RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SPATA31A5Q5VU36 1347 aa22.03■■□□□ 1.12
CDKN1A-202ENST00000373711 SPATA31A7Q8IWB4 1347 aa22.03■■□□□ 1.12
CDKN1A-202ENST00000373711 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
CDKN1A-202ENST00000373711 CFAP70Q5T0N1 1121 aa22.02■■□□□ 1.12
CDKN1A-202ENST00000373711 ITSN1Q15811 1721 aa22.01■■□□□ 1.11
CDKN1A-202ENST00000373711 R3HDM1Q15032 1099 aaKnown RBP22.01■■□□□ 1.11
CDKN1A-202ENST00000373711 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
CDKN1A-202ENST00000373711 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
CDKN1A-202ENST00000373711 PRDM11Q9NQV5 511 aa21.98■■□□□ 1.11
CDKN1A-202ENST00000373711 FAM196AQ6ZSG2 479 aa21.96■■□□□ 1.11
CDKN1A-202ENST00000373711 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
CDKN1A-202ENST00000373711 NGDNQ8NEJ9 315 aaKnown RBP21.95■■□□□ 1.1
CDKN1A-202ENST00000373711 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
CDKN1A-202ENST00000373711 EZH2Q15910 746 aaKnown RBP21.94■■□□□ 1.1
CDKN1A-202ENST00000373711 ADGRB1O14514 1584 aa21.94■■□□□ 1.1
CDKN1A-202ENST00000373711 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
CDKN1A-202ENST00000373711 RREB1Q92766 1687 aa21.94■■□□□ 1.1
CDKN1A-202ENST00000373711 ATP7BP35670 1465 aa21.92■■□□□ 1.1
CDKN1A-202ENST00000373711 SPATA31A1Q5TZJ5 1347 aa21.92■■□□□ 1.1
CDKN1A-202ENST00000373711 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
CDKN1A-202ENST00000373711 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 NUP188Q5SRE5 1749 aa21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 WASLO00401 505 aaPredicted RBP21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 TRIM37O94972 964 aa21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 CAMKK2Q96RR4 588 aa21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
CDKN1A-202ENST00000373711 PRR36Q9H6K5 1346 aa21.89■■□□□ 1.1
CDKN1A-202ENST00000373711 APBA3O96018 575 aa21.89■■□□□ 1.09
CDKN1A-202ENST00000373711 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.09
CDKN1A-202ENST00000373711 NBPF14Q5TI25 921 aa21.89■■□□□ 1.09
CDKN1A-202ENST00000373711 KIAA0232Q92628 1395 aa21.88■■□□□ 1.09
CDKN1A-202ENST00000373711 DCAF8L1A6NGE4 600 aa21.87■■□□□ 1.09
CDKN1A-202ENST00000373711 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
CDKN1A-202ENST00000373711 STRN4Q9NRL3 753 aa21.87■■□□□ 1.09
CDKN1A-202ENST00000373711 YY1P25490 414 aa21.86■■□□□ 1.09
CDKN1A-202ENST00000373711 ARHGEF28Q8N1W1 1705 aaKnown RBP21.85■■□□□ 1.09
CDKN1A-202ENST00000373711 EVA1CP58658 441 aa21.84■■□□□ 1.09
CDKN1A-202ENST00000373711 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
CDKN1A-202ENST00000373711 C11orf95C9JLR9 678 aaPredicted RBP21.83■■□□□ 1.09
CDKN1A-202ENST00000373711 STAC3Q96MF2 364 aa21.83■■□□□ 1.09
CDKN1A-202ENST00000373711 PPP1R1BQ9UD71 204 aaPredicted RBP21.83■■□□□ 1.09
CDKN1A-202ENST00000373711 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
CDKN1A-202ENST00000373711 CHRNA2Q15822 529 aa21.82■■□□□ 1.08
CDKN1A-202ENST00000373711 USP35Q9P2H5 1018 aa21.81■■□□□ 1.08
CDKN1A-202ENST00000373711 RGPD3A6NKT7 1758 aaPredicted RBP21.8■■□□□ 1.08
CDKN1A-202ENST00000373711 RGPD4Q7Z3J3 1758 aa21.8■■□□□ 1.08
CDKN1A-202ENST00000373711 TOPAZ1Q8N9V7 1692 aa21.8■■□□□ 1.08
CDKN1A-202ENST00000373711 NRKQ7Z2Y5 1582 aa21.8■■□□□ 1.08
CDKN1A-202ENST00000373711 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-202ENST00000373711 NINLQ9Y2I6 1382 aa21.79■■□□□ 1.08
CDKN1A-202ENST00000373711 ZC3H6P61129 1189 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-202ENST00000373711 NUDT16Q96DE0 195 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-202ENST00000373711 SPON1Q9HCB6 807 aa21.79■■□□□ 1.08
CDKN1A-202ENST00000373711 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
CDKN1A-202ENST00000373711 THRAP3Q9Y2W1 955 aaKnown RBP21.78■■□□□ 1.08
CDKN1A-202ENST00000373711 LMO7Q8WWI1 1683 aa21.77■■□□□ 1.08
CDKN1A-202ENST00000373711 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
CDKN1A-202ENST00000373711 CPDO75976 1380 aa21.75■■□□□ 1.07
CDKN1A-202ENST00000373711 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
CDKN1A-202ENST00000373711 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
CDKN1A-202ENST00000373711 KCNQ2O43526 872 aa21.74■■□□□ 1.07
CDKN1A-202ENST00000373711 CAMTA1Q9Y6Y1 1673 aa21.74■■□□□ 1.07
CDKN1A-202ENST00000373711 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
CDKN1A-202ENST00000373711 LARP1Q6PKG0 1096 aaKnown RBP21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 ACEP12821 1306 aa21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 OVOS2A0A0G2JMS6 1433 aa21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 OVOS2A0A0J9YW53 1432 aa21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 OVOS2Q6IE36 1432 aa21.72■■□□□ 1.07
CDKN1A-202ENST00000373711 SBF2Q86WG5 1849 aa21.71■■□□□ 1.07
CDKN1A-202ENST00000373711 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
CDKN1A-202ENST00000373711 CDK19Q9BWU1 502 aa21.7■■□□□ 1.06
CDKN1A-202ENST00000373711 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
CDKN1A-202ENST00000373711 USP19O94966 1318 aa21.69■■□□□ 1.06
CDKN1A-202ENST00000373711 KIAA1210Q9ULL0 1709 aa21.69■■□□□ 1.06
CDKN1A-202ENST00000373711 CRB1P82279 1406 aa21.68■■□□□ 1.06
CDKN1A-202ENST00000373711 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
CDKN1A-202ENST00000373711 PEAK1Q9H792 1746 aa21.68■■□□□ 1.06
CDKN1A-202ENST00000373711 RAB3GAP2Q9H2M9 1393 aa21.67■■□□□ 1.06
CDKN1A-202ENST00000373711 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
CDKN1A-202ENST00000373711 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
CDKN1A-202ENST00000373711 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
CDKN1A-202ENST00000373711 BRD4O60885 1362 aaPredicted RBP21.66■■□□□ 1.06
CDKN1A-202ENST00000373711 WNK3Q9BYP7 1800 aa21.66■■□□□ 1.06
CDKN1A-202ENST00000373711 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
CDKN1A-202ENST00000373711 PLSCR1O15162 318 aa21.64■■□□□ 1.05
CDKN1A-202ENST00000373711 GCP02774 474 aa21.64■■□□□ 1.05
CDKN1A-202ENST00000373711 DDB1Q16531 1140 aa21.61■■□□□ 1.05
CDKN1A-202ENST00000373711 PPIP5K1Q6PFW1 1433 aa21.61■■□□□ 1.05
CDKN1A-202ENST00000373711 CHD4Q14839 1912 aa21.59■■□□□ 1.05
CDKN1A-202ENST00000373711 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
CDKN1A-202ENST00000373711 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
CDKN1A-202ENST00000373711 SRPK2P78362 688 aaKnown RBP21.58■■□□□ 1.05
CDKN1A-202ENST00000373711 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
CDKN1A-202ENST00000373711 MYOM1P52179 1685 aa21.57■■□□□ 1.04
CDKN1A-202ENST00000373711 QRICH2Q9H0J4 1663 aa21.57■■□□□ 1.04
CDKN1A-202ENST00000373711 SLIT3O75094 1523 aa21.57■■□□□ 1.04
CDKN1A-202ENST00000373711 ZBTB7CA1YPR0 619 aa21.57■■□□□ 1.04
CDKN1A-202ENST00000373711 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
CDKN1A-202ENST00000373711 BCL9O00512 1426 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms