RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 PLEKHG5O94827 1062 aa24.75■■□□□ 1.55
VSTM1-201ENST00000338372 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
VSTM1-201ENST00000338372 SIN3AQ96ST3 1273 aa24.75■■□□□ 1.55
VSTM1-201ENST00000338372 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
VSTM1-201ENST00000338372 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
VSTM1-201ENST00000338372 HAP1P54257 671 aaPredicted RBP24.72■■□□□ 1.55
VSTM1-201ENST00000338372 PHRF1Q9P1Y6 1649 aaKnown RBP24.72■■□□□ 1.55
VSTM1-201ENST00000338372 ACEP12821 1306 aa24.71■■□□□ 1.55
VSTM1-201ENST00000338372 CCDC61Q9Y6R9 512 aa24.71■■□□□ 1.55
VSTM1-201ENST00000338372 QRICH2Q9H0J4 1663 aa24.7■■□□□ 1.54
VSTM1-201ENST00000338372 NBPF8Q3BBV2 869 aa24.7■■□□□ 1.54
VSTM1-201ENST00000338372 SEPT12Q8IYM1 358 aa24.69■■□□□ 1.54
VSTM1-201ENST00000338372 BTG4Q9NY30 223 aa24.68■■□□□ 1.54
VSTM1-201ENST00000338372 CENPJQ9HC77 1338 aaPredicted RBP24.67■■□□□ 1.54
VSTM1-201ENST00000338372 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
VSTM1-201ENST00000338372 CCDC125Q86Z20 511 aa24.66■■□□□ 1.54
VSTM1-201ENST00000338372 CABP2Q9NPB3 220 aa24.62■■□□□ 1.53
VSTM1-201ENST00000338372 KIAA0232Q92628 1395 aa24.62■■□□□ 1.53
VSTM1-201ENST00000338372 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
VSTM1-201ENST00000338372 SPATA31A5Q5VU36 1347 aa24.61■■□□□ 1.53
VSTM1-201ENST00000338372 SPATA31A7Q8IWB4 1347 aa24.61■■□□□ 1.53
VSTM1-201ENST00000338372 PPIP5K1Q6PFW1 1433 aa24.61■■□□□ 1.53
VSTM1-201ENST00000338372 NRKQ7Z2Y5 1582 aa24.61■■□□□ 1.53
VSTM1-201ENST00000338372 BLMP54132 1417 aaPredicted RBP24.61■■□□□ 1.53
VSTM1-201ENST00000338372 NUTM2GQ5VZR2 741 aa24.6■■□□□ 1.53
VSTM1-201ENST00000338372 USP19O94966 1318 aa24.6■■□□□ 1.53
VSTM1-201ENST00000338372 LMO7Q8WWI1 1683 aa24.59■■□□□ 1.53
VSTM1-201ENST00000338372 NEUROD1Q13562 356 aa24.58■■□□□ 1.53
VSTM1-201ENST00000338372 FAM98CQ17RN3 349 aaKnown RBP24.58■■□□□ 1.53
VSTM1-201ENST00000338372 PRDM11Q9NQV5 511 aa24.58■■□□□ 1.53
VSTM1-201ENST00000338372 CCDC9Q9Y3X0 531 aaKnown RBP24.58■■□□□ 1.53
VSTM1-201ENST00000338372 SSH2Q76I76 1423 aa24.58■■□□□ 1.53
VSTM1-201ENST00000338372 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
VSTM1-201ENST00000338372 CHRNA2Q15822 529 aa24.57■■□□□ 1.52
VSTM1-201ENST00000338372 KRT27Q7Z3Y8 459 aa24.57■■□□□ 1.52
VSTM1-201ENST00000338372 CAMTA1Q9Y6Y1 1673 aa24.56■■□□□ 1.52
VSTM1-201ENST00000338372 SRCAPQ6ZRS2 3230 aa24.55■■□□□ 1.52
VSTM1-201ENST00000338372 CABP1Q9NZU7 370 aa24.55■■□□□ 1.52
VSTM1-201ENST00000338372 CPDO75976 1380 aa24.54■■□□□ 1.52
VSTM1-201ENST00000338372 ZC3H6P61129 1189 aaKnown RBP24.54■■□□□ 1.52
VSTM1-201ENST00000338372 SPATA31A1Q5TZJ5 1347 aa24.54■■□□□ 1.52
VSTM1-201ENST00000338372 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
VSTM1-201ENST00000338372 USP6P35125 1406 aa24.53■■□□□ 1.52
VSTM1-201ENST00000338372 ABTB2Q8N961 1025 aa24.53■■□□□ 1.52
VSTM1-201ENST00000338372 AKAP12Q02952 1782 aa24.52■■□□□ 1.52
VSTM1-201ENST00000338372 DEFB132Q7Z7B7 95 aa24.52■■□□□ 1.52
VSTM1-201ENST00000338372 ROCK2O75116 1388 aaKnown RBP24.51■■□□□ 1.51
VSTM1-201ENST00000338372 PIK3C2AO00443 1686 aa24.5■■□□□ 1.51
VSTM1-201ENST00000338372 GCP02774 474 aa24.49■■□□□ 1.51
VSTM1-201ENST00000338372 SLIT3O75094 1523 aa24.49■■□□□ 1.51
VSTM1-201ENST00000338372 COL18A1P39060 1754 aa24.49■■□□□ 1.51
VSTM1-201ENST00000338372 EVC2Q86UK5 1308 aa24.48■■□□□ 1.51
VSTM1-201ENST00000338372 NLRP13Q86W25 1043 aa24.47■■□□□ 1.51
VSTM1-201ENST00000338372 FAM182BQ5T319 152 aa24.46■■□□□ 1.51
VSTM1-201ENST00000338372 ZRANB1Q9UGI0 708 aa24.46■■□□□ 1.51
VSTM1-201ENST00000338372 TNS1Q9HBL0 1735 aaKnown RBP24.46■■□□□ 1.51
VSTM1-201ENST00000338372 CPSF1Q10570 1443 aaKnown RBP24.44■■□□□ 1.5
VSTM1-201ENST00000338372 RGPD1P0DJD0 1748 aa24.44■■□□□ 1.5
VSTM1-201ENST00000338372 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
VSTM1-201ENST00000338372 LARP1Q6PKG0 1096 aaKnown RBP24.44■■□□□ 1.5
VSTM1-201ENST00000338372 STRN4Q9NRL3 753 aa24.44■■□□□ 1.5
VSTM1-201ENST00000338372 BARGINQ6ZT62 677 aa24.43■■□□□ 1.5
VSTM1-201ENST00000338372 COL5A2P05997 1499 aaPredicted RBP24.42■■□□□ 1.5
VSTM1-201ENST00000338372 MON2Q7Z3U7 1717 aa24.41■■□□□ 1.5
VSTM1-201ENST00000338372 TTC21BQ7Z4L5 1316 aa24.4■■□□□ 1.5
VSTM1-201ENST00000338372 A0A0G2JS52 829 aa24.4■■□□□ 1.5
VSTM1-201ENST00000338372 NLRP6P59044 892 aa24.4■■□□□ 1.5
VSTM1-201ENST00000338372 MYT1Q01538 1121 aa24.4■■□□□ 1.5
VSTM1-201ENST00000338372 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.5
VSTM1-201ENST00000338372 DISP2A7MBM2 1401 aa24.39■■□□□ 1.5
VSTM1-201ENST00000338372 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
VSTM1-201ENST00000338372 AATKQ6ZMQ8 1374 aa24.39■■□□□ 1.49
VSTM1-201ENST00000338372 RGPD5Q99666 1765 aa24.39■■□□□ 1.49
VSTM1-201ENST00000338372 PARP4Q9UKK3 1724 aaKnown RBP24.38■■□□□ 1.49
VSTM1-201ENST00000338372 SF3B2Q13435 895 aaKnown RBP24.37■■□□□ 1.49
VSTM1-201ENST00000338372 EVA1CP58658 441 aa24.36■■□□□ 1.49
VSTM1-201ENST00000338372 AXIN2Q9Y2T1 843 aa24.36■■□□□ 1.49
VSTM1-201ENST00000338372 USP54Q70EL1 1684 aa24.36■■□□□ 1.49
VSTM1-201ENST00000338372 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
VSTM1-201ENST00000338372 USP35Q9P2H5 1018 aa24.35■■□□□ 1.49
VSTM1-201ENST00000338372 NFAT5O94916 1531 aa24.35■■□□□ 1.49
VSTM1-201ENST00000338372 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
VSTM1-201ENST00000338372 BAG6P46379 1132 aa24.33■■□□□ 1.49
VSTM1-201ENST00000338372 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
VSTM1-201ENST00000338372 ARHGEF25Q86VW2 580 aa24.33■■□□□ 1.49
VSTM1-201ENST00000338372 THRAP3Q9Y2W1 955 aaKnown RBP24.33■■□□□ 1.49
VSTM1-201ENST00000338372 TTC21AQ8NDW8 1320 aa24.33■■□□□ 1.48
VSTM1-201ENST00000338372 CRB1P82279 1406 aa24.32■■□□□ 1.48
VSTM1-201ENST00000338372 PEAK1Q9H792 1746 aa24.32■■□□□ 1.48
VSTM1-201ENST00000338372 WNK3Q9BYP7 1800 aa24.31■■□□□ 1.48
VSTM1-201ENST00000338372 FAM196AQ6ZSG2 479 aa24.31■■□□□ 1.48
VSTM1-201ENST00000338372 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
VSTM1-201ENST00000338372 TONSLQ96HA7 1378 aa24.3■■□□□ 1.48
VSTM1-201ENST00000338372 TRIM26Q12899 539 aaPredicted RBP24.3■■□□□ 1.48
VSTM1-201ENST00000338372 USP31Q70CQ4 1352 aa24.29■■□□□ 1.48
VSTM1-201ENST00000338372 CAMKK2Q96RR4 588 aa24.29■■□□□ 1.48
VSTM1-201ENST00000338372 SBF2Q86WG5 1849 aa24.28■■□□□ 1.48
VSTM1-201ENST00000338372 TRIM37O94972 964 aa24.28■■□□□ 1.48
VSTM1-201ENST00000338372 TESK2Q96S53 571 aa24.28■■□□□ 1.48
VSTM1-201ENST00000338372 LRRC37A3O60309 1634 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms