RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 NGLY1Q96IV0 654 aa35.46■■■■□ 3.27
TSPAN4-207ENST00000397411 CDCA8Q53HL2 280 aa35.45■■■■□ 3.27
TSPAN4-207ENST00000397411 ABTB2Q8N961 1025 aa35.43■■■■□ 3.26
TSPAN4-207ENST00000397411 HSPA5P11021 654 aaKnown RBP35.42■■■■□ 3.26
TSPAN4-207ENST00000397411 NUTM2GQ5VZR2 741 aa35.41■■■■□ 3.26
TSPAN4-207ENST00000397411 HDGFL2Q7Z4V5 671 aaPredicted RBP35.41■■■■□ 3.26
TSPAN4-207ENST00000397411 SLC12A5Q9H2X9 1139 aa35.41■■■■□ 3.26
TSPAN4-207ENST00000397411 BRD4O60885 1362 aaPredicted RBP35.4■■■■□ 3.26
TSPAN4-207ENST00000397411 ZNF772Q68DY9 489 aaPredicted RBP35.39■■■■□ 3.26
TSPAN4-207ENST00000397411 TERF2IPQ9NYB0 399 aa35.39■■■■□ 3.26
TSPAN4-207ENST00000397411 RGS17Q9UGC6 210 aaPredicted RBP35.39■■■■□ 3.26
TSPAN4-207ENST00000397411 ALS2Q96Q42 1657 aa35.39■■■■□ 3.26
TSPAN4-207ENST00000397411 USP6P35125 1406 aa35.38■■■■□ 3.25
TSPAN4-207ENST00000397411 KTN1Q86UP2 1357 aaKnown RBP35.38■■■■□ 3.25
TSPAN4-207ENST00000397411 AFF2P51816 1311 aa35.37■■■■□ 3.25
TSPAN4-207ENST00000397411 POLR3GLQ9BT43 218 aa35.34■■■■□ 3.25
TSPAN4-207ENST00000397411 NLRP13Q86W25 1043 aa35.33■■■■□ 3.25
TSPAN4-207ENST00000397411 AKAP12Q02952 1782 aa35.33■■■■□ 3.25
TSPAN4-207ENST00000397411 NINLQ9Y2I6 1382 aa35.31■■■■□ 3.24
TSPAN4-207ENST00000397411 CPSF1Q10570 1443 aaKnown RBP35.31■■■■□ 3.24
TSPAN4-207ENST00000397411 TTC21BQ7Z4L5 1316 aa35.31■■■■□ 3.24
TSPAN4-207ENST00000397411 MARF1Q9Y4F3 1742 aaKnown RBP35.3■■■■□ 3.24
TSPAN4-207ENST00000397411 NLRP6P59044 892 aa35.3■■■■□ 3.24
TSPAN4-207ENST00000397411 POTEAQ6S8J7 498 aa35.29■■■■□ 3.24
TSPAN4-207ENST00000397411 USP21Q9UK80 565 aa35.28■■■■□ 3.24
TSPAN4-207ENST00000397411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.27■■■■□ 3.24
TSPAN4-207ENST00000397411 TTC21AQ8NDW8 1320 aa35.27■■■■□ 3.24
TSPAN4-207ENST00000397411 ILDR2Q71H61 639 aa35.26■■■■□ 3.24
TSPAN4-207ENST00000397411 ABCA3Q99758 1704 aa35.24■■■■□ 3.23
TSPAN4-207ENST00000397411 FNBP4Q8N3X1 1017 aaPredicted RBP35.24■■■■□ 3.23
TSPAN4-207ENST00000397411 SSH2Q76I76 1423 aa35.23■■■■□ 3.23
TSPAN4-207ENST00000397411 QTRT2Q9H974 415 aaKnown RBP35.23■■■■□ 3.23
TSPAN4-207ENST00000397411 CD163L1Q9NR16 1453 aa35.22■■■■□ 3.23
TSPAN4-207ENST00000397411 MON2Q7Z3U7 1717 aa35.21■■■■□ 3.23
TSPAN4-207ENST00000397411 A0A1W2PP64 1363 aa35.21■■■■□ 3.23
TSPAN4-207ENST00000397411 FAM83GA6ND36 823 aa35.2■■■■□ 3.23
TSPAN4-207ENST00000397411 ZC3H6P61129 1189 aaKnown RBP35.2■■■■□ 3.23
TSPAN4-207ENST00000397411 PRDM11Q9NQV5 511 aa35.19■■■■□ 3.22
TSPAN4-207ENST00000397411 GCP02774 474 aa35.17■■■■□ 3.22
TSPAN4-207ENST00000397411 RXRBP28702 533 aa35.17■■■■□ 3.22
TSPAN4-207ENST00000397411 TRPC5Q9UL62 973 aaPredicted RBP35.17■■■■□ 3.22
TSPAN4-207ENST00000397411 EDC4Q6P2E9 1401 aaKnown RBP35.16■■■■□ 3.22
TSPAN4-207ENST00000397411 ANKRD36BQ8N2N9 1353 aa35.16■■■■□ 3.22
TSPAN4-207ENST00000397411 USP19O94966 1318 aa35.15■■■■□ 3.22
TSPAN4-207ENST00000397411 CRYBG1Q9Y4K1 1723 aa35.15■■■■□ 3.22
TSPAN4-207ENST00000397411 PHRF1Q9P1Y6 1649 aaKnown RBP35.14■■■■□ 3.22
TSPAN4-207ENST00000397411 ZBTB7CA1YPR0 619 aa35.14■■■■□ 3.22
TSPAN4-207ENST00000397411 NME9Q86XW9 330 aa35.14■■■■□ 3.22
TSPAN4-207ENST00000397411 UNC5CLQ8IV45 518 aa35.14■■■■□ 3.22
TSPAN4-207ENST00000397411 PIK3C2AO00443 1686 aa35.13■■■■□ 3.21
TSPAN4-207ENST00000397411 NRKQ7Z2Y5 1582 aa35.13■■■■□ 3.21
TSPAN4-207ENST00000397411 KIAA0232Q92628 1395 aa35.13■■■■□ 3.21
TSPAN4-207ENST00000397411 SOX12O15370 315 aa35.11■■■■□ 3.21
TSPAN4-207ENST00000397411 CHRNA2Q15822 529 aa35.11■■■■□ 3.21
TSPAN4-207ENST00000397411 KCNH5Q8NCM2 988 aa35.11■■■■□ 3.21
TSPAN4-207ENST00000397411 BTG4Q9NY30 223 aa35.11■■■■□ 3.21
TSPAN4-207ENST00000397411 ZRANB1Q9UGI0 708 aa35.1■■■■□ 3.21
TSPAN4-207ENST00000397411 RBM6P78332 1123 aaKnown RBP35.09■■■■□ 3.21
TSPAN4-207ENST00000397411 CCDC9Q9Y3X0 531 aaKnown RBP35.09■■■■□ 3.21
TSPAN4-207ENST00000397411 SLIT2O94813 1529 aa35.09■■■■□ 3.21
TSPAN4-207ENST00000397411 BCL9LQ86UU0 1499 aa35.09■■■■□ 3.21
TSPAN4-207ENST00000397411 COL14A1Q05707 1796 aaKnown RBP35.08■■■■□ 3.21
TSPAN4-207ENST00000397411 PLCH1Q4KWH8 1693 aa35.06■■■■□ 3.2
TSPAN4-207ENST00000397411 C11orf95C9JLR9 678 aaPredicted RBP35.06■■■■□ 3.2
TSPAN4-207ENST00000397411 NWD2Q9ULI1 1742 aa35.04■■■■□ 3.2
TSPAN4-207ENST00000397411 USP31Q70CQ4 1352 aa35.04■■■■□ 3.2
TSPAN4-207ENST00000397411 EVA1CP58658 441 aa35.03■■■■□ 3.2
TSPAN4-207ENST00000397411 MYOM1P52179 1685 aa35.02■■■■□ 3.2
TSPAN4-207ENST00000397411 ATRNO75882 1429 aa35.02■■■■□ 3.2
TSPAN4-207ENST00000397411 COG3Q96JB2 828 aa35.02■■■■□ 3.2
TSPAN4-207ENST00000397411 SLIT3O75094 1523 aa35.01■■■■□ 3.2
TSPAN4-207ENST00000397411 CPDO75976 1380 aa35.01■■■■□ 3.2
TSPAN4-207ENST00000397411 GJD4Q96KN9 370 aaPredicted RBP35■■■■□ 3.19
TSPAN4-207ENST00000397411 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.99■■■■□ 3.19
TSPAN4-207ENST00000397411 VPS72Q15906 364 aa34.99■■■■□ 3.19
TSPAN4-207ENST00000397411 STRN4Q9NRL3 753 aa34.99■■■■□ 3.19
TSPAN4-207ENST00000397411 CARD14Q9BXL6 1004 aa34.98■■■■□ 3.19
TSPAN4-207ENST00000397411 PANK3Q9H999 370 aa34.96■■■■□ 3.19
TSPAN4-207ENST00000397411 KIF7Q2M1P5 1343 aa34.96■■■■□ 3.19
TSPAN4-207ENST00000397411 FYB1O15117 783 aa34.95■■■■□ 3.19
TSPAN4-207ENST00000397411 ZEB1P37275 1124 aaPredicted RBP34.95■■■■□ 3.19
TSPAN4-207ENST00000397411 GGNBP2Q9H3C7 697 aa34.95■■■■□ 3.19
TSPAN4-207ENST00000397411 NSD3Q9BZ95 1437 aa34.95■■■■□ 3.19
TSPAN4-207ENST00000397411 ARHGEF25Q86VW2 580 aa34.93■■■■□ 3.18
TSPAN4-207ENST00000397411 AATKQ6ZMQ8 1374 aa34.9■■■■□ 3.18
TSPAN4-207ENST00000397411 USP54Q70EL1 1684 aa34.9■■■■□ 3.18
TSPAN4-207ENST00000397411 CGNL1Q0VF96 1302 aa34.89■■■■□ 3.18
TSPAN4-207ENST00000397411 NRAPQ86VF7 1730 aa34.89■■■■□ 3.18
TSPAN4-207ENST00000397411 OVOS2A0A0J9YW53 1432 aa34.89■■■■□ 3.18
TSPAN4-207ENST00000397411 OVOS2Q6IE36 1432 aa34.89■■■■□ 3.18
TSPAN4-207ENST00000397411 CDK12Q9NYV4 1490 aaPredicted RBP34.88■■■■□ 3.17
TSPAN4-207ENST00000397411 CAMTA1Q9Y6Y1 1673 aa34.87■■■■□ 3.17
TSPAN4-207ENST00000397411 SOCS7O14512 581 aa34.87■■■■□ 3.17
TSPAN4-207ENST00000397411 KIF20BQ96Q89 1820 aa34.87■■■■□ 3.17
TSPAN4-207ENST00000397411 NFAT5O94916 1531 aa34.86■■■■□ 3.17
TSPAN4-207ENST00000397411 A0A0G2JS52 829 aa34.85■■■■□ 3.17
TSPAN4-207ENST00000397411 MYT1Q01538 1121 aa34.85■■■■□ 3.17
TSPAN4-207ENST00000397411 CCDC7Q96M83 1385 aa34.84■■■■□ 3.17
TSPAN4-207ENST00000397411 SPATA31A5Q5VU36 1347 aa34.83■■■■□ 3.17
TSPAN4-207ENST00000397411 SPATA31A7Q8IWB4 1347 aa34.83■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms