RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 C22orf23Q9BZE7 217 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 ANKRD30AQ9BXX3 1397 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
CHD2-201ENST00000394196 CPLX1O14810 134 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 HDAC1Q13547 482 aaPredicted RBP10.7□□□□□ -0.7
CHD2-201ENST00000394196 JAKMIP3Q5VZ66 844 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 DNAI2Q9GZS0 605 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 SCRIBQ14160 1630 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 CBFA2T2O43439 604 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 CEP104O60308 925 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 ANKRD18BA2A2Z9 1011 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 KIF5BP33176 963 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 FILIP1Q7Z7B0 1213 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 GCOM1H8Y6P7 765 aaPredicted RBP10.69□□□□□ -0.7
CHD2-201ENST00000394196 MYZAPP0CAP1 466 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 TRDNQ13061 729 aa10.69□□□□□ -0.7
CHD2-201ENST00000394196 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
CHD2-201ENST00000394196 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 GRPEL1Q9HAV7 217 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 ZHX1Q9UKY1 873 aaPredicted RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 SYCP1Q15431 976 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 NOL3O60936 208 aaKnown RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 XBP1P17861 261 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 FOXD4L5Q5VV16 416 aaPredicted RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 FOXD4L4Q8WXT5 416 aaPredicted RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 PSMA5P28066 241 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 CCDC65Q8IXS2 484 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 KRT222Q8N1A0 295 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
CHD2-201ENST00000394196 SRPK2P78362 688 aaKnown RBP10.68□□□□□ -0.7
CHD2-201ENST00000394196 TXLNAP40222 546 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 NOL8Q76FK4 1167 aaKnown RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 NAP1L3Q99457 506 aaPredicted RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 STMN1P16949 149 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 RMDN2Q96LZ7 410 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 PPP1R12BO60237 982 aaPredicted RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 TUBB4BP68371 445 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 CRACR2AQ9BSW2 395 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 SREK1Q8WXA9 508 aaKnown RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 SENP3-EIF4A1A0A087X0R7 540 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 POLE3Q9NRF9 147 aa10.67□□□□□ -0.7
CHD2-201ENST00000394196 LUC7L2Q9Y383 392 aaKnown RBP10.67□□□□□ -0.7
CHD2-201ENST00000394196 TACC1O75410 805 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 ZC4H2Q9NQZ6 224 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 SPATS2LQ9NUQ6 558 aaKnown RBP10.66□□□□□ -0.7
CHD2-201ENST00000394196 CHMP2AO43633 222 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 UBXN4Q92575 508 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 HSP90AB4PQ58FF6 505 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
CHD2-201ENST00000394196 RABGAP1Q9Y3P9 1069 aa10.66□□□□□ -0.7
CHD2-201ENST00000394196 WHAMMP3Q1A5X7 153 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 CCDC181Q5TID7 509 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 ZNF365Q70YC5 407 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 JMYQ8N9B5 988 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
CHD2-201ENST00000394196 TCEAL9Q9UHQ7 104 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 CCDC158Q5M9N0 1113 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 CNPY4Q8N129 248 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 PDILTQ8N807 584 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 SMC6Q96SB8 1091 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 BRPF3Q9ULD4 1205 aa10.65□□□□□ -0.7
CHD2-201ENST00000394196 ZNF396Q96N95 335 aaPredicted RBP10.65□□□□□ -0.71
CHD2-201ENST00000394196 CCDC94Q9BW85 323 aaPredicted RBP10.65□□□□□ -0.71
CHD2-201ENST00000394196 ERICH2A1L162 156 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 A6NNZ2 444 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 MAP2K1Q02750 393 aaPredicted RBP10.64□□□□□ -0.71
CHD2-201ENST00000394196 MAP2K2P36507 400 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 CEP120Q8N960 986 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 DDX12PQ92771 950 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 ERC2O15083 957 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
CHD2-201ENST00000394196 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
CHD2-201ENST00000394196 FMN1Q68DA7 1419 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 CCDC92Q53HC0 331 aaPredicted RBP10.64□□□□□ -0.71
CHD2-201ENST00000394196 VPS8Q8N3P4 1428 aa10.64□□□□□ -0.71
CHD2-201ENST00000394196 BLVRAP53004 296 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 IL27Q8NEV9 243 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
CHD2-201ENST00000394196 TAX1BP1Q86VP1 789 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 KIF18AQ8NI77 898 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 FAM114A2Q9NRY5 505 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
CHD2-201ENST00000394196 GMNNO75496 209 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms