RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 LRRC4BQ9NT99 713 aa2.57□□□□□ -2
TRAJ53-201ENST00000390485 ADH1CP00326 375 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 BCRP11274 1271 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 FECHP22830 423 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 LRP8Q14114 963 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 DOC2BQ14184 412 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 SH3RF1Q7Z6J0 888 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 CCDC155Q8N6L0 562 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 EHBP1Q8NDI1 1231 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 NEDD1Q8NHV4 660 aa2.56□□□□□ -2
TRAJ53-201ENST00000390485 ITGA6P23229 1130 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 WDR4P57081 412 aaKnown RBP2.55□□□□□ -2
TRAJ53-201ENST00000390485 NNTQ13423 1086 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 GAS6Q14393 721 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 PDIA6Q15084 440 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 RSPO4Q2I0M5 234 aaPredicted RBP2.55□□□□□ -2
TRAJ53-201ENST00000390485 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.55□□□□□ -2
TRAJ53-201ENST00000390485 C6orf118Q5T5N4 469 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 MPNDQ8N594 471 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 SLC27A5Q9Y2P5 690 aa2.55□□□□□ -2
TRAJ53-201ENST00000390485 SLC35F4A4IF30 521 aa2.54□□□□□ -2
TRAJ53-201ENST00000390485 RGL2O15211 777 aa2.54□□□□□ -2
TRAJ53-201ENST00000390485 HYAL3O43820 417 aaPredicted RBP2.54□□□□□ -2
TRAJ53-201ENST00000390485 SNRPNP63162 240 aaKnown RBP2.54□□□□□ -2
TRAJ53-201ENST00000390485 JAG1P78504 1218 aa2.54□□□□□ -2
TRAJ53-201ENST00000390485 NKAPLQ5M9Q1 402 aa2.54□□□□□ -2
TRAJ53-201ENST00000390485 RYDENQ9NUL5 291 aaKnown RBP2.54□□□□□ -2
TRAJ53-201ENST00000390485 RCCD1A6NED2 376 aa2.53□□□□□ -2
TRAJ53-201ENST00000390485 DXOO77932 396 aaKnown RBP2.53□□□□□ -2
TRAJ53-201ENST00000390485 CHRNA4P43681 627 aa2.53□□□□□ -2
TRAJ53-201ENST00000390485 CDC14CA4D256 554 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 SPDYE16A6NNV3 312 aaPredicted RBP2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 BMP2P12643 396 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 OSBPP22059 807 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 ATP6V1AP38606 617 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 RNF19BQ6ZMZ0 732 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 HS6ST3Q8IZP7 471 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 LINC00528Q8N1L1 170 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 RBM46Q8TBY0 533 aaKnown RBP2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 MKL2Q9ULH7 1088 aa2.52□□□□□ -2.01
TRAJ53-201ENST00000390485 PLEKHG3A1L390 1219 aa2.51□□□□□ -2.01
TRAJ53-201ENST00000390485 ECM2O94769 699 aaPredicted RBP2.51□□□□□ -2.01
TRAJ53-201ENST00000390485 FUT2Q10981 343 aa2.51□□□□□ -2.01
TRAJ53-201ENST00000390485 ACDQ96AP0 544 aa2.51□□□□□ -2.01
TRAJ53-201ENST00000390485 DNAJC5Q9H3Z4 198 aa2.51□□□□□ -2.01
TRAJ53-201ENST00000390485 DYRK3O43781 588 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 UPP2O95045 317 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 NKX1-1Q15270 411 aaPredicted RBP2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 MEIOBQ8N635 442 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 ZFAND3Q9H8U3 227 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 MBIPQ9NS73 344 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 ADGRG1Q9Y653 693 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 TLL2Q9Y6L7 1015 aa2.5□□□□□ -2.01
TRAJ53-201ENST00000390485 IGF1RP08069 1367 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 TTLL8A6PVC2 850 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 OIP5O43482 229 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 ZIC2O95409 532 aaPredicted RBP2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 PRSS36Q5K4E3 855 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 RSPH4AQ5TD94 716 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 CCDC24Q8N4L8 307 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 ITPKCQ96DU7 683 aa2.49□□□□□ -2.01
TRAJ53-201ENST00000390485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.48□□□□□ -2.01
TRAJ53-201ENST00000390485 SH3BP2P78314 561 aa2.48□□□□□ -2.01
TRAJ53-201ENST00000390485 GRIN2CQ14957 1233 aa2.48□□□□□ -2.01
TRAJ53-201ENST00000390485 SUV39H2Q9H5I1 410 aa2.48□□□□□ -2.01
TRAJ53-201ENST00000390485 GRXCR2A6NFK2 248 aa2.47□□□□□ -2.01
TRAJ53-201ENST00000390485 KRTAP9-7A8MTY7 169 aa2.47□□□□□ -2.01
TRAJ53-201ENST00000390485 GATA4P43694 442 aa2.47□□□□□ -2.01
TRAJ53-201ENST00000390485 LINC00114Q6XXX2 140 aa2.47□□□□□ -2.01
TRAJ53-201ENST00000390485 TSEN34Q9BSV6 310 aaKnown RBP2.47□□□□□ -2.01
TRAJ53-201ENST00000390485 FIGNL2A6NMB9 653 aa2.46□□□□□ -2.02
TRAJ53-201ENST00000390485 HOXB4P17483 251 aaPredicted RBP2.46□□□□□ -2.02
TRAJ53-201ENST00000390485 VARSP26640 1264 aaKnown RBP2.46□□□□□ -2.02
TRAJ53-201ENST00000390485 PTCRAQ6ISU1 281 aaPredicted RBP2.46□□□□□ -2.02
TRAJ53-201ENST00000390485 RNF114Q9Y508 228 aa2.46□□□□□ -2.02
TRAJ53-201ENST00000390485 SENP3-EIF4A1A0A087X0R7 540 aa2.45□□□□□ -2.02
TRAJ53-201ENST00000390485 Q3C1V9 767 aa2.45□□□□□ -2.02
TRAJ53-201ENST00000390485 USB1Q9BQ65 265 aaKnown RBP2.45□□□□□ -2.02
TRAJ53-201ENST00000390485 TPSG1Q9NRR2 321 aa2.45□□□□□ -2.02
TRAJ53-201ENST00000390485 SHISA8B8ZZ34 492 aa2.44□□□□□ -2.02
TRAJ53-201ENST00000390485 NR3C2P08235 984 aa2.44□□□□□ -2.02
TRAJ53-201ENST00000390485 KRTAP1-1Q07627 177 aa2.44□□□□□ -2.02
TRAJ53-201ENST00000390485 CDK15Q96Q40 435 aa2.44□□□□□ -2.02
TRAJ53-201ENST00000390485 CUEDC1Q9NWM3 386 aaPredicted RBP2.44□□□□□ -2.02
TRAJ53-201ENST00000390485 PIK3R2O00459 728 aa2.43□□□□□ -2.02
TRAJ53-201ENST00000390485 GNB5O14775 395 aa2.43□□□□□ -2.02
TRAJ53-201ENST00000390485 SPTLC1O15269 473 aa2.43□□□□□ -2.02
TRAJ53-201ENST00000390485 GCGRP47871 477 aa2.43□□□□□ -2.02
TRAJ53-201ENST00000390485 NR5A1Q13285 461 aa2.43□□□□□ -2.02
TRAJ53-201ENST00000390485 SPINT1O43278 529 aa2.42□□□□□ -2.02
TRAJ53-201ENST00000390485 ELNP15502 786 aa2.42□□□□□ -2.02
TRAJ53-201ENST00000390485 PKD2Q13563 968 aa2.42□□□□□ -2.02
TRAJ53-201ENST00000390485 CADPS2Q86UW7 1296 aa2.42□□□□□ -2.02
TRAJ53-201ENST00000390485 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
TRAJ53-201ENST00000390485 TAL1P17542 331 aaPredicted RBP2.41□□□□□ -2.02
TRAJ53-201ENST00000390485 FAM161AQ3B820 660 aa2.41□□□□□ -2.02
TRAJ53-201ENST00000390485 C1orf229Q6ZS94 237 aaPredicted RBP2.41□□□□□ -2.02
TRAJ53-201ENST00000390485 GMCL1Q96IK5 515 aa2.41□□□□□ -2.02
TRAJ53-201ENST00000390485 RRAGCQ9HB90 399 aa2.41□□□□□ -2.02
TRAJ53-201ENST00000390485 NOP53Q9NZM5 478 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms