RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 ALS2Q96Q42 1657 aa33.18■■■□□ 2.9
CITED4-201ENST00000372638 PLEKHG5O94827 1062 aa33.18■■■□□ 2.9
CITED4-201ENST00000372638 TESK2Q96S53 571 aa33.18■■■□□ 2.9
CITED4-201ENST00000372638 PUS7Q96PZ0 661 aaKnown RBP33.15■■■□□ 2.9
CITED4-201ENST00000372638 BRD4O60885 1362 aaPredicted RBP33.14■■■□□ 2.9
CITED4-201ENST00000372638 MARF1Q9Y4F3 1742 aaKnown RBP33.13■■■□□ 2.89
CITED4-201ENST00000372638 FNBP4Q8N3X1 1017 aaPredicted RBP33.12■■■□□ 2.89
CITED4-201ENST00000372638 ZNF692Q9BU19 519 aaPredicted RBP33.12■■■□□ 2.89
CITED4-201ENST00000372638 USP21Q9UK80 565 aa33.09■■■□□ 2.89
CITED4-201ENST00000372638 USP6P35125 1406 aa33.09■■■□□ 2.89
CITED4-201ENST00000372638 ABTB2Q8N961 1025 aa33.08■■■□□ 2.89
CITED4-201ENST00000372638 ABCA3Q99758 1704 aa33.07■■■□□ 2.88
CITED4-201ENST00000372638 TMF1P82094 1093 aa33.06■■■□□ 2.88
CITED4-201ENST00000372638 TMC1Q8TDI8 760 aa33.06■■■□□ 2.88
CITED4-201ENST00000372638 QTRT2Q9H974 415 aaKnown RBP33.06■■■□□ 2.88
CITED4-201ENST00000372638 NUTM2GQ5VZR2 741 aa33.05■■■□□ 2.88
CITED4-201ENST00000372638 RXRBP28702 533 aa33.03■■■□□ 2.88
CITED4-201ENST00000372638 CPSF1Q10570 1443 aaKnown RBP33.03■■■□□ 2.88
CITED4-201ENST00000372638 SLC12A5Q9H2X9 1139 aa33.02■■■□□ 2.88
CITED4-201ENST00000372638 NLRP13Q86W25 1043 aa33.02■■■□□ 2.88
CITED4-201ENST00000372638 AKAP12Q02952 1782 aa33.01■■■□□ 2.88
CITED4-201ENST00000372638 SSH2Q76I76 1423 aa33.01■■■□□ 2.87
CITED4-201ENST00000372638 TRPC5Q9UL62 973 aaPredicted RBP33.01■■■□□ 2.87
CITED4-201ENST00000372638 KTN1Q86UP2 1357 aaKnown RBP33■■■□□ 2.87
CITED4-201ENST00000372638 BCL9LQ86UU0 1499 aa32.99■■■□□ 2.87
CITED4-201ENST00000372638 CRYBG1Q9Y4K1 1723 aa32.99■■■□□ 2.87
CITED4-201ENST00000372638 HDGFL2Q7Z4V5 671 aaPredicted RBP32.99■■■□□ 2.87
CITED4-201ENST00000372638 TTC21BQ7Z4L5 1316 aa32.98■■■□□ 2.87
CITED4-201ENST00000372638 SLIT2O94813 1529 aa32.98■■■□□ 2.87
CITED4-201ENST00000372638 FAM83GA6ND36 823 aa32.98■■■□□ 2.87
CITED4-201ENST00000372638 RBM6P78332 1123 aaKnown RBP32.98■■■□□ 2.87
CITED4-201ENST00000372638 CDCA8Q53HL2 280 aa32.98■■■□□ 2.87
CITED4-201ENST00000372638 TERF2IPQ9NYB0 399 aa32.98■■■□□ 2.87
CITED4-201ENST00000372638 EIF4G2P78344 907 aaKnown RBP eCLIP32.97■■■□□ 2.87
CITED4-201ENST00000372638 NINLQ9Y2I6 1382 aa32.96■■■□□ 2.87
CITED4-201ENST00000372638 NLRP6P59044 892 aa32.96■■■□□ 2.87
CITED4-201ENST00000372638 UNC5CLQ8IV45 518 aa32.96■■■□□ 2.87
CITED4-201ENST00000372638 TTC21AQ8NDW8 1320 aa32.95■■■□□ 2.87
CITED4-201ENST00000372638 USP19O94966 1318 aa32.94■■■□□ 2.86
CITED4-201ENST00000372638 ATRNO75882 1429 aa32.93■■■□□ 2.86
CITED4-201ENST00000372638 CD163L1Q9NR16 1453 aa32.93■■■□□ 2.86
CITED4-201ENST00000372638 PRDM11Q9NQV5 511 aa32.92■■■□□ 2.86
CITED4-201ENST00000372638 PHRF1Q9P1Y6 1649 aaKnown RBP32.92■■■□□ 2.86
CITED4-201ENST00000372638 MON2Q7Z3U7 1717 aa32.92■■■□□ 2.86
CITED4-201ENST00000372638 ZC3H6P61129 1189 aaKnown RBP32.9■■■□□ 2.86
CITED4-201ENST00000372638 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.89■■■□□ 2.86
CITED4-201ENST00000372638 GCP02774 474 aa32.89■■■□□ 2.86
CITED4-201ENST00000372638 HSPA5P11021 654 aaKnown RBP32.89■■■□□ 2.86
CITED4-201ENST00000372638 KIAA0232Q92628 1395 aa32.89■■■□□ 2.86
CITED4-201ENST00000372638 NWD2Q9ULI1 1742 aa32.89■■■□□ 2.86
CITED4-201ENST00000372638 COL14A1Q05707 1796 aaKnown RBP32.89■■■□□ 2.86
CITED4-201ENST00000372638 PLCH1Q4KWH8 1693 aa32.88■■■□□ 2.85
CITED4-201ENST00000372638 CDK12Q9NYV4 1490 aaPredicted RBP32.88■■■□□ 2.85
CITED4-201ENST00000372638 PIK3C2AO00443 1686 aa32.87■■■□□ 2.85
CITED4-201ENST00000372638 NRKQ7Z2Y5 1582 aa32.87■■■□□ 2.85
CITED4-201ENST00000372638 A0A1W2PP64 1363 aa32.87■■■□□ 2.85
CITED4-201ENST00000372638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.87■■■□□ 2.85
CITED4-201ENST00000372638 BTG4Q9NY30 223 aa32.87■■■□□ 2.85
CITED4-201ENST00000372638 GJD4Q96KN9 370 aaPredicted RBP32.86■■■□□ 2.85
CITED4-201ENST00000372638 EDC4Q6P2E9 1401 aaKnown RBP32.85■■■□□ 2.85
CITED4-201ENST00000372638 CHRNA2Q15822 529 aa32.83■■■□□ 2.85
CITED4-201ENST00000372638 VPS72Q15906 364 aa32.83■■■□□ 2.85
CITED4-201ENST00000372638 CPDO75976 1380 aa32.82■■■□□ 2.84
CITED4-201ENST00000372638 ANKRD36BQ8N2N9 1353 aa32.81■■■□□ 2.84
CITED4-201ENST00000372638 KCNH5Q8NCM2 988 aa32.8■■■□□ 2.84
CITED4-201ENST00000372638 SLIT3O75094 1523 aa32.8■■■□□ 2.84
CITED4-201ENST00000372638 CCDC9Q9Y3X0 531 aaKnown RBP32.79■■■□□ 2.84
CITED4-201ENST00000372638 NME9Q86XW9 330 aa32.78■■■□□ 2.84
CITED4-201ENST00000372638 USP31Q70CQ4 1352 aa32.78■■■□□ 2.84
CITED4-201ENST00000372638 RGS12O14924 1447 aa32.76■■■□□ 2.83
CITED4-201ENST00000372638 NRAPQ86VF7 1730 aa32.76■■■□□ 2.83
CITED4-201ENST00000372638 ZRANB1Q9UGI0 708 aa32.76■■■□□ 2.83
CITED4-201ENST00000372638 ZBTB7CA1YPR0 619 aa32.73■■■□□ 2.83
CITED4-201ENST00000372638 POLR3GLQ9BT43 218 aa32.73■■■□□ 2.83
CITED4-201ENST00000372638 GLI3P10071 1580 aa32.72■■■□□ 2.83
CITED4-201ENST00000372638 EVA1CP58658 441 aa32.72■■■□□ 2.83
CITED4-201ENST00000372638 SOX12O15370 315 aa32.71■■■□□ 2.83
CITED4-201ENST00000372638 STRN4Q9NRL3 753 aa32.71■■■□□ 2.83
CITED4-201ENST00000372638 USP54Q70EL1 1684 aa32.69■■■□□ 2.82
CITED4-201ENST00000372638 ARHGEF25Q86VW2 580 aa32.69■■■□□ 2.82
CITED4-201ENST00000372638 AATKQ6ZMQ8 1374 aa32.68■■■□□ 2.82
CITED4-201ENST00000372638 CAMTA1Q9Y6Y1 1673 aa32.68■■■□□ 2.82
CITED4-201ENST00000372638 MYOM1P52179 1685 aa32.67■■■□□ 2.82
CITED4-201ENST00000372638 LMO7Q8WWI1 1683 aa32.67■■■□□ 2.82
CITED4-201ENST00000372638 SPATA31A5Q5VU36 1347 aa32.67■■■□□ 2.82
CITED4-201ENST00000372638 SPATA31A7Q8IWB4 1347 aa32.67■■■□□ 2.82
CITED4-201ENST00000372638 ONECUT3O60422 494 aaPredicted RBP32.66■■■□□ 2.82
CITED4-201ENST00000372638 COG3Q96JB2 828 aa32.64■■■□□ 2.82
CITED4-201ENST00000372638 OVOS2A0A0J9YW53 1432 aa32.64■■■□□ 2.82
CITED4-201ENST00000372638 OVOS2Q6IE36 1432 aa32.64■■■□□ 2.82
CITED4-201ENST00000372638 NFAT5O94916 1531 aa32.64■■■□□ 2.82
CITED4-201ENST00000372638 SEPT12Q8IYM1 358 aa32.62■■■□□ 2.81
CITED4-201ENST00000372638 CARD14Q9BXL6 1004 aa32.62■■■□□ 2.81
CITED4-201ENST00000372638 C11orf95C9JLR9 678 aaPredicted RBP32.61■■■□□ 2.81
CITED4-201ENST00000372638 FYB1O15117 783 aa32.61■■■□□ 2.81
CITED4-201ENST00000372638 SPATA31A1Q5TZJ5 1347 aa32.6■■■□□ 2.81
CITED4-201ENST00000372638 FAM98CQ17RN3 349 aaKnown RBP32.6■■■□□ 2.81
CITED4-201ENST00000372638 LARP1Q6PKG0 1096 aaKnown RBP32.6■■■□□ 2.81
CITED4-201ENST00000372638 COL18A1P39060 1754 aa32.6■■■□□ 2.81
CITED4-201ENST00000372638 COL5A2P05997 1499 aaPredicted RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms