RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 LRRCC1Q9C099 1032 aa19.89■□□□□ 0.77
NID1-202ENST00000366595 SLC3A2P08195 630 aaKnown RBP19.89■□□□□ 0.77
NID1-202ENST00000366595 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
NID1-202ENST00000366595 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
NID1-202ENST00000366595 UQCRHLA0A096LP55 91 aa19.88■□□□□ 0.77
NID1-202ENST00000366595 UQCRHP07919 91 aa19.88■□□□□ 0.77
NID1-202ENST00000366595 GBP2P32456 591 aaPredicted RBP19.87■□□□□ 0.77
NID1-202ENST00000366595 NEK4P51957 841 aa19.87■□□□□ 0.77
NID1-202ENST00000366595 RBM33Q96EV2 1170 aaKnown RBP19.87■□□□□ 0.77
NID1-202ENST00000366595 EVA1CP58658 441 aa19.87■□□□□ 0.77
NID1-202ENST00000366595 NEUROD6Q96NK8 337 aa19.87■□□□□ 0.77
NID1-202ENST00000366595 BCL11BQ9C0K0 894 aaPredicted RBP19.87■□□□□ 0.77
NID1-202ENST00000366595 KRT18P05783 430 aaKnown RBP19.87■□□□□ 0.77
NID1-202ENST00000366595 BRPF1P55201 1214 aaPredicted RBP19.87■□□□□ 0.77
NID1-202ENST00000366595 SOGA1O94964 1423 aa19.87■□□□□ 0.77
NID1-202ENST00000366595 SLC26A8Q96RN1 970 aa19.86■□□□□ 0.77
NID1-202ENST00000366595 TNMDQ9H2S6 317 aa19.86■□□□□ 0.77
NID1-202ENST00000366595 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
NID1-202ENST00000366595 TSPYL4Q9UJ04 414 aa19.86■□□□□ 0.77
NID1-202ENST00000366595 TAX1BP1Q86VP1 789 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 PDCL3Q9H2J4 239 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 ERC1Q8IUD2 1116 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 GRPEL1Q9HAV7 217 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 FIBPO43427 364 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 FAM107BQ9H098 131 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 KRT85P78386 507 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 SPC24Q8NBT2 197 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 SHTN1A0MZ66 631 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 GCC1Q96CN9 775 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 BRPF3Q9ULD4 1205 aa19.85■□□□□ 0.77
NID1-202ENST00000366595 CIZ1Q9ULV3 898 aaPredicted RBP19.85■□□□□ 0.77
NID1-202ENST00000366595 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.84■□□□□ 0.77
NID1-202ENST00000366595 CCDC91Q7Z6B0 441 aa19.83■□□□□ 0.77
NID1-202ENST00000366595 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.76
NID1-202ENST00000366595 CEP57L1Q8IYX8 460 aa19.83■□□□□ 0.76
NID1-202ENST00000366595 CCDC102AQ96A19 550 aa19.82■□□□□ 0.76
NID1-202ENST00000366595 WASHC2AQ641Q2 1341 aa19.82■□□□□ 0.76
NID1-202ENST00000366595 UBXN4Q92575 508 aa19.82■□□□□ 0.76
NID1-202ENST00000366595 DESP17661 470 aa19.82■□□□□ 0.76
NID1-202ENST00000366595 MCM3P25205 808 aa19.82■□□□□ 0.76
NID1-202ENST00000366595 TMEM132AQ24JP5 1023 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 TRIM22Q8IYM9 498 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
NID1-202ENST00000366595 SMTNL1A8MU46 457 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 ESPNB1AK53 854 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 CENPHQ9H3R5 247 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 TMCO3Q6UWJ1 677 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 TAF4BQ92750 862 aa19.81■□□□□ 0.76
NID1-202ENST00000366595 CRACR2AQ9BSW2 395 aa19.8■□□□□ 0.76
NID1-202ENST00000366595 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
NID1-202ENST00000366595 MAP9Q49MG5 647 aa19.8■□□□□ 0.76
NID1-202ENST00000366595 CCDC148Q8NFR7 591 aa19.8■□□□□ 0.76
NID1-202ENST00000366595 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
NID1-202ENST00000366595 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.762e-7■■■■□ 25.4
NID1-202ENST00000366595 CALCOCO1Q9P1Z2 691 aa19.78■□□□□ 0.76
NID1-202ENST00000366595 NOL7Q9UMY1 257 aaKnown RBP19.78■□□□□ 0.76
NID1-202ENST00000366595 MSH5O43196 834 aa19.78■□□□□ 0.76
NID1-202ENST00000366595 ATP2B1P20020 1258 aa19.78■□□□□ 0.76
NID1-202ENST00000366595 IKQ13123 557 aaPredicted RBP19.78■□□□□ 0.76
NID1-202ENST00000366595 NECTIN2Q92692 538 aa19.78■□□□□ 0.76
NID1-202ENST00000366595 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
NID1-202ENST00000366595 MICALCLQ6ZW33 695 aa19.77■□□□□ 0.76
NID1-202ENST00000366595 CFAP45Q9UL16 551 aa19.77■□□□□ 0.76
NID1-202ENST00000366595 ME1P48163 572 aa19.77■□□□□ 0.76
NID1-202ENST00000366595 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
NID1-202ENST00000366595 K7ELQ4 463 aaPredicted RBP19.77■□□□□ 0.76
NID1-202ENST00000366595 LRRFIP2Q9Y608 721 aaKnown RBP19.77■□□□□ 0.75
NID1-202ENST00000366595 PANK1Q8TE04 598 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 DDX11Q96FC9 970 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 EPB41L2O43491 1005 aaKnown RBP19.76■□□□□ 0.75
NID1-202ENST00000366595 CETN2P41208 172 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 PDE3AQ14432 1141 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 ZSCAN30Q86W11 494 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 ZSCAN31Q96LW9 406 aaPredicted RBP19.76■□□□□ 0.75
NID1-202ENST00000366595 TANGO6Q9C0B7 1094 aa19.76■□□□□ 0.75
NID1-202ENST00000366595 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
NID1-202ENST00000366595 BMP2KQ9NSY1 1161 aaPredicted RBP19.75■□□□□ 0.75
NID1-202ENST00000366595 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
NID1-202ENST00000366595 CDKL5O76039 1030 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 FAM193AP78312 1265 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 CCDC57Q2TAC2 916 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 CCDC30Q5VVM6 783 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 MAP2K1Q02750 393 aaPredicted RBP19.75■□□□□ 0.75
NID1-202ENST00000366595 ARHGAP29Q52LW3 1261 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 GOLGA6L10A0A0M3HER8 536 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 STAMBPO95630 424 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
NID1-202ENST00000366595 FYB1O15117 783 aa19.74■□□□□ 0.75
NID1-202ENST00000366595 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.74■□□□□ 0.75
NID1-202ENST00000366595 IMMTQ16891 758 aaKnown RBP19.74■□□□□ 0.75
NID1-202ENST00000366595 ZSCAN12O43309 604 aa19.74■□□□□ 0.75
NID1-202ENST00000366595 RAPGEF4Q8WZA2 1011 aa19.74■□□□□ 0.75
NID1-202ENST00000366595 NUP62CLQ9H1M0 184 aa19.74■□□□□ 0.75
NID1-202ENST00000366595 UPF3BQ9BZI7 483 aaKnown RBP19.73■□□□□ 0.75
NID1-202ENST00000366595 FILIP1Q7Z7B0 1213 aa19.73■□□□□ 0.75
NID1-202ENST00000366595 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
NID1-202ENST00000366595 NACAP1Q9BZK3 213 aa19.72■□□□□ 0.75
NID1-202ENST00000366595 SAMD1Q6SPF0 538 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms