RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MSH5O43196 834 aa16.3■□□□□ 0.2
CSNK1E-202ENST00000366216 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
CSNK1E-202ENST00000366216 BTG4Q9NY30 223 aa16.28■□□□□ 0.2
CSNK1E-202ENST00000366216 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
CSNK1E-202ENST00000366216 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
CSNK1E-202ENST00000366216 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
CSNK1E-202ENST00000366216 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
CSNK1E-202ENST00000366216 SPATA31A5Q5VU36 1347 aa16.25■□□□□ 0.19
CSNK1E-202ENST00000366216 SPATA31A7Q8IWB4 1347 aa16.25■□□□□ 0.19
CSNK1E-202ENST00000366216 YTHDC2Q9H6S0 1430 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-202ENST00000366216 RGL3Q3MIN7 710 aa16.24■□□□□ 0.19
CSNK1E-202ENST00000366216 PIK3C2GO75747 1445 aa16.24■□□□□ 0.19
CSNK1E-202ENST00000366216 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
CSNK1E-202ENST00000366216 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
CSNK1E-202ENST00000366216 TRIM37O94972 964 aa16.23■□□□□ 0.19
CSNK1E-202ENST00000366216 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
CSNK1E-202ENST00000366216 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-202ENST00000366216 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
CSNK1E-202ENST00000366216 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
CSNK1E-202ENST00000366216 PHRF1Q9P1Y6 1649 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-202ENST00000366216 APBA3O96018 575 aa16.21■□□□□ 0.19
CSNK1E-202ENST00000366216 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.19
CSNK1E-202ENST00000366216 PPP1R1BQ9UD71 204 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-202ENST00000366216 CASZ1Q86V15 1759 aa16.21■□□□□ 0.18
CSNK1E-202ENST00000366216 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
CSNK1E-202ENST00000366216 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
CSNK1E-202ENST00000366216 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
CSNK1E-202ENST00000366216 SPON1Q9HCB6 807 aa16.19■□□□□ 0.18
CSNK1E-202ENST00000366216 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
CSNK1E-202ENST00000366216 SAFB2Q14151 953 aaKnown RBP eCLIP16.18■□□□□ 0.18
CSNK1E-202ENST00000366216 NBPF8Q3BBV2 869 aa16.17■□□□□ 0.18
CSNK1E-202ENST00000366216 NBPF14Q5TI25 921 aa16.17■□□□□ 0.18
CSNK1E-202ENST00000366216 ANKARQ7Z5J8 1434 aa16.17■□□□□ 0.18
CSNK1E-202ENST00000366216 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
CSNK1E-202ENST00000366216 MYOM1P52179 1685 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 SPATA31A1Q5TZJ5 1347 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 UTRNP46939 3433 aa16.16■□□□□ 0.18
CSNK1E-202ENST00000366216 KCNQ2O43526 872 aa16.15■□□□□ 0.18
CSNK1E-202ENST00000366216 PRAM1Q96QH2 718 aa16.15■□□□□ 0.18
CSNK1E-202ENST00000366216 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
CSNK1E-202ENST00000366216 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
CSNK1E-202ENST00000366216 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-202ENST00000366216 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
CSNK1E-202ENST00000366216 DLC1Q96QB1 1528 aa16.11■□□□□ 0.17
CSNK1E-202ENST00000366216 AKAP12Q02952 1782 aa16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 SENP3-EIF4A1A0A087X0R7 540 aa16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 NPM3O75607 178 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
CSNK1E-202ENST00000366216 TULP4Q9NRJ4 1543 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 ADGRB1O14514 1584 aa16.09■□□□□ 0.17
CSNK1E-202ENST00000366216 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.17
CSNK1E-202ENST00000366216 BARGINQ6ZT62 677 aa16.07■□□□□ 0.16
CSNK1E-202ENST00000366216 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
CSNK1E-202ENST00000366216 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
CSNK1E-202ENST00000366216 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
CSNK1E-202ENST00000366216 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
CSNK1E-202ENST00000366216 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-202ENST00000366216 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
CSNK1E-202ENST00000366216 POGKQ9P215 609 aa16.05■□□□□ 0.16
CSNK1E-202ENST00000366216 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
CSNK1E-202ENST00000366216 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-202ENST00000366216 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
CSNK1E-202ENST00000366216 ATP7BP35670 1465 aa16.03■□□□□ 0.16
CSNK1E-202ENST00000366216 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
CSNK1E-202ENST00000366216 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
CSNK1E-202ENST00000366216 EVA1CP58658 441 aa16.02■□□□□ 0.16
CSNK1E-202ENST00000366216 ZC3H6P61129 1189 aaKnown RBP16.02■□□□□ 0.16
CSNK1E-202ENST00000366216 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
CSNK1E-202ENST00000366216 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.16
CSNK1E-202ENST00000366216 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.15
CSNK1E-202ENST00000366216 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
CSNK1E-202ENST00000366216 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
CSNK1E-202ENST00000366216 TCP11L2Q8N4U5 519 aa16.01■□□□□ 0.15
CSNK1E-202ENST00000366216 TONSLQ96HA7 1378 aa16■□□□□ 0.15
CSNK1E-202ENST00000366216 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
CSNK1E-202ENST00000366216 WASLO00401 505 aaPredicted RBP16■□□□□ 0.15
CSNK1E-202ENST00000366216 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
CSNK1E-202ENST00000366216 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
CSNK1E-202ENST00000366216 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
CSNK1E-202ENST00000366216 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
CSNK1E-202ENST00000366216 PLSCR1O15162 318 aa15.99■□□□□ 0.15
CSNK1E-202ENST00000366216 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
CSNK1E-202ENST00000366216 RGPD5Q99666 1765 aa15.98■□□□□ 0.15
CSNK1E-202ENST00000366216 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
CSNK1E-202ENST00000366216 ZBTB7AO95365 584 aa15.98■□□□□ 0.15
CSNK1E-202ENST00000366216 PTGER2P43116 358 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms