RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 SLC3A2P08195 630 aaKnown RBP16.83■□□□□ 0.28
PCM1-201ENST00000325083 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
PCM1-201ENST00000325083 KIAA0754O94854 1291 aa16.82■□□□□ 0.28
PCM1-201ENST00000325083 MPNDQ8N594 471 aa16.82■□□□□ 0.28
PCM1-201ENST00000325083 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
PCM1-201ENST00000325083 ZNHIT6Q9NWK9 470 aaKnown RBP16.82■□□□□ 0.28
PCM1-201ENST00000325083 CCDC66A2RUB6 948 aa16.81■□□□□ 0.28
PCM1-201ENST00000325083 CCP110O43303 1012 aa16.81■□□□□ 0.28
PCM1-201ENST00000325083 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
PCM1-201ENST00000325083 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
PCM1-201ENST00000325083 NEBLO76041 1014 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
PCM1-201ENST00000325083 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
PCM1-201ENST00000325083 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
PCM1-201ENST00000325083 PPM1FP49593 454 aaPredicted RBP16.79■□□□□ 0.28
PCM1-201ENST00000325083 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
PCM1-201ENST00000325083 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 FIBPO43427 364 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCM1-201ENST00000325083 USP47Q96K76 1375 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 ATF3P18847 181 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 TRAK2O60296 914 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 STK38Q15208 465 aa16.79■□□□□ 0.28
PCM1-201ENST00000325083 MRE11P49959 708 aa16.77■□□□□ 0.28
PCM1-201ENST00000325083 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
PCM1-201ENST00000325083 GNAI1P63096 354 aa16.77■□□□□ 0.28
PCM1-201ENST00000325083 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
PCM1-201ENST00000325083 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
PCM1-201ENST00000325083 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
PCM1-201ENST00000325083 PIBF1Q8WXW3 757 aa16.76■□□□□ 0.27
PCM1-201ENST00000325083 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
PCM1-201ENST00000325083 FHOD3Q2V2M9 1422 aa16.76■□□□□ 0.27
PCM1-201ENST00000325083 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
PCM1-201ENST00000325083 NEK4P51957 841 aa16.75■□□□□ 0.27
PCM1-201ENST00000325083 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
PCM1-201ENST00000325083 SIL1Q9H173 461 aa16.75■□□□□ 0.27
PCM1-201ENST00000325083 GOLGA6L7A0A1B0GV03 622 aa16.74■□□□□ 0.27
PCM1-201ENST00000325083 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
PCM1-201ENST00000325083 TAF3Q5VWG9 929 aa16.74■□□□□ 0.27
PCM1-201ENST00000325083 STIM1Q13586 685 aa16.74■□□□□ 0.27
PCM1-201ENST00000325083 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
PCM1-201ENST00000325083 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
PCM1-201ENST00000325083 ERICH4A6NGS2 130 aa16.73■□□□□ 0.27
PCM1-201ENST00000325083 EZRP15311 586 aaKnown RBP16.73■□□□□ 0.27
PCM1-201ENST00000325083 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
PCM1-201ENST00000325083 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
PCM1-201ENST00000325083 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
PCM1-201ENST00000325083 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
PCM1-201ENST00000325083 SSBP05455 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCM1-201ENST00000325083 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
PCM1-201ENST00000325083 ME1P48163 572 aa16.72■□□□□ 0.27
PCM1-201ENST00000325083 MTERF4Q7Z6M4 381 aaKnown RBP16.72■□□□□ 0.27
PCM1-201ENST00000325083 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
PCM1-201ENST00000325083 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
PCM1-201ENST00000325083 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
PCM1-201ENST00000325083 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
PCM1-201ENST00000325083 CCDC112Q8NEF3 446 aa16.71■□□□□ 0.27
PCM1-201ENST00000325083 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
PCM1-201ENST00000325083 LUC7LQ9NQ29 371 aaKnown RBP16.71■□□□□ 0.27
PCM1-201ENST00000325083 DACH1Q9UI36 760 aa16.71■□□□□ 0.27
PCM1-201ENST00000325083 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
PCM1-201ENST00000325083 RABEP1Q15276 862 aa16.7■□□□□ 0.26
PCM1-201ENST00000325083 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
PCM1-201ENST00000325083 HIP1O00291 1037 aa16.69■□□□□ 0.26
PCM1-201ENST00000325083 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
PCM1-201ENST00000325083 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
PCM1-201ENST00000325083 GOLGA6L10A0A0M3HER8 536 aa16.69■□□□□ 0.26
PCM1-201ENST00000325083 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCM1-201ENST00000325083 ZNF76P36508 570 aa16.69■□□□□ 0.26
PCM1-201ENST00000325083 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
PCM1-201ENST00000325083 CCDC102AQ96A19 550 aa16.68■□□□□ 0.26
PCM1-201ENST00000325083 UQCRHLA0A096LP55 91 aa16.68■□□□□ 0.26
PCM1-201ENST00000325083 UQCRHP07919 91 aa16.68■□□□□ 0.26
PCM1-201ENST00000325083 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
PCM1-201ENST00000325083 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
PCM1-201ENST00000325083 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
PCM1-201ENST00000325083 WASHC2AQ641Q2 1341 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 MYL6BP14649 208 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
PCM1-201ENST00000325083 USP5P45974 858 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
PCM1-201ENST00000325083 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 DYDC1Q8WWB3 177 aa16.67■□□□□ 0.26
PCM1-201ENST00000325083 NF2P35240 595 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 INCENPQ9NQS7 918 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 DESP17661 470 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 TRIM22Q8IYM9 498 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCM1-201ENST00000325083 MBD3O95983 291 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
PCM1-201ENST00000325083 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
PCM1-201ENST00000325083 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms