RNA–Protein interactions for RNA: ENST00000372499.5

LRMDA-201, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRMDA, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-201ENST00000372499 VPS72Q15906 364 aa13.23□□□□□ -0.29
LRMDA-201ENST00000372499 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
LRMDA-201ENST00000372499 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
LRMDA-201ENST00000372499 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
LRMDA-201ENST00000372499 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
LRMDA-201ENST00000372499 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
LRMDA-201ENST00000372499 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
LRMDA-201ENST00000372499 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
LRMDA-201ENST00000372499 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
LRMDA-201ENST00000372499 ACEP12821 1306 aa13.2□□□□□ -0.3
LRMDA-201ENST00000372499 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
LRMDA-201ENST00000372499 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
LRMDA-201ENST00000372499 COL14A1Q05707 1796 aaKnown RBP13.19□□□□□ -0.3
LRMDA-201ENST00000372499 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
LRMDA-201ENST00000372499 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
LRMDA-201ENST00000372499 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
LRMDA-201ENST00000372499 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
LRMDA-201ENST00000372499 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
LRMDA-201ENST00000372499 CABP2Q9NPB3 220 aa13.17□□□□□ -0.3
LRMDA-201ENST00000372499 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
LRMDA-201ENST00000372499 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
LRMDA-201ENST00000372499 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
LRMDA-201ENST00000372499 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
LRMDA-201ENST00000372499 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
LRMDA-201ENST00000372499 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
LRMDA-201ENST00000372499 USP19O94966 1318 aa13.14□□□□□ -0.31
LRMDA-201ENST00000372499 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
LRMDA-201ENST00000372499 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
LRMDA-201ENST00000372499 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
LRMDA-201ENST00000372499 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
LRMDA-201ENST00000372499 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
LRMDA-201ENST00000372499 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
LRMDA-201ENST00000372499 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
LRMDA-201ENST00000372499 CABP1Q9NZU7 370 aa13.13□□□□□ -0.31
LRMDA-201ENST00000372499 USP6P35125 1406 aa13.13□□□□□ -0.31
LRMDA-201ENST00000372499 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
LRMDA-201ENST00000372499 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
LRMDA-201ENST00000372499 CPDO75976 1380 aa13.12□□□□□ -0.31
LRMDA-201ENST00000372499 CHRNA2Q15822 529 aa13.12□□□□□ -0.31
LRMDA-201ENST00000372499 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
LRMDA-201ENST00000372499 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
LRMDA-201ENST00000372499 EVC2Q86UK5 1308 aa13.12□□□□□ -0.31
LRMDA-201ENST00000372499 THSD7AQ9UPZ6 1657 aa13.12□□□□□ -0.31
LRMDA-201ENST00000372499 KCNA4P22459 653 aa13.11□□□□□ -0.31
LRMDA-201ENST00000372499 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
LRMDA-201ENST00000372499 KRT27Q7Z3Y8 459 aa13.11□□□□□ -0.31
LRMDA-201ENST00000372499 LRP5O75197 1615 aa13.1□□□□□ -0.31
LRMDA-201ENST00000372499 LMO7Q8WWI1 1683 aa13.1□□□□□ -0.31
LRMDA-201ENST00000372499 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
LRMDA-201ENST00000372499 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
LRMDA-201ENST00000372499 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
LRMDA-201ENST00000372499 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
LRMDA-201ENST00000372499 GCP02774 474 aa13.08□□□□□ -0.32
LRMDA-201ENST00000372499 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
LRMDA-201ENST00000372499 SLIT3O75094 1523 aa13.08□□□□□ -0.32
LRMDA-201ENST00000372499 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
LRMDA-201ENST00000372499 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
LRMDA-201ENST00000372499 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
LRMDA-201ENST00000372499 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
LRMDA-201ENST00000372499 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
LRMDA-201ENST00000372499 TONSLQ96HA7 1378 aa13.06□□□□□ -0.32
LRMDA-201ENST00000372499 A0A0G2JS52 829 aa13.05□□□□□ -0.32
LRMDA-201ENST00000372499 MYT1Q01538 1121 aa13.05□□□□□ -0.32
LRMDA-201ENST00000372499 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
LRMDA-201ENST00000372499 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
LRMDA-201ENST00000372499 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
LRMDA-201ENST00000372499 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
LRMDA-201ENST00000372499 STRN4Q9NRL3 753 aa13.05□□□□□ -0.32
LRMDA-201ENST00000372499 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
LRMDA-201ENST00000372499 NLRP6P59044 892 aa13.04□□□□□ -0.32
LRMDA-201ENST00000372499 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
LRMDA-201ENST00000372499 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
LRMDA-201ENST00000372499 CD163L1Q9NR16 1453 aa13.04□□□□□ -0.32
LRMDA-201ENST00000372499 COL18A1P39060 1754 aa13.03□□□□□ -0.32
LRMDA-201ENST00000372499 FAM182BQ5T319 152 aa13.03□□□□□ -0.32
LRMDA-201ENST00000372499 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
LRMDA-201ENST00000372499 EVA1CP58658 441 aa13.02□□□□□ -0.33
LRMDA-201ENST00000372499 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
LRMDA-201ENST00000372499 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.33
LRMDA-201ENST00000372499 TTC21AQ8NDW8 1320 aa13.02□□□□□ -0.33
LRMDA-201ENST00000372499 USP35Q9P2H5 1018 aa13.01□□□□□ -0.33
LRMDA-201ENST00000372499 DISP2A7MBM2 1401 aa13.01□□□□□ -0.33
LRMDA-201ENST00000372499 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
LRMDA-201ENST00000372499 NFAT5O94916 1531 aa13□□□□□ -0.33
LRMDA-201ENST00000372499 KTN1Q86UP2 1357 aaKnown RBP13□□□□□ -0.33
LRMDA-201ENST00000372499 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
LRMDA-201ENST00000372499 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
LRMDA-201ENST00000372499 TESK2Q96S53 571 aa13□□□□□ -0.33
LRMDA-201ENST00000372499 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
LRMDA-201ENST00000372499 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
LRMDA-201ENST00000372499 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
LRMDA-201ENST00000372499 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
LRMDA-201ENST00000372499 CRB1P82279 1406 aa12.99□□□□□ -0.33
LRMDA-201ENST00000372499 BAG6P46379 1132 aa12.99□□□□□ -0.33
LRMDA-201ENST00000372499 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
LRMDA-201ENST00000372499 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
LRMDA-201ENST00000372499 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
LRMDA-201ENST00000372499 KCNH5Q8NCM2 988 aa12.98□□□□□ -0.33
LRMDA-201ENST00000372499 PARP4Q9UKK3 1724 aaKnown RBP12.98□□□□□ -0.33
LRMDA-201ENST00000372499 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms