RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ACEP12821 1306 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 BRINP3Q76B58 766 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 KRT28Q7Z3Y7 464 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 COG3Q96JB2 828 aa7.03□□□□□ -1.28
LRIT3-201ENST00000327908 PXDNQ92626 1479 aa7.02□□□□□ -1.28
LRIT3-201ENST00000327908 AATKQ6ZMQ8 1374 aa7.02□□□□□ -1.29
LRIT3-201ENST00000327908 TTC21BQ7Z4L5 1316 aa7.02□□□□□ -1.29
LRIT3-201ENST00000327908 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
LRIT3-201ENST00000327908 PRR36Q9H6K5 1346 aa7.02□□□□□ -1.29
LRIT3-201ENST00000327908 CFAP53Q96M91 514 aa7.02□□□□□ -1.29
LRIT3-201ENST00000327908 HIRIP3Q9BW71 556 aaPredicted RBP7.02□□□□□ -1.29
LRIT3-201ENST00000327908 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
LRIT3-201ENST00000327908 SSH2Q76I76 1423 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 NSD3Q9BZ95 1437 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 A0A1W2PP64 1363 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 SLIT3O75094 1523 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 ALS2Q96Q42 1657 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 PNNQ9H307 717 aaKnown RBP7.01□□□□□ -1.29
LRIT3-201ENST00000327908 USP19O94966 1318 aa7.01□□□□□ -1.29
LRIT3-201ENST00000327908 COL16A1Q07092 1604 aaPredicted RBP7□□□□□ -1.29
LRIT3-201ENST00000327908 ANP32CO43423 234 aa7□□□□□ -1.29
LRIT3-201ENST00000327908 SMG6Q86US8 1419 aaKnown RBP7□□□□□ -1.29
LRIT3-201ENST00000327908 POLR3GLQ9BT43 218 aa7□□□□□ -1.29
LRIT3-201ENST00000327908 CPDO75976 1380 aa7□□□□□ -1.29
LRIT3-201ENST00000327908 PANK3Q9H999 370 aa6.99□□□□□ -1.29
LRIT3-201ENST00000327908 PHRF1Q9P1Y6 1649 aaKnown RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 FAM208AQ9UK61 1670 aaKnown RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 C11orf95C9JLR9 678 aaPredicted RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 HMGB2P26583 209 aaKnown RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 HAP1P54257 671 aaPredicted RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 INSRP06213 1382 aa6.99□□□□□ -1.29
LRIT3-201ENST00000327908 OVOS2A0A0J9YW53 1432 aa6.99□□□□□ -1.29
LRIT3-201ENST00000327908 BLMP54132 1417 aaPredicted RBP6.99□□□□□ -1.29
LRIT3-201ENST00000327908 OVOS2Q6IE36 1432 aa6.99□□□□□ -1.29
LRIT3-201ENST00000327908 CD163L1Q9NR16 1453 aa6.99□□□□□ -1.29
LRIT3-201ENST00000327908 MORC1Q86VD1 984 aa6.98□□□□□ -1.29
LRIT3-201ENST00000327908 PNPLA6Q8IY17 1366 aa6.98□□□□□ -1.29
LRIT3-201ENST00000327908 SLC12A5Q9H2X9 1139 aa6.98□□□□□ -1.29
LRIT3-201ENST00000327908 COL14A1Q05707 1796 aaKnown RBP6.97□□□□□ -1.29
LRIT3-201ENST00000327908 ABTB2Q8N961 1025 aa6.97□□□□□ -1.29
LRIT3-201ENST00000327908 SENP3Q9H4L4 574 aaPredicted RBP6.97□□□□□ -1.29
LRIT3-201ENST00000327908 NGEFQ8N5V2 710 aa6.97□□□□□ -1.29
LRIT3-201ENST00000327908 NUDCQ9Y266 331 aa6.97□□□□□ -1.29
LRIT3-201ENST00000327908 RGPD8O14715 1765 aaPredicted RBP6.97□□□□□ -1.29
LRIT3-201ENST00000327908 CDK12Q9NYV4 1490 aaPredicted RBP6.97□□□□□ -1.29
LRIT3-201ENST00000327908 ORAI2Q96SN7 254 aa6.96□□□□□ -1.29
LRIT3-201ENST00000327908 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.29
LRIT3-201ENST00000327908 MYBBP1AQ9BQG0 1328 aaKnown RBP6.96□□□□□ -1.3
LRIT3-201ENST00000327908 FOXO3O43524 673 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 PAK3O75914 559 aaPredicted RBP6.96□□□□□ -1.3
LRIT3-201ENST00000327908 NLRP6P59044 892 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 PMFBP1Q8TBY8 1022 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 CDCA7Q9BWT1 371 aaPredicted RBP6.96□□□□□ -1.3
LRIT3-201ENST00000327908 NEFMP07197 916 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 PIK3C2AO00443 1686 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 FLT4P35916 1363 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 PARD3Q8TEW0 1356 aa6.96□□□□□ -1.3
LRIT3-201ENST00000327908 CCER2I3L3R5 266 aa6.95□□□□□ -1.3
LRIT3-201ENST00000327908 PIP4K2BP78356 416 aa6.95□□□□□ -1.3
LRIT3-201ENST00000327908 AMER1Q5JTC6 1135 aaPredicted RBP6.95□□□□□ -1.3
LRIT3-201ENST00000327908 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.95□□□□□ -1.3
LRIT3-201ENST00000327908 MARF1Q9Y4F3 1742 aaKnown RBP6.95□□□□□ -1.3
LRIT3-201ENST00000327908 ABCA3Q99758 1704 aa6.94□□□□□ -1.3
LRIT3-201ENST00000327908 CRYBG1Q9Y4K1 1723 aa6.94□□□□□ -1.3
LRIT3-201ENST00000327908 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
LRIT3-201ENST00000327908 NCBP3Q53F19 620 aaKnown RBP6.94□□□□□ -1.3
LRIT3-201ENST00000327908 NFAT5O94916 1531 aa6.94□□□□□ -1.3
LRIT3-201ENST00000327908 FYB1O15117 783 aa6.93□□□□□ -1.3
LRIT3-201ENST00000327908 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
LRIT3-201ENST00000327908 NUTM2FA1L443 756 aa6.93□□□□□ -1.3
LRIT3-201ENST00000327908 AMPHP49418 695 aa6.93□□□□□ -1.3
LRIT3-201ENST00000327908 DDX10Q13206 875 aaKnown RBP6.93□□□□□ -1.3
LRIT3-201ENST00000327908 ZNF772Q68DY9 489 aaPredicted RBP6.93□□□□□ -1.3
LRIT3-201ENST00000327908 THRAP3Q9Y2W1 955 aaKnown RBP6.93□□□□□ -1.3
LRIT3-201ENST00000327908 LMOD2Q6P5Q4 547 aa6.92□□□□□ -1.3
LRIT3-201ENST00000327908 IP6K1Q92551 441 aa6.92□□□□□ -1.3
LRIT3-201ENST00000327908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.92□□□□□ -1.3
LRIT3-201ENST00000327908 GCP02774 474 aa6.92□□□□□ -1.3
LRIT3-201ENST00000327908 PRDM11Q9NQV5 511 aa6.92□□□□□ -1.3
LRIT3-201ENST00000327908 ARHGEF25Q86VW2 580 aa6.91□□□□□ -1.3
LRIT3-201ENST00000327908 RBM33Q96EV2 1170 aaKnown RBP6.91□□□□□ -1.3
LRIT3-201ENST00000327908 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
LRIT3-201ENST00000327908 NME9Q86XW9 330 aa6.91□□□□□ -1.3
LRIT3-201ENST00000327908 HSPA1LP34931 641 aa6.9□□□□□ -1.3
LRIT3-201ENST00000327908 PRKRIP1Q9H875 184 aaPredicted RBP6.9□□□□□ -1.3
LRIT3-201ENST00000327908 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
LRIT3-201ENST00000327908 DIAPH1O60610 1272 aaKnown RBP6.89□□□□□ -1.31
LRIT3-201ENST00000327908 LMOD3Q0VAK6 560 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 WDR43Q15061 677 aaKnown RBP eCLIP6.89□□□□□ -1.31
LRIT3-201ENST00000327908 LMO7Q8WWI1 1683 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 PLCH1Q4KWH8 1693 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 GGNBP2Q9H3C7 697 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 CAMTA1Q9Y6Y1 1673 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 SLIT2O94813 1529 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 PPP2R1AP30153 589 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 EVA1CP58658 441 aa6.89□□□□□ -1.31
LRIT3-201ENST00000327908 TRPC5Q9UL62 973 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms