RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
HDHD3-202ENST00000374180 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.16
HDHD3-202ENST00000374180 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.16
HDHD3-202ENST00000374180 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
HDHD3-202ENST00000374180 USP6P35125 1406 aa22.27■■□□□ 1.16
HDHD3-202ENST00000374180 TRPM3Q9HCF6 1732 aaPredicted RBP22.27■■□□□ 1.15
HDHD3-202ENST00000374180 COL22A1Q8NFW1 1626 aaPredicted RBP22.26■■□□□ 1.15
HDHD3-202ENST00000374180 CPSF1Q10570 1443 aaKnown RBP22.26■■□□□ 1.15
HDHD3-202ENST00000374180 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
HDHD3-202ENST00000374180 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
HDHD3-202ENST00000374180 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
HDHD3-202ENST00000374180 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
HDHD3-202ENST00000374180 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
HDHD3-202ENST00000374180 ALS2Q96Q42 1657 aa22.22■■□□□ 1.15
HDHD3-202ENST00000374180 TTC21BQ7Z4L5 1316 aa22.22■■□□□ 1.15
HDHD3-202ENST00000374180 NGLY1Q96IV0 654 aa22.22■■□□□ 1.15
HDHD3-202ENST00000374180 CD163L1Q9NR16 1453 aa22.21■■□□□ 1.15
HDHD3-202ENST00000374180 NLRP13Q86W25 1043 aa22.21■■□□□ 1.15
HDHD3-202ENST00000374180 SSH2Q76I76 1423 aa22.2■■□□□ 1.15
HDHD3-202ENST00000374180 TTC21AQ8NDW8 1320 aa22.19■■□□□ 1.14
HDHD3-202ENST00000374180 NLRP6P59044 892 aa22.19■■□□□ 1.14
HDHD3-202ENST00000374180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.19■■□□□ 1.14
HDHD3-202ENST00000374180 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
HDHD3-202ENST00000374180 A0A1W2PP64 1363 aa22.19■■□□□ 1.14
HDHD3-202ENST00000374180 AKAP12Q02952 1782 aa22.17■■□□□ 1.14
HDHD3-202ENST00000374180 C11orf95C9JLR9 678 aaPredicted RBP22.16■■□□□ 1.14
HDHD3-202ENST00000374180 AFF2P51816 1311 aa22.16■■□□□ 1.14
HDHD3-202ENST00000374180 ZNF772Q68DY9 489 aaPredicted RBP22.15■■□□□ 1.14
HDHD3-202ENST00000374180 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
HDHD3-202ENST00000374180 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
HDHD3-202ENST00000374180 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.14
HDHD3-202ENST00000374180 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
HDHD3-202ENST00000374180 USP19O94966 1318 aa22.13■■□□□ 1.13
HDHD3-202ENST00000374180 GCP02774 474 aa22.12■■□□□ 1.13
HDHD3-202ENST00000374180 NME9Q86XW9 330 aa22.12■■□□□ 1.13
HDHD3-202ENST00000374180 MON2Q7Z3U7 1717 aa22.12■■□□□ 1.13
HDHD3-202ENST00000374180 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
HDHD3-202ENST00000374180 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
HDHD3-202ENST00000374180 USP21Q9UK80 565 aa22.11■■□□□ 1.13
HDHD3-202ENST00000374180 POTEAQ6S8J7 498 aa22.1■■□□□ 1.13
HDHD3-202ENST00000374180 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
HDHD3-202ENST00000374180 ZRANB1Q9UGI0 708 aa22.09■■□□□ 1.13
HDHD3-202ENST00000374180 NRKQ7Z2Y5 1582 aa22.09■■□□□ 1.13
HDHD3-202ENST00000374180 ABCA3Q99758 1704 aa22.09■■□□□ 1.13
HDHD3-202ENST00000374180 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.13
HDHD3-202ENST00000374180 PIK3C2AO00443 1686 aa22.08■■□□□ 1.13
HDHD3-202ENST00000374180 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.12
HDHD3-202ENST00000374180 QTRT2Q9H974 415 aaKnown RBP22.08■■□□□ 1.12
HDHD3-202ENST00000374180 MARF1Q9Y4F3 1742 aaKnown RBP22.07■■□□□ 1.12
HDHD3-202ENST00000374180 KCNH5Q8NCM2 988 aa22.07■■□□□ 1.12
HDHD3-202ENST00000374180 USP31Q70CQ4 1352 aa22.07■■□□□ 1.12
HDHD3-202ENST00000374180 KIAA0232Q92628 1395 aa22.07■■□□□ 1.12
HDHD3-202ENST00000374180 CRYBG1Q9Y4K1 1723 aa22.06■■□□□ 1.12
HDHD3-202ENST00000374180 MYOM1P52179 1685 aa22.06■■□□□ 1.12
HDHD3-202ENST00000374180 SOX12O15370 315 aa22.05■■□□□ 1.12
HDHD3-202ENST00000374180 PANK3Q9H999 370 aa22.05■■□□□ 1.12
HDHD3-202ENST00000374180 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
HDHD3-202ENST00000374180 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
HDHD3-202ENST00000374180 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
HDHD3-202ENST00000374180 SLIT2O94813 1529 aa22.04■■□□□ 1.12
HDHD3-202ENST00000374180 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 FYB1O15117 783 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 COG3Q96JB2 828 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 BTG4Q9NY30 223 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 TRPC5Q9UL62 973 aaPredicted RBP22.03■■□□□ 1.12
HDHD3-202ENST00000374180 CPDO75976 1380 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 ZBTB7CA1YPR0 619 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 ILDR2Q71H61 639 aa22.03■■□□□ 1.12
HDHD3-202ENST00000374180 SLIT3O75094 1523 aa22.02■■□□□ 1.12
HDHD3-202ENST00000374180 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
HDHD3-202ENST00000374180 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
HDHD3-202ENST00000374180 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
HDHD3-202ENST00000374180 RXRBP28702 533 aa22.01■■□□□ 1.11
HDHD3-202ENST00000374180 GGNBP2Q9H3C7 697 aa22.01■■□□□ 1.11
HDHD3-202ENST00000374180 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
HDHD3-202ENST00000374180 CGNL1Q0VF96 1302 aa21.98■■□□□ 1.11
HDHD3-202ENST00000374180 RBM6P78332 1123 aaKnown RBP21.98■■□□□ 1.11
HDHD3-202ENST00000374180 ARHGEF25Q86VW2 580 aa21.98■■□□□ 1.11
HDHD3-202ENST00000374180 OVOS2A0A0J9YW53 1432 aa21.98■■□□□ 1.11
HDHD3-202ENST00000374180 OVOS2Q6IE36 1432 aa21.98■■□□□ 1.11
HDHD3-202ENST00000374180 ATRNO75882 1429 aa21.97■■□□□ 1.11
HDHD3-202ENST00000374180 EVA1CP58658 441 aa21.96■■□□□ 1.11
HDHD3-202ENST00000374180 VPS72Q15906 364 aa21.96■■□□□ 1.11
HDHD3-202ENST00000374180 CCDC9Q9Y3X0 531 aaKnown RBP21.96■■□□□ 1.11
HDHD3-202ENST00000374180 PLCH1Q4KWH8 1693 aa21.96■■□□□ 1.11
HDHD3-202ENST00000374180 GJD4Q96KN9 370 aaPredicted RBP21.96■■□□□ 1.11
HDHD3-202ENST00000374180 AATKQ6ZMQ8 1374 aa21.95■■□□□ 1.11
HDHD3-202ENST00000374180 STRN4Q9NRL3 753 aa21.95■■□□□ 1.1
HDHD3-202ENST00000374180 KNSTRNQ9Y448 316 aa21.95■■□□□ 1.1
HDHD3-202ENST00000374180 NWD2Q9ULI1 1742 aa21.95■■□□□ 1.1
HDHD3-202ENST00000374180 USP54Q70EL1 1684 aa21.94■■□□□ 1.1
HDHD3-202ENST00000374180 NFAT5O94916 1531 aa21.93■■□□□ 1.1
HDHD3-202ENST00000374180 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.91■■□□□ 1.1
HDHD3-202ENST00000374180 FBLN1P23142 703 aa21.91■■□□□ 1.1
HDHD3-202ENST00000374180 AXIN2Q9Y2T1 843 aa21.91■■□□□ 1.1
HDHD3-202ENST00000374180 CAMTA1Q9Y6Y1 1673 aa21.91■■□□□ 1.1
HDHD3-202ENST00000374180 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.09
HDHD3-202ENST00000374180 LARP1Q6PKG0 1096 aaKnown RBP21.88■■□□□ 1.09
HDHD3-202ENST00000374180 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
HDHD3-202ENST00000374180 SPATA31A5Q5VU36 1347 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms