RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 STK3Q13188 491 aa19.23■□□□□ 0.67
SHANK1-204ENST00000391814 ZRSR2Q15696 482 aaKnown RBP19.22■□□□□ 0.67
SHANK1-204ENST00000391814 C1orf141Q5JVX7 400 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 CALCOCO1Q9P1Z2 691 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 OFD1O75665 1012 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 MAGEC2Q9UBF1 373 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-204ENST00000391814 WIZO95785 1651 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 EVC2Q86UK5 1308 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 NEXNQ0ZGT2 675 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
SHANK1-204ENST00000391814 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
SHANK1-204ENST00000391814 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
SHANK1-204ENST00000391814 POLR3GO15318 223 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-204ENST00000391814 CCDC181Q5TID7 509 aa19.21■□□□□ 0.67
SHANK1-204ENST00000391814 ODF2Q5BJF6 829 aa19.21■□□□□ 0.67
SHANK1-204ENST00000391814 TMCO3Q6UWJ1 677 aa19.21■□□□□ 0.67
SHANK1-204ENST00000391814 GOLGA6L7A0A1B0GV03 622 aa19.21■□□□□ 0.67
SHANK1-204ENST00000391814 PPFIBP1Q86W92 1011 aa19.21■□□□□ 0.67
SHANK1-204ENST00000391814 HMOX1P09601 288 aa19.2■□□□□ 0.66
SHANK1-204ENST00000391814 RBM25P49756 843 aaKnown RBP19.2■□□□□ 0.66
SHANK1-204ENST00000391814 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
SHANK1-204ENST00000391814 ZFYVE27Q5T4F4 411 aa19.2■□□□□ 0.66
SHANK1-204ENST00000391814 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-204ENST00000391814 ENOX2Q16206 610 aaKnown RBP19.19■□□□□ 0.66
SHANK1-204ENST00000391814 RALYLQ86SE5 291 aaKnown RBP19.19■□□□□ 0.66
SHANK1-204ENST00000391814 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
SHANK1-204ENST00000391814 GNAI1P63096 354 aa19.19■□□□□ 0.66
SHANK1-204ENST00000391814 CTDP1Q9Y5B0 961 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-204ENST00000391814 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
SHANK1-204ENST00000391814 STK38Q15208 465 aa19.19■□□□□ 0.66
SHANK1-204ENST00000391814 FSD1Q9BTV5 496 aa19.19■□□□□ 0.66
SHANK1-204ENST00000391814 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 GTF2F1P35269 517 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHANK1-204ENST00000391814 CAMK4Q16566 473 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 HSP90AB4PQ58FF6 505 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 AMOTL1Q8IY63 956 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 WASHC4Q2M389 1173 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 GCC1Q96CN9 775 aa19.18■□□□□ 0.66
SHANK1-204ENST00000391814 ERLIN2O94905 339 aa19.17■□□□□ 0.66
SHANK1-204ENST00000391814 CBFA2T2O43439 604 aa19.17■□□□□ 0.66
SHANK1-204ENST00000391814 ZFP91Q96JP5 570 aaPredicted RBP19.17■□□□□ 0.66
SHANK1-204ENST00000391814 FILIP1Q7Z7B0 1213 aa19.17■□□□□ 0.66
SHANK1-204ENST00000391814 NOL10Q9BSC4 688 aaKnown RBP19.17■□□□□ 0.66
SHANK1-204ENST00000391814 NUP62CLQ9H1M0 184 aa19.17■□□□□ 0.66
SHANK1-204ENST00000391814 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SHANK1-204ENST00000391814 UBXN4Q92575 508 aa19.16■□□□□ 0.66
SHANK1-204ENST00000391814 DHX8Q14562 1220 aaKnown RBP19.16■□□□□ 0.66
SHANK1-204ENST00000391814 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
SHANK1-204ENST00000391814 TAX1BP1Q86VP1 789 aa19.16■□□□□ 0.66
SHANK1-204ENST00000391814 DYDC1Q8WWB3 177 aa19.16■□□□□ 0.66
SHANK1-204ENST00000391814 NACADO15069 1562 aa19.16■□□□□ 0.66
SHANK1-204ENST00000391814 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-204ENST00000391814 PDCP20941 246 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 ATP2B1P20020 1258 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 BBXQ8WY36 941 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-204ENST00000391814 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-204ENST00000391814 CASQ1P31415 396 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 TEFQ10587 303 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 IPO4Q8TEX9 1081 aaKnown RBP19.15■□□□□ 0.66
SHANK1-204ENST00000391814 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 ME1P48163 572 aa19.15■□□□□ 0.66
SHANK1-204ENST00000391814 PDE3AQ14432 1141 aa19.14■□□□□ 0.66
SHANK1-204ENST00000391814 PTPN14Q15678 1187 aa19.14■□□□□ 0.66
SHANK1-204ENST00000391814 MINK1Q8N4C8 1332 aaPredicted RBP19.14■□□□□ 0.66
SHANK1-204ENST00000391814 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.65
SHANK1-204ENST00000391814 SPATA32Q96LK8 384 aa19.14■□□□□ 0.65
SHANK1-204ENST00000391814 FYB1O15117 783 aa19.14■□□□□ 0.65
SHANK1-204ENST00000391814 KRT85P78386 507 aa19.14■□□□□ 0.65
SHANK1-204ENST00000391814 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
SHANK1-204ENST00000391814 ZNHIT6Q9NWK9 470 aaKnown RBP19.13■□□□□ 0.65
SHANK1-204ENST00000391814 NEFHP12036 1026 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 TNNT1P13805 278 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 STK11IPQ8N1F8 1099 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 DNAJC2Q99543 621 aaKnown RBP19.13■□□□□ 0.65
SHANK1-204ENST00000391814 TMX1Q9H3N1 280 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 INCENPQ9NQS7 918 aa19.13■□□□□ 0.65
SHANK1-204ENST00000391814 CHD1LQ86WJ1 897 aa19.12■□□□□ 0.65
SHANK1-204ENST00000391814 CYP46A1Q9Y6A2 500 aa19.12■□□□□ 0.65
SHANK1-204ENST00000391814 CCDC43Q96MW1 224 aaKnown RBP19.12■□□□□ 0.65
SHANK1-204ENST00000391814 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 ANKRD62A6NC57 917 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 MTMR7Q9Y216 660 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
SHANK1-204ENST00000391814 XBP1P17861 261 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 LARP1BQ659C4 914 aaKnown RBP19.11■□□□□ 0.65
SHANK1-204ENST00000391814 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
SHANK1-204ENST00000391814 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
SHANK1-204ENST00000391814 DYNC1I1O14576 645 aa19.1■□□□□ 0.65
SHANK1-204ENST00000391814 UPF3BQ9BZI7 483 aaKnown RBP19.1■□□□□ 0.65
SHANK1-204ENST00000391814 SEPT7Q16181 437 aaKnown RBP19.1■□□□□ 0.65
SHANK1-204ENST00000391814 IQCEQ6IPM2 695 aa19.1■□□□□ 0.65
SHANK1-204ENST00000391814 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
SHANK1-204ENST00000391814 GTF2A1P52655 376 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-204ENST00000391814 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
SHANK1-204ENST00000391814 MAP3K11Q16584 847 aa19.09■□□□□ 0.65
SHANK1-204ENST00000391814 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms