RNA–Protein interactions for RNA: ENST00000391249.2

U3.28-201, humanhuman

BASIC

Gene U3, Length 210 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.28-201ENST00000391249 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
U3.28-201ENST00000391249 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
U3.28-201ENST00000391249 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
U3.28-201ENST00000391249 SH3BP2P78314 561 aa9.21□□□□□ -0.94
U3.28-201ENST00000391249 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.94
U3.28-201ENST00000391249 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
U3.28-201ENST00000391249 J3QL48 77 aa9.2□□□□□ -0.94
U3.28-201ENST00000391249 SIAH2O43255 324 aa9.2□□□□□ -0.94
U3.28-201ENST00000391249 CLK2P49760 499 aaKnown RBP9.2□□□□□ -0.94
U3.28-201ENST00000391249 POTECB2RU33 542 aa9.19□□□□□ -0.94
U3.28-201ENST00000391249 F12P00748 615 aaPredicted RBP9.19□□□□□ -0.94
U3.28-201ENST00000391249 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
U3.28-201ENST00000391249 BAP1Q92560 729 aa9.19□□□□□ -0.94
U3.28-201ENST00000391249 FAM117AQ9C073 453 aa9.19□□□□□ -0.94
U3.28-201ENST00000391249 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
U3.28-201ENST00000391249 BICRAQ9NZM4 1560 aa9.19□□□□□ -0.94
U3.28-201ENST00000391249 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 PER1O15534 1290 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 RTL5Q5HYW3 569 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 NUTM2DQ5VT03 806 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
U3.28-201ENST00000391249 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
U3.28-201ENST00000391249 DACH1Q9UI36 760 aa9.17□□□□□ -0.94
U3.28-201ENST00000391249 TOP2AP11388 1531 aaKnown RBP9.16□□□□□ -0.94
U3.28-201ENST00000391249 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 CTHP32929 405 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
U3.28-201ENST00000391249 AXIN1O15169 862 aa9.15□□□□□ -0.94
U3.28-201ENST00000391249 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
U3.28-201ENST00000391249 HPS1Q92902 700 aa9.15□□□□□ -0.94
U3.28-201ENST00000391249 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
U3.28-201ENST00000391249 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
U3.28-201ENST00000391249 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
U3.28-201ENST00000391249 FBXO31Q5XUX0 539 aaPredicted RBP9.14□□□□□ -0.95
U3.28-201ENST00000391249 TSC1Q92574 1164 aa9.13□□□□□ -0.95
U3.28-201ENST00000391249 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
U3.28-201ENST00000391249 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
U3.28-201ENST00000391249 VARSP26640 1264 aaKnown RBP9.11□□□□□ -0.95
U3.28-201ENST00000391249 MPNDQ8N594 471 aa9.11□□□□□ -0.95
U3.28-201ENST00000391249 HELBQ8NG08 1087 aaPredicted RBP9.1□□□□□ -0.95
U3.28-201ENST00000391249 EIF4G1Q04637 1599 aaKnown RBP9.1□□□□□ -0.95
U3.28-201ENST00000391249 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
U3.28-201ENST00000391249 CTDSPL2Q05D32 466 aa9.09□□□□□ -0.95
U3.28-201ENST00000391249 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
U3.28-201ENST00000391249 FOXJ1Q92949 421 aa9.09□□□□□ -0.95
U3.28-201ENST00000391249 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
U3.28-201ENST00000391249 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
U3.28-201ENST00000391249 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
U3.28-201ENST00000391249 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
U3.28-201ENST00000391249 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
U3.28-201ENST00000391249 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
U3.28-201ENST00000391249 WASF2Q9Y6W5 498 aa9.06□□□□□ -0.96
U3.28-201ENST00000391249 ARMC2Q8NEN0 867 aa9.05□□□□□ -0.96
U3.28-201ENST00000391249 FAM174AQ8TBP5 190 aa9.05□□□□□ -0.96
U3.28-201ENST00000391249 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
U3.28-201ENST00000391249 LRRN4Q8WUT4 740 aa9.04□□□□□ -0.96
U3.28-201ENST00000391249 CDK15Q96Q40 435 aa9.04□□□□□ -0.96
U3.28-201ENST00000391249 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
U3.28-201ENST00000391249 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
U3.28-201ENST00000391249 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
U3.28-201ENST00000391249 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
U3.28-201ENST00000391249 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
U3.28-201ENST00000391249 ADH1CP00326 375 aa9.01□□□□□ -0.97
U3.28-201ENST00000391249 BRPF1P55201 1214 aaPredicted RBP9.01□□□□□ -0.97
U3.28-201ENST00000391249 NNTQ13423 1086 aa9.01□□□□□ -0.97
U3.28-201ENST00000391249 NBPF14Q5TI25 921 aa9.01□□□□□ -0.97
U3.28-201ENST00000391249 C1QTNF2Q9BXJ5 285 aa9.01□□□□□ -0.97
U3.28-201ENST00000391249 CAPN5O15484 640 aaPredicted RBP9□□□□□ -0.97
U3.28-201ENST00000391249 GRM5P41594 1212 aa9□□□□□ -0.97
U3.28-201ENST00000391249 AGERQ15109 404 aa9□□□□□ -0.97
U3.28-201ENST00000391249 GPKOWQ92917 476 aaPredicted RBP eCLIP9□□□□□ -0.97
U3.28-201ENST00000391249 KLF16Q9BXK1 252 aaPredicted RBP9□□□□□ -0.97
U3.28-201ENST00000391249 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
U3.28-201ENST00000391249 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
U3.28-201ENST00000391249 PRDM2Q13029 1718 aa9□□□□□ -0.97
U3.28-201ENST00000391249 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
U3.28-201ENST00000391249 NR6A1Q15406 480 aa8.99□□□□□ -0.97
U3.28-201ENST00000391249 IL27Q8NEV9 243 aa8.99□□□□□ -0.97
U3.28-201ENST00000391249 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
U3.28-201ENST00000391249 SENP2Q9HC62 589 aa8.99□□□□□ -0.97
U3.28-201ENST00000391249 AP1G2O75843 785 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 RFC5P40937 340 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 ARID5BQ14865 1188 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 TRIM46Q7Z4K8 759 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
U3.28-201ENST00000391249 TIMP2P16035 220 aa8.97□□□□□ -0.97
U3.28-201ENST00000391249 NR5A1Q13285 461 aa8.97□□□□□ -0.97
U3.28-201ENST00000391249 PDXDC2PQ6P474 469 aa8.97□□□□□ -0.97
U3.28-201ENST00000391249 TRMT44Q8IYL2 757 aaKnown RBP8.97□□□□□ -0.97
U3.28-201ENST00000391249 BAZ1BQ9UIG0 1483 aaKnown RBP8.96□□□□□ -0.97
U3.28-201ENST00000391249 ABCC8Q09428 1581 aa8.96□□□□□ -0.97
U3.28-201ENST00000391249 NR3C2P08235 984 aa8.96□□□□□ -0.98
U3.28-201ENST00000391249 BMP1P13497 986 aa8.96□□□□□ -0.98
U3.28-201ENST00000391249 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
U3.28-201ENST00000391249 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms