RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
VLDLR-202ENST00000382099 KDM5DQ9BY66 1539 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 APPP05067 770 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 LMBRD1Q9NUN5 540 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
VLDLR-202ENST00000382099 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.54
VLDLR-202ENST00000382099 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
VLDLR-202ENST00000382099 FEZ1Q99689 392 aa18.39■□□□□ 0.53
VLDLR-202ENST00000382099 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
VLDLR-202ENST00000382099 GTF2F1P35269 517 aaKnown RBP eCLIP18.39■□□□□ 0.53
VLDLR-202ENST00000382099 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
VLDLR-202ENST00000382099 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
VLDLR-202ENST00000382099 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
VLDLR-202ENST00000382099 GABPB1Q06547 395 aaPredicted RBP18.38■□□□□ 0.53
VLDLR-202ENST00000382099 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
VLDLR-202ENST00000382099 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
VLDLR-202ENST00000382099 PTPRGP23470 1445 aa18.37■□□□□ 0.53
VLDLR-202ENST00000382099 GPT2Q8TD30 523 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 PKP1Q13835 747 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 USP25Q9UHP3 1055 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
VLDLR-202ENST00000382099 SLFN14P0C7P3 912 aa18.35■□□□□ 0.53
VLDLR-202ENST00000382099 CAPN2P17655 700 aa18.35■□□□□ 0.53
VLDLR-202ENST00000382099 TRPM1Q7Z4N2 1603 aa18.35■□□□□ 0.53
VLDLR-202ENST00000382099 NUCB2P80303 420 aa18.34■□□□□ 0.53
VLDLR-202ENST00000382099 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
VLDLR-202ENST00000382099 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
VLDLR-202ENST00000382099 KIF16BQ96L93 1317 aa18.34■□□□□ 0.53
VLDLR-202ENST00000382099 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
VLDLR-202ENST00000382099 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
VLDLR-202ENST00000382099 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
VLDLR-202ENST00000382099 TMX1Q9H3N1 280 aa18.33■□□□□ 0.53
VLDLR-202ENST00000382099 ABCA8O94911 1581 aa18.33■□□□□ 0.52
VLDLR-202ENST00000382099 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
VLDLR-202ENST00000382099 ATP10BO94823 1461 aa18.33■□□□□ 0.52
VLDLR-202ENST00000382099 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
VLDLR-202ENST00000382099 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
VLDLR-202ENST00000382099 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
VLDLR-202ENST00000382099 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
VLDLR-202ENST00000382099 HDAC5Q9UQL6 1122 aa18.31■□□□□ 0.52
VLDLR-202ENST00000382099 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
VLDLR-202ENST00000382099 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
VLDLR-202ENST00000382099 TERF2Q15554 542 aa18.3■□□□□ 0.52
VLDLR-202ENST00000382099 CHRM1P11229 460 aaPredicted RBP18.29■□□□□ 0.52
VLDLR-202ENST00000382099 SLC20A2Q08357 652 aa18.29■□□□□ 0.52
VLDLR-202ENST00000382099 ANKRD7Q92527 254 aa18.29■□□□□ 0.52
VLDLR-202ENST00000382099 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
VLDLR-202ENST00000382099 INSRP06213 1382 aa18.29■□□□□ 0.52
VLDLR-202ENST00000382099 DISP3Q9P2K9 1392 aa18.28■□□□□ 0.52
VLDLR-202ENST00000382099 RARSP54136 660 aaKnown RBP18.28■□□□□ 0.52
VLDLR-202ENST00000382099 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
VLDLR-202ENST00000382099 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
VLDLR-202ENST00000382099 ADCY5O95622 1261 aa18.28■□□□□ 0.52
VLDLR-202ENST00000382099 NAA30Q147X3 362 aaPredicted RBP18.28■□□□□ 0.52
VLDLR-202ENST00000382099 ITPRIPQ8IWB1 547 aa18.27■□□□□ 0.52
VLDLR-202ENST00000382099 MLECQ14165 292 aa18.27■□□□□ 0.51
VLDLR-202ENST00000382099 SPC24Q8NBT2 197 aa18.27■□□□□ 0.51
VLDLR-202ENST00000382099 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
VLDLR-202ENST00000382099 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
VLDLR-202ENST00000382099 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 KIF2CQ99661 725 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
VLDLR-202ENST00000382099 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 TESK2Q96S53 571 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 NUP160Q12769 1436 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 COL17A1Q9UMD9 1497 aaPredicted RBP18.25■□□□□ 0.51
VLDLR-202ENST00000382099 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 A2MP01023 1474 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 CLEC17AQ6ZS10 378 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 TSPYL1Q9H0U9 437 aa18.25■□□□□ 0.51
VLDLR-202ENST00000382099 LOC102724159A0A0B4J2E5 919 aa18.24■□□□□ 0.51
VLDLR-202ENST00000382099 TMF1P82094 1093 aa18.24■□□□□ 0.51
VLDLR-202ENST00000382099 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
VLDLR-202ENST00000382099 PWP2Q15269 919 aaKnown RBP18.24■□□□□ 0.51
VLDLR-202ENST00000382099 RSPH14Q9UHP6 348 aa18.24■□□□□ 0.51
VLDLR-202ENST00000382099 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
VLDLR-202ENST00000382099 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
VLDLR-202ENST00000382099 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
VLDLR-202ENST00000382099 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
VLDLR-202ENST00000382099 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
VLDLR-202ENST00000382099 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
VLDLR-202ENST00000382099 FEZ2Q9UHY8 353 aaPredicted RBP18.22■□□□□ 0.51
VLDLR-202ENST00000382099 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
VLDLR-202ENST00000382099 PYCARDQ9ULZ3 195 aa18.22■□□□□ 0.51
VLDLR-202ENST00000382099 PRDM15P57071 1507 aaPredicted RBP18.22■□□□□ 0.51
VLDLR-202ENST00000382099 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
VLDLR-202ENST00000382099 MBD3O95983 291 aa18.21■□□□□ 0.51
VLDLR-202ENST00000382099 ST7Q9NRC1 585 aa18.21■□□□□ 0.51
VLDLR-202ENST00000382099 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms