RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 BRWD3Q6RI45 1802 aa25.64■■□□□ 1.7
EXOSC3-202ENST00000396521 SPATA31A5Q5VU36 1347 aa25.63■■□□□ 1.69
EXOSC3-202ENST00000396521 SPATA31A7Q8IWB4 1347 aa25.63■■□□□ 1.69
EXOSC3-202ENST00000396521 ABCA3Q99758 1704 aa25.63■■□□□ 1.69
EXOSC3-202ENST00000396521 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
EXOSC3-202ENST00000396521 PRDM11Q9NQV5 511 aa25.62■■□□□ 1.69
EXOSC3-202ENST00000396521 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
EXOSC3-202ENST00000396521 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
EXOSC3-202ENST00000396521 NUDT16Q96DE0 195 aaKnown RBP25.58■■□□□ 1.69
EXOSC3-202ENST00000396521 ALS2Q96Q42 1657 aa25.58■■□□□ 1.68
EXOSC3-202ENST00000396521 NRAPQ86VF7 1730 aa25.55■■□□□ 1.68
EXOSC3-202ENST00000396521 FAM196AQ6ZSG2 479 aa25.53■■□□□ 1.68
EXOSC3-202ENST00000396521 CCDC61Q9Y6R9 512 aa25.53■■□□□ 1.68
EXOSC3-202ENST00000396521 DISP2A7MBM2 1401 aa25.53■■□□□ 1.68
EXOSC3-202ENST00000396521 ATP7BP35670 1465 aa25.53■■□□□ 1.68
EXOSC3-202ENST00000396521 SPATA31A1Q5TZJ5 1347 aa25.52■■□□□ 1.68
EXOSC3-202ENST00000396521 EN1Q05925 392 aaPredicted RBP25.51■■□□□ 1.67
EXOSC3-202ENST00000396521 CDK19Q9BWU1 502 aa25.51■■□□□ 1.67
EXOSC3-202ENST00000396521 KIAA0232Q92628 1395 aa25.51■■□□□ 1.67
EXOSC3-202ENST00000396521 LRP5O75197 1615 aa25.51■■□□□ 1.67
EXOSC3-202ENST00000396521 POLR3AO14802 1390 aaPredicted RBP25.49■■□□□ 1.67
EXOSC3-202ENST00000396521 PLEKHG3A1L390 1219 aa25.49■■□□□ 1.67
EXOSC3-202ENST00000396521 PSDA5PKW4 1024 aaPredicted RBP25.48■■□□□ 1.67
EXOSC3-202ENST00000396521 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
EXOSC3-202ENST00000396521 BARGINQ6ZT62 677 aa25.47■■□□□ 1.67
EXOSC3-202ENST00000396521 PARD3Q8TEW0 1356 aa25.46■■□□□ 1.67
EXOSC3-202ENST00000396521 ACEP12821 1306 aa25.46■■□□□ 1.67
EXOSC3-202ENST00000396521 EVA1CP58658 441 aa25.46■■□□□ 1.67
EXOSC3-202ENST00000396521 ITSN1Q15811 1721 aa25.46■■□□□ 1.67
EXOSC3-202ENST00000396521 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.67
EXOSC3-202ENST00000396521 ZC3H6P61129 1189 aaKnown RBP25.45■■□□□ 1.66
EXOSC3-202ENST00000396521 CHRNA2Q15822 529 aa25.45■■□□□ 1.66
EXOSC3-202ENST00000396521 STRN4Q9NRL3 753 aa25.45■■□□□ 1.66
EXOSC3-202ENST00000396521 RGPD1P0DJD0 1748 aa25.44■■□□□ 1.66
EXOSC3-202ENST00000396521 C11orf95C9JLR9 678 aaPredicted RBP25.44■■□□□ 1.66
EXOSC3-202ENST00000396521 FAM182BQ5T319 152 aa25.44■■□□□ 1.66
EXOSC3-202ENST00000396521 PDE3BQ13370 1112 aa25.43■■□□□ 1.66
EXOSC3-202ENST00000396521 ABTB2Q8N961 1025 aa25.43■■□□□ 1.66
EXOSC3-202ENST00000396521 CRYBG1Q9Y4K1 1723 aa25.43■■□□□ 1.66
EXOSC3-202ENST00000396521 BRD4O60885 1362 aaPredicted RBP25.43■■□□□ 1.66
EXOSC3-202ENST00000396521 CPDO75976 1380 aa25.42■■□□□ 1.66
EXOSC3-202ENST00000396521 R3HDM1Q15032 1099 aaKnown RBP25.41■■□□□ 1.66
EXOSC3-202ENST00000396521 NLRP13Q86W25 1043 aa25.41■■□□□ 1.66
EXOSC3-202ENST00000396521 CAMKK2Q96RR4 588 aa25.41■■□□□ 1.66
EXOSC3-202ENST00000396521 THRAP3Q9Y2W1 955 aaKnown RBP25.41■■□□□ 1.66
EXOSC3-202ENST00000396521 TRIM37O94972 964 aa25.4■■□□□ 1.66
EXOSC3-202ENST00000396521 ARHGEF28Q8N1W1 1705 aaKnown RBP25.4■■□□□ 1.66
EXOSC3-202ENST00000396521 EZH2Q15910 746 aaKnown RBP25.39■■□□□ 1.66
EXOSC3-202ENST00000396521 NUTM2GQ5VZR2 741 aa25.39■■□□□ 1.66
EXOSC3-202ENST00000396521 TCP11L2Q8N4U5 519 aa25.39■■□□□ 1.66
EXOSC3-202ENST00000396521 SSH2Q76I76 1423 aa25.38■■□□□ 1.65
EXOSC3-202ENST00000396521 APBA3O96018 575 aa25.38■■□□□ 1.65
EXOSC3-202ENST00000396521 USP19O94966 1318 aa25.37■■□□□ 1.65
EXOSC3-202ENST00000396521 USP35Q9P2H5 1018 aa25.37■■□□□ 1.65
EXOSC3-202ENST00000396521 GCP02774 474 aa25.35■■□□□ 1.65
EXOSC3-202ENST00000396521 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
EXOSC3-202ENST00000396521 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
EXOSC3-202ENST00000396521 NBPF14Q5TI25 921 aa25.33■■□□□ 1.65
EXOSC3-202ENST00000396521 LARP1Q6PKG0 1096 aaKnown RBP25.33■■□□□ 1.65
EXOSC3-202ENST00000396521 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
EXOSC3-202ENST00000396521 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.64
EXOSC3-202ENST00000396521 CAMTA1Q9Y6Y1 1673 aa25.3■■□□□ 1.64
EXOSC3-202ENST00000396521 TNS1Q9HBL0 1735 aaKnown RBP25.3■■□□□ 1.64
EXOSC3-202ENST00000396521 NBPF1Q3BBV0 1214 aa25.3■■□□□ 1.64
EXOSC3-202ENST00000396521 TOPAZ1Q8N9V7 1692 aa25.29■■□□□ 1.64
EXOSC3-202ENST00000396521 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
EXOSC3-202ENST00000396521 NRKQ7Z2Y5 1582 aa25.27■■□□□ 1.64
EXOSC3-202ENST00000396521 CABP2Q9NPB3 220 aa25.25■■□□□ 1.63
EXOSC3-202ENST00000396521 AATKQ6ZMQ8 1374 aa25.25■■□□□ 1.63
EXOSC3-202ENST00000396521 CRB1P82279 1406 aa25.24■■□□□ 1.63
EXOSC3-202ENST00000396521 NLRP6P59044 892 aa25.24■■□□□ 1.63
EXOSC3-202ENST00000396521 LMO7Q8WWI1 1683 aa25.23■■□□□ 1.63
EXOSC3-202ENST00000396521 COL5A2P05997 1499 aaPredicted RBP25.23■■□□□ 1.63
EXOSC3-202ENST00000396521 CABP1Q9NZU7 370 aa25.23■■□□□ 1.63
EXOSC3-202ENST00000396521 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
EXOSC3-202ENST00000396521 USP6P35125 1406 aa25.21■■□□□ 1.63
EXOSC3-202ENST00000396521 ZNF692Q9BU19 519 aaPredicted RBP25.21■■□□□ 1.63
EXOSC3-202ENST00000396521 EVC2Q86UK5 1308 aa25.2■■□□□ 1.62
EXOSC3-202ENST00000396521 OVOS2A0A0G2JMS6 1433 aa25.2■■□□□ 1.62
EXOSC3-202ENST00000396521 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.62
EXOSC3-202ENST00000396521 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.62
EXOSC3-202ENST00000396521 PLSCR1O15162 318 aa25.19■■□□□ 1.62
EXOSC3-202ENST00000396521 DDB1Q16531 1140 aa25.19■■□□□ 1.62
EXOSC3-202ENST00000396521 SPON1Q9HCB6 807 aa25.18■■□□□ 1.62
EXOSC3-202ENST00000396521 TOM1L2Q6ZVM7 507 aa25.17■■□□□ 1.62
EXOSC3-202ENST00000396521 KCNH5Q8NCM2 988 aa25.17■■□□□ 1.62
EXOSC3-202ENST00000396521 BCL11BQ9C0K0 894 aaPredicted RBP25.15■■□□□ 1.62
EXOSC3-202ENST00000396521 PARP4Q9UKK3 1724 aaKnown RBP25.15■■□□□ 1.62
EXOSC3-202ENST00000396521 ZBTB7CA1YPR0 619 aa25.14■■□□□ 1.62
EXOSC3-202ENST00000396521 DCAF8L1A6NGE4 600 aa25.14■■□□□ 1.62
EXOSC3-202ENST00000396521 KCNQ2O43526 872 aa25.14■■□□□ 1.62
EXOSC3-202ENST00000396521 RREB1Q92766 1687 aa25.13■■□□□ 1.61
EXOSC3-202ENST00000396521 WDR17Q8IZU2 1322 aa25.13■■□□□ 1.61
EXOSC3-202ENST00000396521 SLIT3O75094 1523 aa25.13■■□□□ 1.61
EXOSC3-202ENST00000396521 PPP1R1BQ9UD71 204 aaPredicted RBP25.13■■□□□ 1.61
EXOSC3-202ENST00000396521 BCL9O00512 1426 aa25.12■■□□□ 1.61
EXOSC3-202ENST00000396521 L3MBTL2Q969R5 705 aa25.12■■□□□ 1.61
EXOSC3-202ENST00000396521 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
EXOSC3-202ENST00000396521 ARHGEF25Q86VW2 580 aa25.11■■□□□ 1.61
EXOSC3-202ENST00000396521 CARD10Q9BWT7 1032 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms