RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CEP63Q96MT8 703 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 LRRCC1Q9C099 1032 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 FIBPO43427 364 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 STIM1Q13586 685 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 TICAM2Q86XR7 235 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 WRNQ14191 1432 aaPredicted RBP eCLIP6.97□□□□□ -1.29
RFX3-204ENST00000382004 PRPF40AO75400 957 aaKnown RBP6.97□□□□□ -1.29
RFX3-204ENST00000382004 CCDC91Q7Z6B0 441 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 ZNF396Q96N95 335 aaPredicted RBP6.97□□□□□ -1.29
RFX3-204ENST00000382004 MINK1Q8N4C8 1332 aaPredicted RBP6.97□□□□□ -1.29
RFX3-204ENST00000382004 PIP4K2AP48426 406 aaPredicted RBP6.96□□□□□ -1.29
RFX3-204ENST00000382004 CCDC102AQ96A19 550 aa6.96□□□□□ -1.29
RFX3-204ENST00000382004 TRAK2O60296 914 aa6.96□□□□□ -1.29
RFX3-204ENST00000382004 USP8P40818 1118 aa6.96□□□□□ -1.29
RFX3-204ENST00000382004 MAP2K1Q02750 393 aaPredicted RBP6.96□□□□□ -1.29
RFX3-204ENST00000382004 NFKBIBQ15653 356 aa6.96□□□□□ -1.29
RFX3-204ENST00000382004 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 ERLIN1O75477 346 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 UBTFL1P0CB47 393 aaPredicted RBP6.96□□□□□ -1.3
RFX3-204ENST00000382004 DESP17661 470 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 HNRNPMP52272 730 aaKnown RBP eCLIP6.96□□□□□ -1.3
RFX3-204ENST00000382004 CFAP45Q9UL16 551 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 DIAPH1O60610 1272 aaKnown RBP6.96□□□□□ -1.3
RFX3-204ENST00000382004 ANKRD30AQ9BXX3 1397 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 MPHOSPH10O00566 681 aaKnown RBP6.96□□□□□ -1.3
RFX3-204ENST00000382004 STK3Q13188 491 aa6.96□□□□□ -1.3
RFX3-204ENST00000382004 SSBP05455 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
RFX3-204ENST00000382004 ANAPC15P60006 121 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 SLC26A8Q96RN1 970 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 CDC45O75419 566 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 EVC2Q86UK5 1308 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 HMOX1P09601 288 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 STAMBPO95630 424 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 TXLNBQ8N3L3 684 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 BCCIPQ9P287 314 aaKnown RBP eCLIP6.95□□□□□ -1.3
RFX3-204ENST00000382004 KIF7Q2M1P5 1343 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 KIAA1328Q86T90 577 aa6.95□□□□□ -1.3
RFX3-204ENST00000382004 PUS7Q96PZ0 661 aaKnown RBP6.95□□□□□ -1.3
RFX3-204ENST00000382004 RAB3GAP2Q9H2M9 1393 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 TNMDQ9H2S6 317 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 NEK4P51957 841 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 TTC39AQ5SRH9 613 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 PSMD1Q99460 953 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 ST20-MTHFSA0A0A6YYL1 179 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 ME1P48163 572 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
RFX3-204ENST00000382004 JAKMIP3Q5VZ66 844 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 RAPGEF4Q8WZA2 1011 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 IQCEQ6IPM2 695 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 MBD3O95983 291 aa6.94□□□□□ -1.3
RFX3-204ENST00000382004 UQCRHLA0A096LP55 91 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 UQCRHP07919 91 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 PDCP20941 246 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 RBM5P52756 815 aaKnown RBP eCLIP6.93□□□□□ -1.3
RFX3-204ENST00000382004 NUP133Q8WUM0 1156 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 JMYQ8N9B5 988 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 TAF4BQ92750 862 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 KIF6Q6ZMV9 814 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 CCDC192P0DO97 292 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 PANK1Q8TE04 598 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 CNNM1Q9NRU3 951 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 CCDC69A6NI79 296 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 ERC1Q8IUD2 1116 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 SOGA3Q5TF21 947 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 PIBF1Q8WXW3 757 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
RFX3-204ENST00000382004 SURF6O75683 361 aaKnown RBP6.92□□□□□ -1.3
RFX3-204ENST00000382004 NUTM2GQ5VZR2 741 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 GOPCQ9HD26 462 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 PPM1EQ8WY54 764 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 DDX23Q9BUQ8 820 aaKnown RBP6.92□□□□□ -1.3
RFX3-204ENST00000382004 CBFA2T2O43439 604 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 ZNF76P36508 570 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 TRIM22Q8IYM9 498 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 TMCO3Q6UWJ1 677 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 SERPINA10Q9UK55 444 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 FANCIQ9NVI1 1328 aa6.92□□□□□ -1.3
RFX3-204ENST00000382004 EIF5P55010 431 aaKnown RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 NLRP2Q9NX02 1062 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 EPB41L2O43491 1005 aaKnown RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 COMMD10Q9Y6G5 202 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 MAP4K4O95819 1239 aaPredicted RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 TRIM21P19474 475 aaKnown RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 AEBP1Q8IUX7 1158 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 BMP2KQ9NSY1 1161 aaPredicted RBP6.91□□□□□ -1.3
RFX3-204ENST00000382004 CRACR2AQ9BSW2 395 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 SHTN1A0MZ66 631 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 GNAI1P63096 354 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 TTC16Q8NEE8 873 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 CCDC148Q8NFR7 591 aa6.91□□□□□ -1.3
RFX3-204ENST00000382004 CARMIL1Q5VZK9 1371 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms