RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 RDH13Q8NBN7 331 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 PNMA1Q8ND90 353 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 FAM174AQ8TBP5 190 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZNF592Q92610 1267 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 CLP1Q92989 425 aaKnown RBP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 SPACA7Q96KW9 195 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 TANGO6Q9C0B7 1094 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLC52A1Q9NWF4 448 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 CEP126Q9P2H0 1117 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L3A6NCW0 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L4A6NCW7 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L15C9J2P7 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L10C9JJH3 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L13C9JLJ4 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L12C9JPN9 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L11C9JVI0 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L21D6R901 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L18D6R9N7 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L22D6RA61 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L17D6RBQ6 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L19D6RCP7 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L20D6RJB6 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 C6orf229H3BNL8 230 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 SMAPO00193 183 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 ICMTO60725 284 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 RAB11FIP3O75154 756 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 MAP4K4O95819 1239 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 ATP2B1P20020 1258 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 COL9A1P20849 921 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 GCGRP47871 477 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 ATN1P54259 1190 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 IRX5P78411 483 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L24Q0WX57 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 DPYDQ12882 1025 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZNF211Q13398 564 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 MTMR2Q13614 643 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 NAA30Q147X3 362 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 SF3A1Q15459 793 aaKnown RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 EAPPQ56P03 285 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L2Q6R6M4 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 TAS1R3Q7RTX0 852 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L1Q7RTZ2 530 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 NOP9Q86U38 636 aaKnown RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 ANKMY2Q8IV38 441 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 SULF1Q8IWU6 871 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 LARGE2Q8N3Y3 721 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 PMFBP1Q8TBY8 1022 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 CERKQ8TCT0 537 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 GTF3C2Q8WUA4 911 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 UBE2Q2Q8WVN8 375 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 GPATCH3Q96I76 525 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 FAM161BQ96MY7 647 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 PSMD1Q99460 953 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 PIF1Q9H611 641 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 CAPN10Q9HC96 672 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRKAG2Q9UGJ0 569 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 SEPT3Q9UH03 358 aa2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 IQSEC3Q9UPP2 1182 aaPredicted RBP2.18□□□□□ -2.06
RNU1-78P-201ENST00000391248 FAM196BA6NMK8 535 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 SFI1A8K8P3 1242 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 USP17L5A8MUK1 530 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PPP1R3GB7ZBB8 358 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 SCAMP3O14828 347 aaKnown RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 HOXA2O43364 376 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 LZTS3O60299 673 aaPredicted RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLC10A3P09131 477 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 FBXO45P0C2W1 286 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 TNNI2P48788 182 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 IGBP1P78318 339 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PLCB3Q01970 1234 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 RBL2Q08999 1139 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 RAD51AP2Q09MP3 1159 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 NR1H3Q13133 447 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 MTMR3Q13615 1198 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 EGFLAMQ63HQ2 1017 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 METTL16Q86W50 562 aaKnown RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 NT5DC4Q86YG4 428 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PHTF2Q8N3S3 785 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PIP4P2Q8N4L2 257 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 OGFOD1Q8N543 542 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZNF454Q8N9F8 522 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 HELBQ8NG08 1087 aaPredicted RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 KHSRPQ92945 711 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 TATDN2Q93075 761 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZDHHC16Q969W1 377 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 ADAM33Q9BZ11 813 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 ACBD3Q9H3P7 528 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRDM16Q9HAZ2 1276 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 TSKSQ9UJT2 592 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PNMA3Q9UL41 463 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 WWC3Q9ULE0 1092 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 PCDHGA4Q9Y5G9 962 aa2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 DNMT3AQ9Y6K1 912 aaPredicted RBP2.17□□□□□ -2.06
RNU1-78P-201ENST00000391248 KDM4FA0A1W2PPD8 638 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 H3BRB1 525 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 GALR2O43603 387 aaPredicted RBP2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 DKK1O94907 266 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLC34A2O95436 690 aa2.16□□□□□ -2.06
RNU1-78P-201ENST00000391248 DNAJB2P25686 324 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms