RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 NGDNQ8NEJ9 315 aaKnown RBP29.42■■■□□ 2.3
CACNB1-201ENST00000344140 LRRC7Q96NW7 1537 aa29.42■■■□□ 2.3
CACNB1-201ENST00000344140 PMFBP1Q8TBY8 1022 aa29.42■■■□□ 2.3
CACNB1-201ENST00000344140 ADAMTS8Q9UP79 889 aa29.42■■■□□ 2.3
CACNB1-201ENST00000344140 TTC21BQ7Z4L5 1316 aa29.41■■■□□ 2.3
CACNB1-201ENST00000344140 NME9Q86XW9 330 aa29.41■■■□□ 2.3
CACNB1-201ENST00000344140 NCOA3Q9Y6Q9 1424 aa29.41■■■□□ 2.3
CACNB1-201ENST00000344140 RGPD8O14715 1765 aaPredicted RBP29.4■■■□□ 2.3
CACNB1-201ENST00000344140 LTBP4Q8N2S1 1624 aa29.4■■■□□ 2.3
CACNB1-201ENST00000344140 NRKQ7Z2Y5 1582 aa29.4■■■□□ 2.3
CACNB1-201ENST00000344140 COG3Q96JB2 828 aa29.39■■■□□ 2.3
CACNB1-201ENST00000344140 SSH2Q76I76 1423 aa29.39■■■□□ 2.29
CACNB1-201ENST00000344140 TTC21AQ8NDW8 1320 aa29.38■■■□□ 2.29
CACNB1-201ENST00000344140 C19orf44Q9H6X5 657 aa29.37■■■□□ 2.29
CACNB1-201ENST00000344140 XIRP1Q702N8 1843 aaKnown RBP29.36■■■□□ 2.29
CACNB1-201ENST00000344140 PHF8Q9UPP1 1060 aa29.35■■■□□ 2.29
CACNB1-201ENST00000344140 MSH6P52701 1360 aa29.33■■■□□ 2.29
CACNB1-201ENST00000344140 AATKQ6ZMQ8 1374 aa29.33■■■□□ 2.29
CACNB1-201ENST00000344140 DCCP43146 1447 aa29.3■■■□□ 2.28
CACNB1-201ENST00000344140 ZRANB1Q9UGI0 708 aa29.3■■■□□ 2.28
CACNB1-201ENST00000344140 OVOS2A0A0J9YW53 1432 aa29.29■■■□□ 2.28
CACNB1-201ENST00000344140 OVOS2Q6IE36 1432 aa29.29■■■□□ 2.28
CACNB1-201ENST00000344140 ESCO1Q5FWF5 840 aa29.29■■■□□ 2.28
CACNB1-201ENST00000344140 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
CACNB1-201ENST00000344140 SHPRHQ149N8 1683 aa29.28■■■□□ 2.28
CACNB1-201ENST00000344140 POLKQ9UBT6 870 aa29.27■■■□□ 2.28
CACNB1-201ENST00000344140 ATF3P18847 181 aa29.27■■■□□ 2.28
CACNB1-201ENST00000344140 NUDCQ9Y266 331 aa29.26■■■□□ 2.27
CACNB1-201ENST00000344140 USP31Q70CQ4 1352 aa29.25■■■□□ 2.27
CACNB1-201ENST00000344140 COL3A1P02461 1466 aaPredicted RBP29.25■■■□□ 2.27
CACNB1-201ENST00000344140 SMG6Q86US8 1419 aaKnown RBP29.25■■■□□ 2.27
CACNB1-201ENST00000344140 CADPS2Q86UW7 1296 aa29.23■■■□□ 2.27
CACNB1-201ENST00000344140 C1orf167Q5SNV9 1468 aa29.23■■■□□ 2.27
CACNB1-201ENST00000344140 GTF3C3Q9Y5Q9 886 aa29.22■■■□□ 2.27
CACNB1-201ENST00000344140 MAP2P11137 1827 aaKnown RBP29.2■■■□□ 2.27
CACNB1-201ENST00000344140 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
CACNB1-201ENST00000344140 PDE3BQ13370 1112 aa29.2■■■□□ 2.26
CACNB1-201ENST00000344140 CDK12Q9NYV4 1490 aaPredicted RBP29.2■■■□□ 2.26
CACNB1-201ENST00000344140 PSME1Q06323 249 aa29.19■■■□□ 2.26
CACNB1-201ENST00000344140 NGEFQ8N5V2 710 aa29.19■■■□□ 2.26
CACNB1-201ENST00000344140 ORAI2Q96SN7 254 aa29.19■■■□□ 2.26
CACNB1-201ENST00000344140 SENP3-EIF4A1A0A087X0R7 540 aa29.19■■■□□ 2.26
CACNB1-201ENST00000344140 FBLN1P23142 703 aa29.19■■■□□ 2.26
CACNB1-201ENST00000344140 PPM1GO15355 546 aaPredicted RBP29.18■■■□□ 2.26
CACNB1-201ENST00000344140 CCDC146Q8IYE0 955 aa29.18■■■□□ 2.26
CACNB1-201ENST00000344140 MST1RQ04912 1400 aa29.17■■■□□ 2.26
CACNB1-201ENST00000344140 PIK3C2AO00443 1686 aa29.17■■■□□ 2.26
CACNB1-201ENST00000344140 U2AF1L5P0DN76 240 aaPredicted RBP29.17■■■□□ 2.26
CACNB1-201ENST00000344140 U2AF1Q01081 240 aaKnown RBP eCLIP29.17■■■□□ 2.26
CACNB1-201ENST00000344140 EMILIN1Q9Y6C2 1016 aa29.17■■■□□ 2.26
CACNB1-201ENST00000344140 KIF1AQ12756 1690 aa29.16■■■□□ 2.26
CACNB1-201ENST00000344140 SALL2Q9Y467 1007 aaPredicted RBP29.16■■■□□ 2.26
CACNB1-201ENST00000344140 PAK3O75914 559 aaPredicted RBP29.15■■■□□ 2.26
CACNB1-201ENST00000344140 NLRP6P59044 892 aa29.15■■■□□ 2.26
CACNB1-201ENST00000344140 RUNDC1Q96C34 613 aa29.15■■■□□ 2.26
CACNB1-201ENST00000344140 ABTB2Q8N961 1025 aa29.14■■■□□ 2.26
CACNB1-201ENST00000344140 RRS1Q15050 365 aaKnown RBP29.14■■■□□ 2.26
CACNB1-201ENST00000344140 USP54Q70EL1 1684 aa29.14■■■□□ 2.25
CACNB1-201ENST00000344140 U2SURPO15042 1029 aaKnown RBP29.13■■■□□ 2.25
CACNB1-201ENST00000344140 IQSEC2Q5JU85 1478 aa29.13■■■□□ 2.25
CACNB1-201ENST00000344140 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
CACNB1-201ENST00000344140 APAF1O14727 1248 aa29.12■■■□□ 2.25
CACNB1-201ENST00000344140 FOXO3O43524 673 aa29.12■■■□□ 2.25
CACNB1-201ENST00000344140 PNNQ9H307 717 aaKnown RBP29.09■■■□□ 2.25
CACNB1-201ENST00000344140 SLAIN2Q9P270 581 aa29.08■■■□□ 2.25
CACNB1-201ENST00000344140 IL13P35225 146 aa29.06■■■□□ 2.24
CACNB1-201ENST00000344140 ZNF521Q96K83 1311 aa29.06■■■□□ 2.24
CACNB1-201ENST00000344140 NCBP3Q53F19 620 aaKnown RBP29.05■■■□□ 2.24
CACNB1-201ENST00000344140 KRT28Q7Z3Y7 464 aa29.05■■■□□ 2.24
CACNB1-201ENST00000344140 TOM1O60784 492 aa29.04■■■□□ 2.24
CACNB1-201ENST00000344140 NUTM2GQ5VZR2 741 aa29.04■■■□□ 2.24
CACNB1-201ENST00000344140 FCHSD2O94868 740 aa29.04■■■□□ 2.24
CACNB1-201ENST00000344140 TCP11L2Q8N4U5 519 aa29.04■■■□□ 2.24
CACNB1-201ENST00000344140 MAP3K19Q56UN5 1328 aa29.03■■■□□ 2.24
CACNB1-201ENST00000344140 MARF1Q9Y4F3 1742 aaKnown RBP29.03■■■□□ 2.24
CACNB1-201ENST00000344140 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
CACNB1-201ENST00000344140 KIF24Q5T7B8 1368 aa29.03■■■□□ 2.24
CACNB1-201ENST00000344140 SOX12O15370 315 aa29.03■■■□□ 2.24
CACNB1-201ENST00000344140 PLEKHF1Q96S99 279 aa29.02■■■□□ 2.24
CACNB1-201ENST00000344140 FLT4P35916 1363 aa29.01■■■□□ 2.23
CACNB1-201ENST00000344140 UBAP1LF5GYI3 381 aa29■■■□□ 2.23
CACNB1-201ENST00000344140 XPCQ01831 940 aaPredicted RBP29■■■□□ 2.23
CACNB1-201ENST00000344140 NPHP3Q7Z494 1330 aa29■■■□□ 2.23
CACNB1-201ENST00000344140 TRPM3Q9HCF6 1732 aaPredicted RBP29■■■□□ 2.23
CACNB1-201ENST00000344140 GOLGA2Q08379 1002 aa29■■■□□ 2.23
CACNB1-201ENST00000344140 MAPK8IP3Q9UPT6 1336 aa28.99■■■□□ 2.23
CACNB1-201ENST00000344140 KCNH5Q8NCM2 988 aa28.99■■■□□ 2.23
CACNB1-201ENST00000344140 PEAK1Q9H792 1746 aa28.99■■■□□ 2.23
CACNB1-201ENST00000344140 AMPHP49418 695 aa28.98■■■□□ 2.23
CACNB1-201ENST00000344140 CDCA7LQ96GN5 454 aa28.98■■■□□ 2.23
CACNB1-201ENST00000344140 SUPT16HQ9Y5B9 1047 aaKnown RBP28.98■■■□□ 2.23
CACNB1-201ENST00000344140 NEFLP07196 543 aa28.97■■■□□ 2.23
CACNB1-201ENST00000344140 CCDC27Q2M243 656 aa28.97■■■□□ 2.23
CACNB1-201ENST00000344140 EIF4A2Q14240 407 aaKnown RBP28.97■■■□□ 2.23
CACNB1-201ENST00000344140 BRINP3Q76B58 766 aa28.97■■■□□ 2.23
CACNB1-201ENST00000344140 RSPH6AQ9H0K4 717 aa28.97■■■□□ 2.23
CACNB1-201ENST00000344140 HSP90AB2PQ58FF8 381 aa28.96■■■□□ 2.23
CACNB1-201ENST00000344140 NEFMP07197 916 aa28.95■■■□□ 2.23
CACNB1-201ENST00000344140 PHF23Q9BUL5 403 aaPredicted RBP28.95■■■□□ 2.22
CACNB1-201ENST00000344140 WWC1Q8IX03 1113 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms