RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
CD9-202ENST00000382515 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
CD9-202ENST00000382515 TTC21BQ7Z4L5 1316 aa24.41■■□□□ 1.5
CD9-202ENST00000382515 SSH2Q76I76 1423 aa24.41■■□□□ 1.5
CD9-202ENST00000382515 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
CD9-202ENST00000382515 A0A1W2PP64 1363 aa24.38■■□□□ 1.49
CD9-202ENST00000382515 EDC4Q6P2E9 1401 aaKnown RBP24.37■■□□□ 1.49
CD9-202ENST00000382515 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
CD9-202ENST00000382515 NLRP6P59044 892 aa24.35■■□□□ 1.49
CD9-202ENST00000382515 CCDC7Q96M83 1385 aa24.34■■□□□ 1.49
CD9-202ENST00000382515 WASHC2AQ641Q2 1341 aa24.34■■□□□ 1.49
CD9-202ENST00000382515 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
CD9-202ENST00000382515 PANK3Q9H999 370 aa24.33■■□□□ 1.49
CD9-202ENST00000382515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.32■■□□□ 1.48
CD9-202ENST00000382515 NUTM2BA6NNL0 878 aaPredicted RBP24.31■■□□□ 1.48
CD9-202ENST00000382515 NUTM2EB1AL46 878 aaPredicted RBP24.31■■□□□ 1.48
CD9-202ENST00000382515 NUTM2AQ8IVF1 878 aaPredicted RBP24.31■■□□□ 1.48
CD9-202ENST00000382515 KCNH5Q8NCM2 988 aa24.31■■□□□ 1.48
CD9-202ENST00000382515 USP31Q70CQ4 1352 aa24.3■■□□□ 1.48
CD9-202ENST00000382515 CARD14Q9BXL6 1004 aa24.3■■□□□ 1.48
CD9-202ENST00000382515 SHPRHQ149N8 1683 aa24.29■■□□□ 1.48
CD9-202ENST00000382515 MEX3CQ5U5Q3 659 aaKnown RBP24.28■■□□□ 1.48
CD9-202ENST00000382515 USP19O94966 1318 aa24.28■■□□□ 1.48
CD9-202ENST00000382515 CGNL1Q0VF96 1302 aa24.28■■□□□ 1.48
CD9-202ENST00000382515 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
CD9-202ENST00000382515 FYB1O15117 783 aa24.27■■□□□ 1.48
CD9-202ENST00000382515 GCP02774 474 aa24.27■■□□□ 1.48
CD9-202ENST00000382515 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
CD9-202ENST00000382515 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
CD9-202ENST00000382515 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
CD9-202ENST00000382515 COG3Q96JB2 828 aa24.26■■□□□ 1.47
CD9-202ENST00000382515 COL22A1Q8NFW1 1626 aaPredicted RBP24.25■■□□□ 1.47
CD9-202ENST00000382515 NME9Q86XW9 330 aa24.25■■□□□ 1.47
CD9-202ENST00000382515 ADAMTS2O95450 1211 aa24.24■■□□□ 1.47
CD9-202ENST00000382515 AKAP12Q02952 1782 aa24.22■■□□□ 1.47
CD9-202ENST00000382515 ALS2Q96Q42 1657 aa24.22■■□□□ 1.47
CD9-202ENST00000382515 NGLY1Q96IV0 654 aa24.22■■□□□ 1.47
CD9-202ENST00000382515 NSD3Q9BZ95 1437 aa24.21■■□□□ 1.47
CD9-202ENST00000382515 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
CD9-202ENST00000382515 FNBP4Q8N3X1 1017 aaPredicted RBP24.21■■□□□ 1.47
CD9-202ENST00000382515 MED1Q15648 1581 aaPredicted RBP24.2■■□□□ 1.46
CD9-202ENST00000382515 CPDO75976 1380 aa24.19■■□□□ 1.46
CD9-202ENST00000382515 ZNF772Q68DY9 489 aaPredicted RBP24.19■■□□□ 1.46
CD9-202ENST00000382515 C8orf37Q96NL8 207 aa24.19■■□□□ 1.46
CD9-202ENST00000382515 MON2Q7Z3U7 1717 aa24.18■■□□□ 1.46
CD9-202ENST00000382515 NSD2O96028 1365 aa24.18■■□□□ 1.46
CD9-202ENST00000382515 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
CD9-202ENST00000382515 FAM83GA6ND36 823 aa24.17■■□□□ 1.46
CD9-202ENST00000382515 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
CD9-202ENST00000382515 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
CD9-202ENST00000382515 GGNBP2Q9H3C7 697 aa24.17■■□□□ 1.46
CD9-202ENST00000382515 PRDM11Q9NQV5 511 aa24.17■■□□□ 1.46
CD9-202ENST00000382515 LRP6O75581 1613 aa24.17■■□□□ 1.46
CD9-202ENST00000382515 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
CD9-202ENST00000382515 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
CD9-202ENST00000382515 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
CD9-202ENST00000382515 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.45
CD9-202ENST00000382515 AMER1Q5JTC6 1135 aaPredicted RBP24.14■■□□□ 1.45
CD9-202ENST00000382515 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.45
CD9-202ENST00000382515 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
CD9-202ENST00000382515 MYOM1P52179 1685 aa24.14■■□□□ 1.45
CD9-202ENST00000382515 NPC1L1Q9UHC9 1359 aa24.14■■□□□ 1.45
CD9-202ENST00000382515 KIAA0232Q92628 1395 aa24.13■■□□□ 1.45
CD9-202ENST00000382515 SLIT3O75094 1523 aa24.12■■□□□ 1.45
CD9-202ENST00000382515 USP21Q9UK80 565 aa24.12■■□□□ 1.45
CD9-202ENST00000382515 AFF2P51816 1311 aa24.11■■□□□ 1.45
CD9-202ENST00000382515 AATKQ6ZMQ8 1374 aa24.11■■□□□ 1.45
CD9-202ENST00000382515 UNC5CLQ8IV45 518 aa24.1■■□□□ 1.45
CD9-202ENST00000382515 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
CD9-202ENST00000382515 MORC1Q86VD1 984 aa24.08■■□□□ 1.45
CD9-202ENST00000382515 BTG4Q9NY30 223 aa24.08■■□□□ 1.45
CD9-202ENST00000382515 TRPC5Q9UL62 973 aaPredicted RBP24.08■■□□□ 1.45
CD9-202ENST00000382515 SOX12O15370 315 aa24.07■■□□□ 1.44
CD9-202ENST00000382515 SLIT2O94813 1529 aa24.06■■□□□ 1.44
CD9-202ENST00000382515 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
CD9-202ENST00000382515 QTRT2Q9H974 415 aaKnown RBP24.06■■□□□ 1.44
CD9-202ENST00000382515 RGS17Q9UGC6 210 aaPredicted RBP24.06■■□□□ 1.44
CD9-202ENST00000382515 KIF24Q5T7B8 1368 aa24.05■■□□□ 1.44
CD9-202ENST00000382515 EVA1CP58658 441 aa24.05■■□□□ 1.44
CD9-202ENST00000382515 CHRNA2Q15822 529 aa24.05■■□□□ 1.44
CD9-202ENST00000382515 IP6K1Q92551 441 aa24.05■■□□□ 1.44
CD9-202ENST00000382515 USP54Q70EL1 1684 aa24.03■■□□□ 1.44
CD9-202ENST00000382515 BCL9LQ86UU0 1499 aa24.03■■□□□ 1.44
CD9-202ENST00000382515 VPS72Q15906 364 aa24.03■■□□□ 1.44
CD9-202ENST00000382515 AMPHP49418 695 aa24.02■■□□□ 1.44
CD9-202ENST00000382515 MAP3K19Q56UN5 1328 aa24.01■■□□□ 1.43
CD9-202ENST00000382515 NFAT5O94916 1531 aa24■■□□□ 1.43
CD9-202ENST00000382515 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
CD9-202ENST00000382515 CC2D1BQ5T0F9 858 aaKnown RBP24■■□□□ 1.43
CD9-202ENST00000382515 PHRF1Q9P1Y6 1649 aaKnown RBP23.99■■□□□ 1.43
CD9-202ENST00000382515 CRYBG1Q9Y4K1 1723 aa23.99■■□□□ 1.43
CD9-202ENST00000382515 RBM6P78332 1123 aaKnown RBP23.99■■□□□ 1.43
CD9-202ENST00000382515 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
CD9-202ENST00000382515 RXRBP28702 533 aa23.98■■□□□ 1.43
CD9-202ENST00000382515 GJD4Q96KN9 370 aaPredicted RBP23.98■■□□□ 1.43
CD9-202ENST00000382515 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
CD9-202ENST00000382515 RTL1A6NKG5 1358 aa23.98■■□□□ 1.43
CD9-202ENST00000382515 COL14A1Q05707 1796 aaKnown RBP23.98■■□□□ 1.43
CD9-202ENST00000382515 ABCC6O95255 1503 aa23.97■■□□□ 1.43
CD9-202ENST00000382515 HOXC9P31274 260 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms