RNA–Protein interactions for RNA: ENST00000355540.7

TRRAP-201, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRRAP, Length 12,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-201ENST00000355540 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
TRRAP-201ENST00000355540 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
TRRAP-201ENST00000355540 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
TRRAP-201ENST00000355540 FILIP1LQ4L180 1135 aa8.68□□□□□ -1.02
TRRAP-201ENST00000355540 CCDC146Q8IYE0 955 aa8.68□□□□□ -1.02
TRRAP-201ENST00000355540 CASKIN1Q8WXD9 1431 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 TUBB4AP04350 444 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 RUSC2Q8N2Y8 1516 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 CCAR1Q8IX12 1150 aaKnown RBP8.67□□□□□ -1.02
TRRAP-201ENST00000355540 TAOK3Q9H2K8 898 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 CEP128Q6ZU80 1094 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 NDC80O14777 642 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 CEP112Q8N8E3 955 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 GNL3LQ9NVN8 582 aaKnown RBP8.67□□□□□ -1.02
TRRAP-201ENST00000355540 CCDC73Q6ZRK6 1079 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 AKNAQ7Z591 1439 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
TRRAP-201ENST00000355540 KIF14Q15058 1648 aa8.67□□□□□ -1.02
TRRAP-201ENST00000355540 FGFR1OPO95684 399 aaKnown RBP8.66□□□□□ -1.02
TRRAP-201ENST00000355540 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
TRRAP-201ENST00000355540 IMMTQ16891 758 aaKnown RBP8.66□□□□□ -1.02
TRRAP-201ENST00000355540 MICALCLQ6ZW33 695 aa8.66□□□□□ -1.02
TRRAP-201ENST00000355540 GABPB2Q8TAK5 448 aaPredicted RBP8.66□□□□□ -1.02
TRRAP-201ENST00000355540 USP37Q86T82 979 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 RNF214Q8ND24 703 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 IGF1RP08069 1367 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 CBFA2T2O43439 604 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.02
TRRAP-201ENST00000355540 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
TRRAP-201ENST00000355540 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.03
TRRAP-201ENST00000355540 VPS37DQ86XT2 251 aa8.65□□□□□ -1.03
TRRAP-201ENST00000355540 JAKMIP3Q5VZ66 844 aa8.65□□□□□ -1.03
TRRAP-201ENST00000355540 FRAT1Q92837 279 aaPredicted RBP8.65□□□□□ -1.03
TRRAP-201ENST00000355540 BBXQ8WY36 941 aaPredicted RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 HSP90AB2PQ58FF8 381 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 FILIP1Q7Z7B0 1213 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 RALYLQ86SE5 291 aaKnown RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 GOLGA6L9A6NEM1 432 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 RAB34Q9BZG1 259 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 VGFO15240 615 aaPredicted RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 VPS53Q5VIR6 699 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 TUBBP07437 444 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 WASF1Q92558 559 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 GCOM1H8Y6P7 765 aaPredicted RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 MYZAPP0CAP1 466 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC14Q49A88 953 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 MYH10P35580 1976 aa8.64□□□□□ -1.03
TRRAP-201ENST00000355540 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
TRRAP-201ENST00000355540 POGZQ7Z3K3 1410 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 OPA1O60313 960 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 SASS6Q6UVJ0 657 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 GOLGA1Q92805 767 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 MAGEC2Q9UBF1 373 aaPredicted RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC172P0C7W6 258 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC94Q9BW85 323 aaPredicted RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 TNIP1Q15025 636 aa8.63□□□□□ -1.03
TRRAP-201ENST00000355540 USO1O60763 962 aaKnown RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.63□□□□□ -1.038e-7■■■■□ 24.1
TRRAP-201ENST00000355540 SLU7O95391 586 aaKnown RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 ZNF396Q96N95 335 aaPredicted RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 DDX46Q7L014 1031 aaKnown RBP8.63□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC171Q6TFL3 1326 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC175P0C221 793 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 CLIP2Q9UDT6 1046 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC39Q9UFE4 941 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 AMPHP49418 695 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 API5Q9BZZ5 524 aaKnown RBP8.62□□□□□ -1.03
TRRAP-201ENST00000355540 SRCIN1Q9C0H9 1055 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 U2AF1L5P0DN76 240 aaPredicted RBP8.62□□□□□ -1.03
TRRAP-201ENST00000355540 EVA1CP58658 441 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 U2AF1Q01081 240 aaKnown RBP eCLIP8.62□□□□□ -1.033e-8■■■■■ 30.6
TRRAP-201ENST00000355540 SWAP70Q9UH65 585 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 TTC21AQ8NDW8 1320 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 CCDC196A0A1B0GTZ2 297 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 HOMER1Q86YM7 354 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 C10orf67Q8IYJ2 551 aa8.62□□□□□ -1.03
TRRAP-201ENST00000355540 DHX29Q7Z478 1369 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms