RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
PTBP1-201ENST00000349038 BBXQ8WY36 941 aaPredicted RBP18.87■□□□□ 0.61
PTBP1-201ENST00000349038 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
PTBP1-201ENST00000349038 ZNF830Q96NB3 372 aaPredicted RBP18.87■□□□□ 0.61
PTBP1-201ENST00000349038 TET3O43151 1660 aa18.86■□□□□ 0.61
PTBP1-201ENST00000349038 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
PTBP1-201ENST00000349038 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
PTBP1-201ENST00000349038 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
PTBP1-201ENST00000349038 ASXL2Q76L83 1435 aa18.85■□□□□ 0.61
PTBP1-201ENST00000349038 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
PTBP1-201ENST00000349038 PRPF40AO75400 957 aaKnown RBP18.85■□□□□ 0.61
PTBP1-201ENST00000349038 RARSP54136 660 aaKnown RBP18.85■□□□□ 0.61
PTBP1-201ENST00000349038 MYOM2P54296 1465 aa18.85■□□□□ 0.61
PTBP1-201ENST00000349038 C1orf115Q9H7X2 142 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 ABCA6Q8N139 1617 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 MAP3K4Q9Y6R4 1608 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 IQSEC2Q5JU85 1478 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 VGLL3A8MV65 326 aa18.84■□□□□ 0.61
PTBP1-201ENST00000349038 VWDEQ8N2E2 1590 aa18.83■□□□□ 0.61
PTBP1-201ENST00000349038 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-201ENST00000349038 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-201ENST00000349038 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
PTBP1-201ENST00000349038 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
PTBP1-201ENST00000349038 PRIM1P49642 420 aaKnown RBP18.82■□□□□ 0.6
PTBP1-201ENST00000349038 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
PTBP1-201ENST00000349038 RBSNQ9H1K0 784 aa18.82■□□□□ 0.6
PTBP1-201ENST00000349038 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
PTBP1-201ENST00000349038 TCP11L2Q8N4U5 519 aa18.81■□□□□ 0.6
PTBP1-201ENST00000349038 PKP1Q13835 747 aa18.81■□□□□ 0.6
PTBP1-201ENST00000349038 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
PTBP1-201ENST00000349038 FGD1P98174 961 aa18.81■□□□□ 0.6
PTBP1-201ENST00000349038 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
PTBP1-201ENST00000349038 SBNO2Q9Y2G9 1366 aa18.8■□□□□ 0.6
PTBP1-201ENST00000349038 SYCE3A1L190 88 aa18.8■□□□□ 0.6
PTBP1-201ENST00000349038 PDE4CQ08493 712 aa18.79■□□□□ 0.6
PTBP1-201ENST00000349038 SKOR2Q2VWA4 1001 aaPredicted RBP18.79■□□□□ 0.6
PTBP1-201ENST00000349038 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
PTBP1-201ENST00000349038 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
PTBP1-201ENST00000349038 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
PTBP1-201ENST00000349038 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
PTBP1-201ENST00000349038 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
PTBP1-201ENST00000349038 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
PTBP1-201ENST00000349038 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
PTBP1-201ENST00000349038 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
PTBP1-201ENST00000349038 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.59
PTBP1-201ENST00000349038 U2AF1L5P0DN76 240 aaPredicted RBP18.77■□□□□ 0.59
PTBP1-201ENST00000349038 U2AF1Q01081 240 aaKnown RBP eCLIP18.77■□□□□ 0.599e-17■■□□□ 14.4
PTBP1-201ENST00000349038 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.59
PTBP1-201ENST00000349038 KANK1Q14678 1352 aa18.76■□□□□ 0.59
PTBP1-201ENST00000349038 IFT172Q9UG01 1749 aa18.76■□□□□ 0.59
PTBP1-201ENST00000349038 CHMP4BQ9H444 224 aaKnown RBP18.76■□□□□ 0.59
PTBP1-201ENST00000349038 RAB3GAP1Q15042 981 aa18.75■□□□□ 0.59
PTBP1-201ENST00000349038 ARAP3Q8WWN8 1544 aa18.75■□□□□ 0.59
PTBP1-201ENST00000349038 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
PTBP1-201ENST00000349038 ZKSCAN2Q63HK3 967 aa18.75■□□□□ 0.59
PTBP1-201ENST00000349038 ZBTB22O15209 634 aa18.75■□□□□ 0.59
PTBP1-201ENST00000349038 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
PTBP1-201ENST00000349038 MVPQ14764 893 aaKnown RBP18.74■□□□□ 0.59
PTBP1-201ENST00000349038 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
PTBP1-201ENST00000349038 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
PTBP1-201ENST00000349038 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
PTBP1-201ENST00000349038 PPRC1Q5VV67 1664 aaKnown RBP18.74■□□□□ 0.59
PTBP1-201ENST00000349038 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
PTBP1-201ENST00000349038 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
PTBP1-201ENST00000349038 MAP7D2Q96T17 732 aa18.72■□□□□ 0.59
PTBP1-201ENST00000349038 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
PTBP1-201ENST00000349038 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
PTBP1-201ENST00000349038 MROH1Q8NDA8 1641 aa18.72■□□□□ 0.59
PTBP1-201ENST00000349038 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
PTBP1-201ENST00000349038 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
PTBP1-201ENST00000349038 USP32Q8NFA0 1604 aa18.71■□□□□ 0.59
PTBP1-201ENST00000349038 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
PTBP1-201ENST00000349038 FAM69CQ0P6D2 419 aa18.71■□□□□ 0.58
PTBP1-201ENST00000349038 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.58
PTBP1-201ENST00000349038 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.58
PTBP1-201ENST00000349038 CHGAP10645 457 aaKnown RBP18.7■□□□□ 0.58
PTBP1-201ENST00000349038 GDPD2Q9HCC8 539 aa18.7■□□□□ 0.58
PTBP1-201ENST00000349038 ATP7AQ04656 1500 aa18.7■□□□□ 0.58
PTBP1-201ENST00000349038 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
PTBP1-201ENST00000349038 DTNBO60941 627 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 PPP1R9BQ96SB3 815 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 KIF1BO60333 1816 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 ZC3H13Q5T200 1668 aaKnown RBP18.69■□□□□ 0.58
PTBP1-201ENST00000349038 ABCA9Q8IUA7 1624 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
PTBP1-201ENST00000349038 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
PTBP1-201ENST00000349038 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
PTBP1-201ENST00000349038 TRIM27P14373 513 aa18.68■□□□□ 0.58
PTBP1-201ENST00000349038 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
PTBP1-201ENST00000349038 TTC12Q9H892 705 aaPredicted RBP18.68■□□□□ 0.58
PTBP1-201ENST00000349038 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
PTBP1-201ENST00000349038 NSFL1CQ9UNZ2 370 aaKnown RBP18.68■□□□□ 0.58
PTBP1-201ENST00000349038 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
PTBP1-201ENST00000349038 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
PTBP1-201ENST00000349038 EFCAB6Q5THR3 1501 aa18.67■□□□□ 0.58
PTBP1-201ENST00000349038 ZNF771Q7L3S4 317 aaPredicted RBP18.67■□□□□ 0.58
PTBP1-201ENST00000349038 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
PTBP1-201ENST00000349038 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms