RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 USP6P35125 1406 aa21.25■□□□□ 0.99
SEC13-201ENST00000337354 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
SEC13-201ENST00000337354 COL22A1Q8NFW1 1626 aaPredicted RBP21.24■□□□□ 0.99
SEC13-201ENST00000337354 PAK3O75914 559 aaPredicted RBP21.24■□□□□ 0.99
SEC13-201ENST00000337354 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
SEC13-201ENST00000337354 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
SEC13-201ENST00000337354 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
SEC13-201ENST00000337354 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
SEC13-201ENST00000337354 A0A1W2PP64 1363 aa21.23■□□□□ 0.99
SEC13-201ENST00000337354 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
SEC13-201ENST00000337354 ARHGEF10O15013 1369 aa21.22■□□□□ 0.99
SEC13-201ENST00000337354 TTC21AQ8NDW8 1320 aa21.22■□□□□ 0.99
SEC13-201ENST00000337354 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
SEC13-201ENST00000337354 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
SEC13-201ENST00000337354 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
SEC13-201ENST00000337354 ABTB2Q8N961 1025 aa21.21■□□□□ 0.99
SEC13-201ENST00000337354 TRPM3Q9HCF6 1732 aaPredicted RBP21.2■□□□□ 0.98
SEC13-201ENST00000337354 TNS3Q68CZ2 1445 aa21.2■□□□□ 0.98
SEC13-201ENST00000337354 PANK3Q9H999 370 aa21.2■□□□□ 0.98
SEC13-201ENST00000337354 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
SEC13-201ENST00000337354 MARF1Q9Y4F3 1742 aaKnown RBP21.18■□□□□ 0.98
SEC13-201ENST00000337354 ABCA3Q99758 1704 aa21.17■□□□□ 0.98
SEC13-201ENST00000337354 NLRP13Q86W25 1043 aa21.17■□□□□ 0.98
SEC13-201ENST00000337354 CARD14Q9BXL6 1004 aa21.17■□□□□ 0.98
SEC13-201ENST00000337354 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
SEC13-201ENST00000337354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
SEC13-201ENST00000337354 NLRP6P59044 892 aa21.14■□□□□ 0.98
SEC13-201ENST00000337354 ILDR2Q71H61 639 aa21.14■□□□□ 0.98
SEC13-201ENST00000337354 ALS2Q96Q42 1657 aa21.14■□□□□ 0.97
SEC13-201ENST00000337354 KNSTRNQ9Y448 316 aa21.11■□□□□ 0.97
SEC13-201ENST00000337354 USP31Q70CQ4 1352 aa21.11■□□□□ 0.97
SEC13-201ENST00000337354 FYB1O15117 783 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 ADAMTS2O95450 1211 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 NME9Q86XW9 330 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 CGNL1Q0VF96 1302 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
SEC13-201ENST00000337354 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 HAP1P54257 671 aaPredicted RBP21.1■□□□□ 0.97
SEC13-201ENST00000337354 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 C8orf37Q96NL8 207 aa21.1■□□□□ 0.97
SEC13-201ENST00000337354 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
SEC13-201ENST00000337354 KCNH5Q8NCM2 988 aa21.08■□□□□ 0.96
SEC13-201ENST00000337354 CABLES1Q8TDN4 633 aa21.08■□□□□ 0.96
SEC13-201ENST00000337354 COG3Q96JB2 828 aa21.08■□□□□ 0.96
SEC13-201ENST00000337354 MYOM1P52179 1685 aa21.08■□□□□ 0.96
SEC13-201ENST00000337354 USP19O94966 1318 aa21.08■□□□□ 0.96
SEC13-201ENST00000337354 AKAP12Q02952 1782 aa21.07■□□□□ 0.96
SEC13-201ENST00000337354 GCP02774 474 aa21.07■□□□□ 0.96
SEC13-201ENST00000337354 AFF2P51816 1311 aa21.07■□□□□ 0.96
SEC13-201ENST00000337354 CRYBG1Q9Y4K1 1723 aa21.06■□□□□ 0.96
SEC13-201ENST00000337354 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
SEC13-201ENST00000337354 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
SEC13-201ENST00000337354 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
SEC13-201ENST00000337354 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
SEC13-201ENST00000337354 PLCH1Q4KWH8 1693 aa21.03■□□□□ 0.96
SEC13-201ENST00000337354 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
SEC13-201ENST00000337354 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
SEC13-201ENST00000337354 ZNF772Q68DY9 489 aaPredicted RBP21.03■□□□□ 0.96
SEC13-201ENST00000337354 POTEAQ6S8J7 498 aa21.03■□□□□ 0.96
SEC13-201ENST00000337354 NSD2O96028 1365 aa21.02■□□□□ 0.96
SEC13-201ENST00000337354 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
SEC13-201ENST00000337354 NGLY1Q96IV0 654 aa21.02■□□□□ 0.96
SEC13-201ENST00000337354 OVOS2A0A0J9YW53 1432 aa21.01■□□□□ 0.95
SEC13-201ENST00000337354 OVOS2Q6IE36 1432 aa21.01■□□□□ 0.95
SEC13-201ENST00000337354 NPC1L1Q9UHC9 1359 aa21■□□□□ 0.95
SEC13-201ENST00000337354 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.99■□□□□ 0.95
SEC13-201ENST00000337354 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
SEC13-201ENST00000337354 CPDO75976 1380 aa20.98■□□□□ 0.95
SEC13-201ENST00000337354 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
SEC13-201ENST00000337354 SLIT3O75094 1523 aa20.97■□□□□ 0.95
SEC13-201ENST00000337354 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
SEC13-201ENST00000337354 NWD2Q9ULI1 1742 aa20.97■□□□□ 0.95
SEC13-201ENST00000337354 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
SEC13-201ENST00000337354 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
SEC13-201ENST00000337354 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
SEC13-201ENST00000337354 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
SEC13-201ENST00000337354 SOX12O15370 315 aa20.95■□□□□ 0.94
SEC13-201ENST00000337354 FNBP4Q8N3X1 1017 aaPredicted RBP20.95■□□□□ 0.94
SEC13-201ENST00000337354 USP21Q9UK80 565 aa20.95■□□□□ 0.94
SEC13-201ENST00000337354 KIAA0232Q92628 1395 aa20.95■□□□□ 0.94
SEC13-201ENST00000337354 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
SEC13-201ENST00000337354 AATKQ6ZMQ8 1374 aa20.92■□□□□ 0.94
SEC13-201ENST00000337354 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
SEC13-201ENST00000337354 SLIT2O94813 1529 aa20.91■□□□□ 0.94
SEC13-201ENST00000337354 SOCS7O14512 581 aa20.9■□□□□ 0.94
SEC13-201ENST00000337354 USP54Q70EL1 1684 aa20.9■□□□□ 0.94
SEC13-201ENST00000337354 RXRBP28702 533 aa20.89■□□□□ 0.93
SEC13-201ENST00000337354 CHRNA2Q15822 529 aa20.89■□□□□ 0.93
SEC13-201ENST00000337354 QTRT2Q9H974 415 aaKnown RBP20.89■□□□□ 0.93
SEC13-201ENST00000337354 ATRNO75882 1429 aa20.89■□□□□ 0.93
SEC13-201ENST00000337354 BCL9LQ86UU0 1499 aa20.89■□□□□ 0.93
SEC13-201ENST00000337354 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
SEC13-201ENST00000337354 BTG4Q9NY30 223 aa20.88■□□□□ 0.93
SEC13-201ENST00000337354 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
SEC13-201ENST00000337354 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
SEC13-201ENST00000337354 KIF24Q5T7B8 1368 aa20.88■□□□□ 0.93
SEC13-201ENST00000337354 FBLN1P23142 703 aa20.87■□□□□ 0.93
SEC13-201ENST00000337354 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
SEC13-201ENST00000337354 AMPHP49418 695 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms