□ 1.85
GPM6B-204ENST00000398361 LARP1Q6PKG0 1096 aaKnown RBP26.57■■□□□ 1.84
GPM6B-204ENST00000398361 ZBTB7CA1YPR0 619 aa26.56■■□□□ 1.84
GPM6B-204ENST00000398361 FAM182BQ5T319 152 aa26.56■■□□□ 1.84
GPM6B-204ENST00000398361 TNS1Q9HBL0 1735 aaKnown RBP26.56■■□□□ 1.84
GPM6B-204ENST00000398361 COL5A2P05997 1499 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms