RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 STK3Q13188 491 aa17.97■□□□□ 0.47
APAF1-203ENST00000359972 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
APAF1-203ENST00000359972 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
APAF1-203ENST00000359972 STK38Q15208 465 aa17.97■□□□□ 0.47
APAF1-203ENST00000359972 ROCK1Q13464 1354 aa17.97■□□□□ 0.47
APAF1-203ENST00000359972 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
APAF1-203ENST00000359972 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
APAF1-203ENST00000359972 MNAT1P51948 309 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 PTPN14Q15678 1187 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
APAF1-203ENST00000359972 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 RIPK4P57078 832 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
APAF1-203ENST00000359972 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
APAF1-203ENST00000359972 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
APAF1-203ENST00000359972 ERC2O15083 957 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
APAF1-203ENST00000359972 CWC22Q9HCG8 908 aaKnown RBP17.96■□□□□ 0.46
APAF1-203ENST00000359972 BRMS1Q9HCU9 246 aa17.96■□□□□ 0.46
APAF1-203ENST00000359972 GTF2E1P29083 439 aaPredicted RBP17.95■□□□□ 0.46
APAF1-203ENST00000359972 CASQ1P31415 396 aa17.95■□□□□ 0.46
APAF1-203ENST00000359972 GGT6Q6P531 493 aa17.95■□□□□ 0.46
APAF1-203ENST00000359972 ANKRD18AQ8IVF6 992 aa17.95■□□□□ 0.46
APAF1-203ENST00000359972 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
APAF1-203ENST00000359972 LMAN1P49257 510 aa17.95■□□□□ 0.46
APAF1-203ENST00000359972 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 CCDC113Q9H0I3 377 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 CAMK4Q16566 473 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 SOGA1O94964 1423 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 CBFA2T2O43439 604 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 SLC26A8Q96RN1 970 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 FYB1O15117 783 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
APAF1-203ENST00000359972 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
APAF1-203ENST00000359972 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
APAF1-203ENST00000359972 CDCA7LQ96GN5 454 aa17.93■□□□□ 0.46
APAF1-203ENST00000359972 ME1P48163 572 aa17.93■□□□□ 0.46
APAF1-203ENST00000359972 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
APAF1-203ENST00000359972 CNTROBQ8N137 903 aa17.93■□□□□ 0.46
APAF1-203ENST00000359972 EZRP15311 586 aaKnown RBP17.92■□□□□ 0.46
APAF1-203ENST00000359972 SYCP1Q15431 976 aa17.92■□□□□ 0.46
APAF1-203ENST00000359972 C1orf115Q9H7X2 142 aa17.92■□□□□ 0.46
APAF1-203ENST00000359972 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
APAF1-203ENST00000359972 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
APAF1-203ENST00000359972 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
APAF1-203ENST00000359972 GBP2P32456 591 aaPredicted RBP17.92■□□□□ 0.46
APAF1-203ENST00000359972 DHX8Q14562 1220 aaKnown RBP17.92■□□□□ 0.46
APAF1-203ENST00000359972 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
APAF1-203ENST00000359972 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
APAF1-203ENST00000359972 CCDC148Q8NFR7 591 aa17.91■□□□□ 0.46
APAF1-203ENST00000359972 MCM2P49736 904 aa17.91■□□□□ 0.46
APAF1-203ENST00000359972 C16orf45Q96MC5 204 aaPredicted RBP17.91■□□□□ 0.46
APAF1-203ENST00000359972 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
APAF1-203ENST00000359972 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
APAF1-203ENST00000359972 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
APAF1-203ENST00000359972 KIAA1328Q86T90 577 aa17.9■□□□□ 0.46
APAF1-203ENST00000359972 CTDP1Q9Y5B0 961 aaPredicted RBP17.9■□□□□ 0.46
APAF1-203ENST00000359972 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
APAF1-203ENST00000359972 MICALCLQ6ZW33 695 aa17.9■□□□□ 0.46
APAF1-203ENST00000359972 NEUROD6Q96NK8 337 aa17.89■□□□□ 0.46
APAF1-203ENST00000359972 KIF18AQ8NI77 898 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 CEP63Q96MT8 703 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 USP47Q96K76 1375 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 XBP1P17861 261 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
APAF1-203ENST00000359972 GBP3Q9H0R5 595 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 PDCP20941 246 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
APAF1-203ENST00000359972 FAM107BQ9H098 131 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
APAF1-203ENST00000359972 DACH1Q9UI36 760 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 CLGNO14967 610 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 SPATA32Q96LK8 384 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 ARHGAP29Q52LW3 1261 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 JAKMIP3Q5VZ66 844 aa17.88■□□□□ 0.45
APAF1-203ENST00000359972 KRT85P78386 507 aa17.87■□□□□ 0.45
APAF1-203ENST00000359972 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
APAF1-203ENST00000359972 DYNC1I1O14576 645 aa17.87■□□□□ 0.45
APAF1-203ENST00000359972 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
APAF1-203ENST00000359972 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
APAF1-203ENST00000359972 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
APAF1-203ENST00000359972 SEPT11Q9NVA2 429 aaKnown RBP17.86■□□□□ 0.45
APAF1-203ENST00000359972 NBPF1Q3BBV0 1214 aa17.86■□□□□ 0.45
APAF1-203ENST00000359972 RAI14Q9P0K7 980 aa17.86■□□□□ 0.45
APAF1-203ENST00000359972 NGDNQ8NEJ9 315 aaKnown RBP17.86■□□□□ 0.45
APAF1-203ENST00000359972 ATP2C2O75185 946 aa17.86■□□□□ 0.45
APAF1-203ENST00000359972 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
APAF1-203ENST00000359972 VPS37DQ86XT2 251 aa17.85■□□□□ 0.45
APAF1-203ENST00000359972 LUC7LQ9NQ29 371 aaKnown RBP17.85■□□□□ 0.45
APAF1-203ENST00000359972 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
APAF1-203ENST00000359972 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
APAF1-203ENST00000359972 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
APAF1-203ENST00000359972 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
APAF1-203ENST00000359972 TXLNAP40222 546 aa17.84■□□□□ 0.45
APAF1-203ENST00000359972 CFAP100Q494V2 611 aa17.84■□□□□ 0.45
APAF1-203ENST00000359972 GOPCQ9HD26 462 aa17.84■□□□□ 0.45
APAF1-203ENST00000359972 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
APAF1-203ENST00000359972 IGSF3O75054 1194 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms