RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
PFKL-202ENST00000397961 C22orf23Q9BZE7 217 aa18.67■□□□□ 0.58
PFKL-202ENST00000397961 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
PFKL-202ENST00000397961 TBC1D2Q9BYX2 928 aa18.67■□□□□ 0.58
PFKL-202ENST00000397961 SLC52A1Q9NWF4 448 aa18.67■□□□□ 0.58
PFKL-202ENST00000397961 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
PFKL-202ENST00000397961 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
PFKL-202ENST00000397961 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
PFKL-202ENST00000397961 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
PFKL-202ENST00000397961 CEP152O94986 1710 aa18.64■□□□□ 0.58
PFKL-202ENST00000397961 C8orf58Q8NAV2 365 aa18.64■□□□□ 0.58
PFKL-202ENST00000397961 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
PFKL-202ENST00000397961 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
PFKL-202ENST00000397961 SMARCA5O60264 1052 aaPredicted RBP18.64■□□□□ 0.57
PFKL-202ENST00000397961 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
PFKL-202ENST00000397961 FOXO3O43524 673 aa18.63■□□□□ 0.57
PFKL-202ENST00000397961 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
PFKL-202ENST00000397961 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
PFKL-202ENST00000397961 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
PFKL-202ENST00000397961 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
PFKL-202ENST00000397961 SYNMO15061 1565 aa18.63■□□□□ 0.57
PFKL-202ENST00000397961 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
PFKL-202ENST00000397961 C16orf71Q8IYS4 520 aaPredicted RBP18.62■□□□□ 0.57
PFKL-202ENST00000397961 USP19O94966 1318 aa18.62■□□□□ 0.57
PFKL-202ENST00000397961 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
PFKL-202ENST00000397961 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
PFKL-202ENST00000397961 F6X3S4 739 aa18.61■□□□□ 0.57
PFKL-202ENST00000397961 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
PFKL-202ENST00000397961 RPGRIP1LQ68CZ1 1315 aa18.61■□□□□ 0.57
PFKL-202ENST00000397961 MAP3K4Q9Y6R4 1608 aa18.61■□□□□ 0.57
PFKL-202ENST00000397961 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
PFKL-202ENST00000397961 PPRC1Q5VV67 1664 aaKnown RBP18.61■□□□□ 0.57
PFKL-202ENST00000397961 POGZQ7Z3K3 1410 aa18.6■□□□□ 0.57
PFKL-202ENST00000397961 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
PFKL-202ENST00000397961 HSCBQ8IWL3 235 aa18.6■□□□□ 0.57
PFKL-202ENST00000397961 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
PFKL-202ENST00000397961 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
PFKL-202ENST00000397961 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
PFKL-202ENST00000397961 TET3O43151 1660 aa18.58■□□□□ 0.57
PFKL-202ENST00000397961 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.57
PFKL-202ENST00000397961 MROH2AA6NES4 1674 aa18.58■□□□□ 0.56
PFKL-202ENST00000397961 DTNBO60941 627 aa18.58■□□□□ 0.56
PFKL-202ENST00000397961 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
PFKL-202ENST00000397961 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.56
PFKL-202ENST00000397961 EFCAB6Q5THR3 1501 aa18.57■□□□□ 0.56
PFKL-202ENST00000397961 KIF1BO60333 1816 aa18.57■□□□□ 0.56
PFKL-202ENST00000397961 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
PFKL-202ENST00000397961 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
PFKL-202ENST00000397961 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
PFKL-202ENST00000397961 OTUD7AQ8TE49 926 aaPredicted RBP18.56■□□□□ 0.56
PFKL-202ENST00000397961 AMPHP49418 695 aa18.55■□□□□ 0.56
PFKL-202ENST00000397961 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
PFKL-202ENST00000397961 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
PFKL-202ENST00000397961 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
PFKL-202ENST00000397961 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
PFKL-202ENST00000397961 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
PFKL-202ENST00000397961 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
PFKL-202ENST00000397961 FCHSD2O94868 740 aa18.53■□□□□ 0.56
PFKL-202ENST00000397961 TBC1D32Q96NH3 1257 aa18.53■□□□□ 0.56
PFKL-202ENST00000397961 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
PFKL-202ENST00000397961 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
PFKL-202ENST00000397961 CCDC61Q9Y6R9 512 aa18.52■□□□□ 0.56
PFKL-202ENST00000397961 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
PFKL-202ENST00000397961 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
PFKL-202ENST00000397961 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
PFKL-202ENST00000397961 VAMP4O75379 141 aa18.51■□□□□ 0.55
PFKL-202ENST00000397961 RTF1Q92541 710 aaKnown RBP18.51■□□□□ 0.55
PFKL-202ENST00000397961 ZBTB40Q9NUA8 1239 aa18.51■□□□□ 0.55
PFKL-202ENST00000397961 MYOM1P52179 1685 aa18.51■□□□□ 0.55
PFKL-202ENST00000397961 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
PFKL-202ENST00000397961 MYOM2P54296 1465 aa18.5■□□□□ 0.55
PFKL-202ENST00000397961 GNAI1P63096 354 aa18.5■□□□□ 0.55
PFKL-202ENST00000397961 METP08581 1390 aa18.49■□□□□ 0.55
PFKL-202ENST00000397961 PANK2Q9BZ23 570 aa18.49■□□□□ 0.55
PFKL-202ENST00000397961 NLRP6P59044 892 aa18.49■□□□□ 0.55
PFKL-202ENST00000397961 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
PFKL-202ENST00000397961 INO80Q9ULG1 1556 aaPredicted RBP18.48■□□□□ 0.55
PFKL-202ENST00000397961 CHAMP1Q96JM3 812 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 ABCC3O15438 1527 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
PFKL-202ENST00000397961 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
PFKL-202ENST00000397961 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
PFKL-202ENST00000397961 ANXA1P04083 346 aa18.47■□□□□ 0.55
PFKL-202ENST00000397961 PPIP5K1Q6PFW1 1433 aa18.47■□□□□ 0.55
PFKL-202ENST00000397961 ACEP12821 1306 aa18.47■□□□□ 0.55
PFKL-202ENST00000397961 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
PFKL-202ENST00000397961 MEIS3Q99687 375 aa18.47■□□□□ 0.55
PFKL-202ENST00000397961 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
PFKL-202ENST00000397961 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
PFKL-202ENST00000397961 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
PFKL-202ENST00000397961 G2E3Q7L622 706 aa18.45■□□□□ 0.54
PFKL-202ENST00000397961 RILPL2Q969X0 211 aa18.45■□□□□ 0.54
PFKL-202ENST00000397961 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
PFKL-202ENST00000397961 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
PFKL-202ENST00000397961 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
PFKL-202ENST00000397961 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
PFKL-202ENST00000397961 IL13P35225 146 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms