RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 HDGFL1Q5TGJ6 251 aa27.31■■□□□ 1.96
LRIG1-202ENST00000383703 FCHSD2O94868 740 aa27.31■■□□□ 1.96
LRIG1-202ENST00000383703 TPM3P06753 285 aa27.31■■□□□ 1.96
LRIG1-202ENST00000383703 VPS37DQ86XT2 251 aa27.3■■□□□ 1.96
LRIG1-202ENST00000383703 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
LRIG1-202ENST00000383703 FSD1Q9BTV5 496 aa27.3■■□□□ 1.96
LRIG1-202ENST00000383703 RRS1Q15050 365 aaKnown RBP27.3■■□□□ 1.96
LRIG1-202ENST00000383703 PES1O00541 588 aaKnown RBP27.29■■□□□ 1.96
LRIG1-202ENST00000383703 NOL10Q9BSC4 688 aaKnown RBP27.29■■□□□ 1.96
LRIG1-202ENST00000383703 CCT4P50991 539 aaKnown RBP27.29■■□□□ 1.96
LRIG1-202ENST00000383703 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
LRIG1-202ENST00000383703 SLC26A8Q96RN1 970 aa27.28■■□□□ 1.96
LRIG1-202ENST00000383703 RABEP1Q15276 862 aa27.28■■□□□ 1.96
LRIG1-202ENST00000383703 NFXL1Q6ZNB6 911 aa27.28■■□□□ 1.96
LRIG1-202ENST00000383703 AMOTL1Q8IY63 956 aa27.28■■□□□ 1.96
LRIG1-202ENST00000383703 NEK4P51957 841 aa27.27■■□□□ 1.96
LRIG1-202ENST00000383703 TMPOP42166 694 aaKnown RBP27.27■■□□□ 1.96
LRIG1-202ENST00000383703 WASHC4Q2M389 1173 aa27.27■■□□□ 1.96
LRIG1-202ENST00000383703 AMER1Q5JTC6 1135 aaPredicted RBP27.27■■□□□ 1.96
LRIG1-202ENST00000383703 VPS53Q5VIR6 699 aa27.27■■□□□ 1.96
LRIG1-202ENST00000383703 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.26■■□□□ 1.95
LRIG1-202ENST00000383703 PSMA5P28066 241 aa27.25■■□□□ 1.95
LRIG1-202ENST00000383703 RALYLQ86SE5 291 aaKnown RBP27.25■■□□□ 1.95
LRIG1-202ENST00000383703 NOC3LQ8WTT2 800 aaKnown RBP27.25■■□□□ 1.95
LRIG1-202ENST00000383703 FOSBP53539 338 aa27.25■■□□□ 1.95
LRIG1-202ENST00000383703 TRAK2O60296 914 aa27.24■■□□□ 1.95
LRIG1-202ENST00000383703 NFE2L2Q16236 605 aa27.24■■□□□ 1.95
LRIG1-202ENST00000383703 ZNF428Q96B54 188 aa27.23■■□□□ 1.95
LRIG1-202ENST00000383703 CHD1LQ86WJ1 897 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 MCM2P49736 904 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 NUDT16Q96DE0 195 aaKnown RBP27.22■■□□□ 1.95
LRIG1-202ENST00000383703 ERICH2A1L162 156 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 MRE11P49959 708 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 CCDC61Q9Y6R9 512 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 ZNF530Q6P9A1 599 aaPredicted RBP27.22■■□□□ 1.95
LRIG1-202ENST00000383703 ERC1Q8IUD2 1116 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 ADGRL1O94910 1474 aa27.22■■□□□ 1.95
LRIG1-202ENST00000383703 SASS6Q6UVJ0 657 aa27.21■■□□□ 1.95
LRIG1-202ENST00000383703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.21■■□□□ 1.95
LRIG1-202ENST00000383703 CD109Q6YHK3 1445 aa27.21■■□□□ 1.95
LRIG1-202ENST00000383703 TATP17735 454 aaPredicted RBP27.21■■□□□ 1.95
LRIG1-202ENST00000383703 TSR1Q2NL82 804 aaKnown RBP27.21■■□□□ 1.95
LRIG1-202ENST00000383703 CCDC73Q6ZRK6 1079 aa27.21■■□□□ 1.95
LRIG1-202ENST00000383703 LRRCC1Q9C099 1032 aa27.2■■□□□ 1.95
LRIG1-202ENST00000383703 SRCIN1Q9C0H9 1055 aa27.2■■□□□ 1.95
LRIG1-202ENST00000383703 TPM1P09493 284 aa27.2■■□□□ 1.94
LRIG1-202ENST00000383703 ADGRF5Q8IZF2 1346 aa27.2■■□□□ 1.94
LRIG1-202ENST00000383703 MSH5O43196 834 aa27.19■■□□□ 1.94
LRIG1-202ENST00000383703 HSP90AA2PQ14568 343 aaPredicted RBP27.19■■□□□ 1.94
LRIG1-202ENST00000383703 ZNF608Q9ULD9 1512 aaPredicted RBP27.19■■□□□ 1.94
LRIG1-202ENST00000383703 HIP1O00291 1037 aa27.18■■□□□ 1.94
LRIG1-202ENST00000383703 DNAJC2Q99543 621 aaKnown RBP27.18■■□□□ 1.94
LRIG1-202ENST00000383703 TMEM57Q8N5G2 664 aa27.17■■□□□ 1.94
LRIG1-202ENST00000383703 WAPLQ7Z5K2 1190 aa27.17■■□□□ 1.94
LRIG1-202ENST00000383703 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
LRIG1-202ENST00000383703 HOOK1Q9UJC3 728 aaKnown RBP27.16■■□□□ 1.94
LRIG1-202ENST00000383703 NASPP49321 788 aaPredicted RBP27.15■■□□□ 1.94
LRIG1-202ENST00000383703 SAFBQ15424 915 aaKnown RBP eCLIP27.15■■□□□ 1.94
LRIG1-202ENST00000383703 GOLGA6L1Q8N7Z2 621 aa27.15■■□□□ 1.94
LRIG1-202ENST00000383703 ZNF592Q92610 1267 aa27.14■■□□□ 1.94
LRIG1-202ENST00000383703 TPM2P07951 284 aa27.14■■□□□ 1.94
LRIG1-202ENST00000383703 CAVIN1Q6NZI2 390 aaKnown RBP27.14■■□□□ 1.94
LRIG1-202ENST00000383703 FAM135AQ9P2D6 1515 aa27.14■■□□□ 1.93
LRIG1-202ENST00000383703 C20orf194Q5TEA3 1177 aa27.13■■□□□ 1.93
LRIG1-202ENST00000383703 CCDC27Q2M243 656 aa27.13■■□□□ 1.93
LRIG1-202ENST00000383703 MBD3O95983 291 aa27.13■■□□□ 1.93
LRIG1-202ENST00000383703 THUMPD2Q9BTF0 503 aaKnown RBP27.13■■□□□ 1.93
LRIG1-202ENST00000383703 RARSP54136 660 aaKnown RBP27.12■■□□□ 1.93
LRIG1-202ENST00000383703 RAD21O60216 631 aa27.12■■□□□ 1.93
LRIG1-202ENST00000383703 FBXW7Q969H0 707 aa27.12■■□□□ 1.93
LRIG1-202ENST00000383703 DHX16O60231 1041 aaKnown RBP27.11■■□□□ 1.93
LRIG1-202ENST00000383703 ANKLE2Q86XL3 938 aa27.11■■□□□ 1.93
LRIG1-202ENST00000383703 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
LRIG1-202ENST00000383703 PRPF40AO75400 957 aaKnown RBP27.11■■□□□ 1.93
LRIG1-202ENST00000383703 FAM43AQ8N2R8 423 aa27.11■■□□□ 1.93
LRIG1-202ENST00000383703 RNF214Q8ND24 703 aa27.11■■□□□ 1.93
LRIG1-202ENST00000383703 RPAP2Q8IXW5 612 aaPredicted RBP27.1■■□□□ 1.93
LRIG1-202ENST00000383703 CCAR2Q8N163 923 aaKnown RBP27.1■■□□□ 1.93
LRIG1-202ENST00000383703 NKTRP30414 1462 aaKnown RBP27.1■■□□□ 1.93
LRIG1-202ENST00000383703 GPATCH8Q9UKJ3 1502 aaKnown RBP27.1■■□□□ 1.93
LRIG1-202ENST00000383703 K7ELQ4 463 aaPredicted RBP27.1■■□□□ 1.93
LRIG1-202ENST00000383703 KIF6Q6ZMV9 814 aa27.1■■□□□ 1.93
LRIG1-202ENST00000383703 PTPRKQ15262 1439 aa27.09■■□□□ 1.93
LRIG1-202ENST00000383703 RBM42Q9BTD8 480 aaKnown RBP27.09■■□□□ 1.93
LRIG1-202ENST00000383703 TRIM34Q9BYJ4 488 aa27.09■■□□□ 1.93
LRIG1-202ENST00000383703 CCDC47Q96A33 483 aaKnown RBP27.09■■□□□ 1.93
LRIG1-202ENST00000383703 ANKRD20A12PQ8NF67 263 aa27.09■■□□□ 1.93
LRIG1-202ENST00000383703 STRN4Q9NRL3 753 aa27.09■■□□□ 1.93
LRIG1-202ENST00000383703 PDCP20941 246 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 SSH1Q8WYL5 1049 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 TBC1D2BQ9UPU7 963 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 POGZQ7Z3K3 1410 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 CABP4P57796 275 aa27.08■■□□□ 1.93
LRIG1-202ENST00000383703 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.08■■□□□ 1.93
LRIG1-202ENST00000383703 RBM33Q96EV2 1170 aaKnown RBP27.08■■□□□ 1.92
LRIG1-202ENST00000383703 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
LRIG1-202ENST00000383703 SPG7Q9UQ90 795 aa27.07■■□□□ 1.92
LRIG1-202ENST00000383703 SIL1Q9H173 461 aa27.07■■□□□ 1.92
LRIG1-202ENST00000383703 CWC22Q9HCG8 908 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms