RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
SEC13-206ENST00000397102 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
SEC13-206ENST00000397102 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
SEC13-206ENST00000397102 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
SEC13-206ENST00000397102 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
SEC13-206ENST00000397102 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
SEC13-206ENST00000397102 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
SEC13-206ENST00000397102 R3HDM1Q15032 1099 aaKnown RBP22.24■■□□□ 1.15
SEC13-206ENST00000397102 PRR36Q9H6K5 1346 aa22.22■■□□□ 1.15
SEC13-206ENST00000397102 HIRIP3Q9BW71 556 aaPredicted RBP22.21■■□□□ 1.15
SEC13-206ENST00000397102 PRDM11Q9NQV5 511 aa22.2■■□□□ 1.14
SEC13-206ENST00000397102 EZH2Q15910 746 aaKnown RBP22.19■■□□□ 1.14
SEC13-206ENST00000397102 ITSN1Q15811 1721 aa22.19■■□□□ 1.14
SEC13-206ENST00000397102 PHRF1Q9P1Y6 1649 aaKnown RBP22.18■■□□□ 1.14
SEC13-206ENST00000397102 MINK1Q8N4C8 1332 aaPredicted RBP22.18■■□□□ 1.14
SEC13-206ENST00000397102 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
SEC13-206ENST00000397102 SPATA31A1Q5TZJ5 1347 aa22.17■■□□□ 1.14
SEC13-206ENST00000397102 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
SEC13-206ENST00000397102 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
SEC13-206ENST00000397102 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
SEC13-206ENST00000397102 PARD3Q8TEW0 1356 aa22.16■■□□□ 1.14
SEC13-206ENST00000397102 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
SEC13-206ENST00000397102 FAM196AQ6ZSG2 479 aa22.16■■□□□ 1.14
SEC13-206ENST00000397102 RREB1Q92766 1687 aa22.16■■□□□ 1.14
SEC13-206ENST00000397102 KIAA0232Q92628 1395 aa22.14■■□□□ 1.14
SEC13-206ENST00000397102 TRIM37O94972 964 aa22.14■■□□□ 1.13
SEC13-206ENST00000397102 ATP7BP35670 1465 aa22.13■■□□□ 1.13
SEC13-206ENST00000397102 NUP188Q5SRE5 1749 aa22.12■■□□□ 1.13
SEC13-206ENST00000397102 ARHGEF28Q8N1W1 1705 aaKnown RBP22.11■■□□□ 1.13
SEC13-206ENST00000397102 APBA3O96018 575 aa22.1■■□□□ 1.13
SEC13-206ENST00000397102 CHRNA2Q15822 529 aa22.1■■□□□ 1.13
SEC13-206ENST00000397102 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
SEC13-206ENST00000397102 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
SEC13-206ENST00000397102 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
SEC13-206ENST00000397102 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
SEC13-206ENST00000397102 NUDT16Q96DE0 195 aaKnown RBP22.06■■□□□ 1.12
SEC13-206ENST00000397102 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
SEC13-206ENST00000397102 NRKQ7Z2Y5 1582 aa22.05■■□□□ 1.12
SEC13-206ENST00000397102 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
SEC13-206ENST00000397102 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
SEC13-206ENST00000397102 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
SEC13-206ENST00000397102 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
SEC13-206ENST00000397102 NBPF14Q5TI25 921 aa22.04■■□□□ 1.12
SEC13-206ENST00000397102 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
SEC13-206ENST00000397102 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
SEC13-206ENST00000397102 POLR3AO14802 1390 aaPredicted RBP22.03■■□□□ 1.12
SEC13-206ENST00000397102 EVA1CP58658 441 aa22.03■■□□□ 1.12
SEC13-206ENST00000397102 DCAF11Q8TEB1 546 aa22.03■■□□□ 1.12
SEC13-206ENST00000397102 CAMTA1Q9Y6Y1 1673 aa22.03■■□□□ 1.12
SEC13-206ENST00000397102 YY1P25490 414 aa22.02■■□□□ 1.12
SEC13-206ENST00000397102 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
SEC13-206ENST00000397102 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
SEC13-206ENST00000397102 CPDO75976 1380 aa22■■□□□ 1.11
SEC13-206ENST00000397102 TCP11L2Q8N4U5 519 aa22■■□□□ 1.11
SEC13-206ENST00000397102 LARP1Q6PKG0 1096 aaKnown RBP21.99■■□□□ 1.11
SEC13-206ENST00000397102 ACEP12821 1306 aa21.99■■□□□ 1.11
SEC13-206ENST00000397102 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
SEC13-206ENST00000397102 CDK19Q9BWU1 502 aa21.98■■□□□ 1.11
SEC13-206ENST00000397102 THRAP3Q9Y2W1 955 aaKnown RBP21.98■■□□□ 1.11
SEC13-206ENST00000397102 RGPD3A6NKT7 1758 aaPredicted RBP21.97■■□□□ 1.11
SEC13-206ENST00000397102 RGPD4Q7Z3J3 1758 aa21.97■■□□□ 1.11
SEC13-206ENST00000397102 SPON1Q9HCB6 807 aa21.97■■□□□ 1.11
SEC13-206ENST00000397102 USP19O94966 1318 aa21.97■■□□□ 1.11
SEC13-206ENST00000397102 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
SEC13-206ENST00000397102 PLEKHG3A1L390 1219 aa21.95■■□□□ 1.1
SEC13-206ENST00000397102 C11orf95C9JLR9 678 aaPredicted RBP21.95■■□□□ 1.1
SEC13-206ENST00000397102 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
SEC13-206ENST00000397102 PPP1R1BQ9UD71 204 aaPredicted RBP21.95■■□□□ 1.1
SEC13-206ENST00000397102 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
SEC13-206ENST00000397102 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
SEC13-206ENST00000397102 KCNQ2O43526 872 aa21.94■■□□□ 1.1
SEC13-206ENST00000397102 COL5A2P05997 1499 aaPredicted RBP21.94■■□□□ 1.1
SEC13-206ENST00000397102 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
SEC13-206ENST00000397102 OVOS2A0A0G2JMS6 1433 aa21.92■■□□□ 1.1
SEC13-206ENST00000397102 OVOS2A0A0J9YW53 1432 aa21.92■■□□□ 1.1
SEC13-206ENST00000397102 OVOS2Q6IE36 1432 aa21.92■■□□□ 1.1
SEC13-206ENST00000397102 DCAF8L1A6NGE4 600 aa21.92■■□□□ 1.1
SEC13-206ENST00000397102 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
SEC13-206ENST00000397102 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
SEC13-206ENST00000397102 CRB1P82279 1406 aa21.9■■□□□ 1.1
SEC13-206ENST00000397102 GCP02774 474 aa21.9■■□□□ 1.1
SEC13-206ENST00000397102 LRRC37A3O60309 1634 aa21.9■■□□□ 1.1
SEC13-206ENST00000397102 CASZ1Q86V15 1759 aa21.89■■□□□ 1.09
SEC13-206ENST00000397102 PLSCR1O15162 318 aa21.87■■□□□ 1.09
SEC13-206ENST00000397102 WNK3Q9BYP7 1800 aa21.87■■□□□ 1.09
SEC13-206ENST00000397102 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
SEC13-206ENST00000397102 PPIP5K1Q6PFW1 1433 aa21.86■■□□□ 1.09
SEC13-206ENST00000397102 SLIT3O75094 1523 aa21.84■■□□□ 1.09
SEC13-206ENST00000397102 DDB1Q16531 1140 aa21.83■■□□□ 1.09
SEC13-206ENST00000397102 AATKQ6ZMQ8 1374 aa21.83■■□□□ 1.08
SEC13-206ENST00000397102 AKAP12Q02952 1782 aa21.82■■□□□ 1.08
SEC13-206ENST00000397102 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
SEC13-206ENST00000397102 COL18A1P39060 1754 aa21.82■■□□□ 1.08
SEC13-206ENST00000397102 SRPK2P78362 688 aaKnown RBP21.81■■□□□ 1.08
SEC13-206ENST00000397102 BCL11BQ9C0K0 894 aaPredicted RBP21.81■■□□□ 1.08
SEC13-206ENST00000397102 BCL9O00512 1426 aa21.8■■□□□ 1.08
SEC13-206ENST00000397102 USP6P35125 1406 aa21.8■■□□□ 1.08
SEC13-206ENST00000397102 MYOM1P52179 1685 aa21.79■■□□□ 1.08
SEC13-206ENST00000397102 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
SEC13-206ENST00000397102 TOM1L2Q6ZVM7 507 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms