RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 C1orf115Q9H7X2 142 aa20.64■□□□□ 0.89
TRAPPC11-201ENST00000334690 G3V3G9 751 aa20.64■□□□□ 0.89
TRAPPC11-201ENST00000334690 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
TRAPPC11-201ENST00000334690 CCDC73Q6ZRK6 1079 aa20.64■□□□□ 0.89
TRAPPC11-201ENST00000334690 AIMP1Q12904 312 aaKnown RBP20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 PLEKHO1Q53GL0 409 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 SASS6Q6UVJ0 657 aa20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 MARCH6O60337 910 aa20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 RTEL1-TNFRSF6BF6WH68 1400 aa20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
TRAPPC11-201ENST00000334690 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
TRAPPC11-201ENST00000334690 ATF3P18847 181 aa20.62■□□□□ 0.89
TRAPPC11-201ENST00000334690 PDCP20941 246 aa20.62■□□□□ 0.89
TRAPPC11-201ENST00000334690 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 HOOK1Q9UJC3 728 aaKnown RBP20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 RALYLQ86SE5 291 aaKnown RBP20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 HIP1O00291 1037 aa20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 CHD1LQ86WJ1 897 aa20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
TRAPPC11-201ENST00000334690 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
TRAPPC11-201ENST00000334690 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
TRAPPC11-201ENST00000334690 FSD1Q9BTV5 496 aa20.6■□□□□ 0.89
TRAPPC11-201ENST00000334690 CWC22Q9HCG8 908 aaKnown RBP20.6■□□□□ 0.89
TRAPPC11-201ENST00000334690 PES1O00541 588 aaKnown RBP20.6■□□□□ 0.89
TRAPPC11-201ENST00000334690 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
TRAPPC11-201ENST00000334690 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
TRAPPC11-201ENST00000334690 NFE2L2Q16236 605 aa20.58■□□□□ 0.88
TRAPPC11-201ENST00000334690 CIZ1Q9ULV3 898 aaPredicted RBP20.58■□□□□ 0.88
TRAPPC11-201ENST00000334690 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.88
TRAPPC11-201ENST00000334690 AMOTL1Q8IY63 956 aa20.58■□□□□ 0.88
TRAPPC11-201ENST00000334690 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.88
TRAPPC11-201ENST00000334690 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC11-201ENST00000334690 CAVIN1Q6NZI2 390 aaKnown RBP20.57■□□□□ 0.88
TRAPPC11-201ENST00000334690 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
TRAPPC11-201ENST00000334690 SAFBQ15424 915 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 K7ELQ4 463 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 ANKRD20A12PQ8NF67 263 aa20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 ABCC11Q96J66 1382 aa20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 LETM1O95202 739 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 NFXL1Q6ZNB6 911 aa20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 SRCIN1Q9C0H9 1055 aa20.56■□□□□ 0.88
TRAPPC11-201ENST00000334690 ERICH2A1L162 156 aa20.55■□□□□ 0.88
TRAPPC11-201ENST00000334690 TPM2P07951 284 aa20.55■□□□□ 0.88
TRAPPC11-201ENST00000334690 CCDC39Q9UFE4 941 aa20.55■□□□□ 0.88
TRAPPC11-201ENST00000334690 WASHC4Q2M389 1173 aa20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 VPS37DQ86XT2 251 aa20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 RARSP54136 660 aaKnown RBP20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 KIF14Q15058 1648 aa20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 ZNF592Q92610 1267 aa20.54■□□□□ 0.88
TRAPPC11-201ENST00000334690 PRPF40AO75400 957 aaKnown RBP20.53■□□□□ 0.88
TRAPPC11-201ENST00000334690 IPO7O95373 1038 aaKnown RBP20.53■□□□□ 0.88
TRAPPC11-201ENST00000334690 RNF214Q8ND24 703 aa20.53■□□□□ 0.88
TRAPPC11-201ENST00000334690 CCDC47Q96A33 483 aaKnown RBP20.53■□□□□ 0.88
TRAPPC11-201ENST00000334690 ESCO1Q5FWF5 840 aa20.52■□□□□ 0.88
TRAPPC11-201ENST00000334690 TMEM57Q8N5G2 664 aa20.52■□□□□ 0.88
TRAPPC11-201ENST00000334690 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
TRAPPC11-201ENST00000334690 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
TRAPPC11-201ENST00000334690 CCAR2Q8N163 923 aaKnown RBP20.51■□□□□ 0.87
TRAPPC11-201ENST00000334690 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
TRAPPC11-201ENST00000334690 HOMER1Q86YM7 354 aa20.51■□□□□ 0.87
TRAPPC11-201ENST00000334690 NAT10Q9H0A0 1025 aaKnown RBP20.51■□□□□ 0.87
TRAPPC11-201ENST00000334690 MCM4P33991 863 aa20.5■□□□□ 0.87
TRAPPC11-201ENST00000334690 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
TRAPPC11-201ENST00000334690 GPS2Q13227 327 aa20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 BRPF3Q9ULD4 1205 aa20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 TNNT3P45378 269 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 SSH1Q8WYL5 1049 aa20.49■□□□□ 0.87
TRAPPC11-201ENST00000334690 A0A0U1RQG5 324 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 CCDC173Q0VFZ6 552 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 RRS1Q15050 365 aaKnown RBP20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 WDR33Q9C0J8 1336 aaKnown RBP20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 IFT57Q9NWB7 429 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 CEP89Q96ST8 783 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
TRAPPC11-201ENST00000334690 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
TRAPPC11-201ENST00000334690 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
TRAPPC11-201ENST00000334690 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC11-201ENST00000334690 TSPY26PQ9H489 355 aa20.47■□□□□ 0.87
TRAPPC11-201ENST00000334690 CCDC70Q6NSX1 233 aa20.46■□□□□ 0.87
TRAPPC11-201ENST00000334690 ANKRD1Q15327 319 aa20.46■□□□□ 0.87
TRAPPC11-201ENST00000334690 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
TRAPPC11-201ENST00000334690 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
TRAPPC11-201ENST00000334690 CCDC27Q2M243 656 aa20.46■□□□□ 0.87
TRAPPC11-201ENST00000334690 FIBPO43427 364 aa20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.86
TRAPPC11-201ENST00000334690 FOSBP53539 338 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms