RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 G3V3G9 751 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 DCAF8Q5TAQ9 597 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 ACBD3Q9H3P7 528 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 GNAI2P04899 355 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 MARCH6O60337 910 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 BRMS1Q9HCU9 246 aa14.48□□□□□ -0.09
CDC42BPA-203ENST00000366766 SETQ01105 290 aaPredicted RBP14.47□□□□□ -0.09
CDC42BPA-203ENST00000366766 FCHSD2O94868 740 aa14.47□□□□□ -0.09
CDC42BPA-203ENST00000366766 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
CDC42BPA-203ENST00000366766 EVA1CP58658 441 aa14.46□□□□□ -0.09
CDC42BPA-203ENST00000366766 CCDC173Q0VFZ6 552 aa14.46□□□□□ -0.1
CDC42BPA-203ENST00000366766 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.1
CDC42BPA-203ENST00000366766 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 EIF2S2P20042 333 aaKnown RBP14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 NUP160Q12769 1436 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 UGGT2Q9NYU1 1516 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 AEBP1Q8IUX7 1158 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 CFAP70Q5T0N1 1121 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 ABCC5O15440 1437 aa14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 PIP4K2AP48426 406 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPA-203ENST00000366766 PLEKHO1Q53GL0 409 aaPredicted RBP14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 VPS37CA5D8V6 355 aaPredicted RBP14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 TWISTNBQ3B726 338 aaPredicted RBP14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 VPS37DQ86XT2 251 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 TRAK2O60296 914 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
CDC42BPA-203ENST00000366766 KINO60870 393 aaKnown RBP14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 FAM69CQ0P6D2 419 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 NUTM2FA1L443 756 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 HMGB2P26583 209 aaKnown RBP14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 ZNF396Q96N95 335 aaPredicted RBP14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 PLEKHH1Q9ULM0 1364 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 SLC4A3P48751 1232 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 GGNBP2Q9H3C7 697 aa14.43□□□□□ -0.1
CDC42BPA-203ENST00000366766 FOXD4L5Q5VV16 416 aaPredicted RBP14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 OLFM4Q6UX06 510 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 FOXD4L4Q8WXT5 416 aaPredicted RBP14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 RTEL1-TNFRSF6BF6WH68 1400 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 ATF3P18847 181 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 APPP05067 770 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 HMOX1P09601 288 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
CDC42BPA-203ENST00000366766 PES1O00541 588 aaKnown RBP14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 CDR1P51861 262 aa14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 DUOX2Q9NRD8 1548 aa14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
CDC42BPA-203ENST00000366766 THEMISQ8N1K5 641 aaPredicted RBP14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 TBC1D2BQ9UPU7 963 aa14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 NFXL1Q6ZNB6 911 aa14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 NLRP6P59044 892 aa14.4□□□□□ -0.1
CDC42BPA-203ENST00000366766 LRRCC1Q9C099 1032 aa14.4□□□□□ -0.11
CDC42BPA-203ENST00000366766 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.11
CDC42BPA-203ENST00000366766 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
CDC42BPA-203ENST00000366766 NBPF1Q3BBV0 1214 aa14.39□□□□□ -0.11
CDC42BPA-203ENST00000366766 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPA-203ENST00000366766 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPA-203ENST00000366766 KRT32Q14532 448 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 SLC3A2P08195 630 aaKnown RBP14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 TSPY26PQ9H489 355 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 TRIM34Q9BYJ4 488 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 CFAP65Q6ZU64 1925 aaKnown RBP14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 SLFN5Q08AF3 891 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 CCDC192P0DO97 292 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 SDF4Q9BRK5 362 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 NEK4P51957 841 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 CDCA7LQ96GN5 454 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
CDC42BPA-203ENST00000366766 SHANK2Q9UPX8 1470 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■■□□ 17.5
CDC42BPA-203ENST00000366766 TCEAL9Q9UHQ7 104 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 HSP90B2PQ58FF3 399 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 IFT57Q9NWB7 429 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 NOB1Q9ULX3 412 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 ERCC4Q92889 916 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 LRPPRCP42704 1394 aaKnown RBP14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 AK7Q96M32 723 aa14.37□□□□□ -0.11
CDC42BPA-203ENST00000366766 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms