RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 PCDHGC3Q9UN70 934 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 TLL2Q9Y6L7 1015 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 VEGFBP49765 207 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 SH3BP2P78314 561 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 SCARF1Q14162 830 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 ZNF511Q8NB15 262 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 BAP1Q92560 729 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 IRF7Q92985 503 aa4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NXF1Q9UBU9 619 aaKnown RBP4.77□□□□□ -1.65
RNU6-1048P-201ENST00000364054 SPTLC1O15269 473 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 SIAH2O43255 324 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NDUFV2P19404 249 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 ARID5BQ14865 1188 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 AGERQ15109 404 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 RSBN1LQ6PCB5 846 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 LYPD8Q6UX82 237 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 RSPH6AQ9H0K4 717 aa4.76□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NUTM2BA6NNL0 878 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NUTM2EB1AL46 878 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 TRIM66O15016 1216 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 UPP2O95045 317 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 GMPRP36959 345 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NNTQ13423 1086 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 TUSC1Q2TAM9 212 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NUTM2DQ5VT03 806 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 TRIM46Q7Z4K8 759 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 RIC3Q7Z5B4 369 aa4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 BPHLQ86WA6 291 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NUTM2AQ8IVF1 878 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 HELBQ8NG08 1087 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1048P-201ENST00000364054 ADH1CP00326 375 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 WDR4P57081 412 aaKnown RBP4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NR5A1Q13285 461 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 NBPF14Q5TI25 921 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 PARP9Q8IXQ6 854 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 TSC1Q92574 1164 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 TRIM52Q96A61 297 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 ZFP42Q96MM3 310 aa4.74□□□□□ -1.65
RNU6-1048P-201ENST00000364054 HRCP23327 699 aa4.73□□□□□ -1.65
RNU6-1048P-201ENST00000364054 MRPL14Q6P1L8 145 aaKnown RBP4.73□□□□□ -1.65
RNU6-1048P-201ENST00000364054 ZSCAN1Q8NBB4 408 aa4.73□□□□□ -1.65
RNU6-1048P-201ENST00000364054 GPKOWQ92917 476 aaPredicted RBP eCLIP4.73□□□□□ -1.65
RNU6-1048P-201ENST00000364054 PURBQ96QR8 312 aaKnown RBP4.73□□□□□ -1.65
RNU6-1048P-201ENST00000364054 MAN1A2O60476 641 aa4.72□□□□□ -1.65
RNU6-1048P-201ENST00000364054 CSPP1Q1MSJ5 1256 aa4.72□□□□□ -1.65
RNU6-1048P-201ENST00000364054 PNMA1Q8ND90 353 aa4.72□□□□□ -1.65
RNU6-1048P-201ENST00000364054 CDK15Q96Q40 435 aa4.72□□□□□ -1.65
RNU6-1048P-201ENST00000364054 H3BM21 787 aa4.71□□□□□ -1.66
RNU6-1048P-201ENST00000364054 C6orf118Q5T5N4 469 aa4.71□□□□□ -1.66
RNU6-1048P-201ENST00000364054 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
RNU6-1048P-201ENST00000364054 CFAP99D6REC4 459 aa4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ZIC2O95409 532 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 F12P00748 615 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 BMP2P12643 396 aa4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 TIMP2P16035 220 aa4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 PDE4DQ08499 809 aa4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 CDV3Q9UKY7 258 aaKnown RBP4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 PCDHB15Q9Y5E8 787 aa4.7□□□□□ -1.66
RNU6-1048P-201ENST00000364054 SOBPA7XYQ1 873 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 CLK2P49760 499 aaKnown RBP4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 MYSM1Q5VVJ2 828 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 FOXJ1Q92949 421 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 MAP10Q9P2G4 905 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 MAP4K5Q9Y4K4 846 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ERBB4Q15303 1308 aa4.69□□□□□ -1.66
RNU6-1048P-201ENST00000364054 LILRB3O75022 631 aa4.68□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ZFAND3Q9H8U3 227 aa4.68□□□□□ -1.66
RNU6-1048P-201ENST00000364054 EMILIN1Q9Y6C2 1016 aa4.68□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ZC3H4Q9UPT8 1303 aaKnown RBP4.68□□□□□ -1.66
RNU6-1048P-201ENST00000364054 FSHRP23945 695 aa4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 DHX9Q08211 1270 aaKnown RBP4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 VASH1Q7L8A9 365 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 TRMT44Q8IYL2 757 aaKnown RBP4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 CABLES1Q8TDN4 633 aa4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ITPKCQ96DU7 683 aa4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 TSEN34Q9BSV6 310 aaKnown RBP4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 PGPEP1Q9NXJ5 209 aa4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 ATP1B4Q9UN42 357 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1048P-201ENST00000364054 MAGEB6P1A0A0J9YX57 407 aa4.66□□□□□ -1.66
RNU6-1048P-201ENST00000364054 DDRGK1Q96HY6 314 aa4.66□□□□□ -1.66
RNU6-1048P-201ENST00000364054 CARD14Q9BXL6 1004 aa4.66□□□□□ -1.66
RNU6-1048P-201ENST00000364054 PDXDC2PQ6P474 469 aa4.65□□□□□ -1.67
RNU6-1048P-201ENST00000364054 CCDC116Q8IYX3 515 aa4.65□□□□□ -1.67
RNU6-1048P-201ENST00000364054 LINC00528Q8N1L1 170 aa4.65□□□□□ -1.67
RNU6-1048P-201ENST00000364054 C1QTNF2Q9BXJ5 285 aa4.65□□□□□ -1.67
RNU6-1048P-201ENST00000364054 LIMD1Q9UGP4 676 aa4.65□□□□□ -1.67
RNU6-1048P-201ENST00000364054 PER1O15534 1290 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 NR3C2P08235 984 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 PTK2Q05397 1052 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 QPCTQ16769 361 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SH3RF1Q7Z6J0 888 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 ZBTB33Q86T24 672 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SLC10A4Q96EP9 437 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 ARHGAP9Q9BRR9 750 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 KLF16Q9BXK1 252 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 SLC24A3Q9HC58 644 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 GPSM3Q9Y4H4 160 aa4.64□□□□□ -1.67
RNU6-1048P-201ENST00000364054 VSIG8P0DPA2 414 aa4.63□□□□□ -1.67
RNU6-1048P-201ENST00000364054 GRM5P41594 1212 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms