RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 MTMR7Q9Y216 660 aa21.1■□□□□ 0.97
VPS37A-201ENST00000324849 HIP1O00291 1037 aa21.1■□□□□ 0.97
VPS37A-201ENST00000324849 SASS6Q6UVJ0 657 aa21.1■□□□□ 0.97
VPS37A-201ENST00000324849 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
VPS37A-201ENST00000324849 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
VPS37A-201ENST00000324849 CCDC158Q5M9N0 1113 aa21.08■□□□□ 0.97
VPS37A-201ENST00000324849 C22orf23Q9BZE7 217 aa21.08■□□□□ 0.96
VPS37A-201ENST00000324849 DNAJC2Q99543 621 aaKnown RBP21.08■□□□□ 0.96
VPS37A-201ENST00000324849 EXOSC9Q06265 439 aaKnown RBP21.07■□□□□ 0.96
VPS37A-201ENST00000324849 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
VPS37A-201ENST00000324849 GNAI2P04899 355 aa21.07■□□□□ 0.96
VPS37A-201ENST00000324849 GPS2Q13227 327 aa21.06■□□□□ 0.96
VPS37A-201ENST00000324849 FOSBP53539 338 aa21.06■□□□□ 0.96
VPS37A-201ENST00000324849 CT47A1Q5JQC4 288 aaPredicted RBP21.06■□□□□ 0.96
VPS37A-201ENST00000324849 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.06■□□□□ 0.96
VPS37A-201ENST00000324849 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
VPS37A-201ENST00000324849 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
VPS37A-201ENST00000324849 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
VPS37A-201ENST00000324849 OFD1O75665 1012 aa21.04■□□□□ 0.96
VPS37A-201ENST00000324849 SLC4A2P04920 1241 aa21.04■□□□□ 0.96
VPS37A-201ENST00000324849 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
VPS37A-201ENST00000324849 TNNT3P45378 269 aaPredicted RBP21.04■□□□□ 0.96
VPS37A-201ENST00000324849 SDF4Q9BRK5 362 aa21.04■□□□□ 0.96
VPS37A-201ENST00000324849 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
VPS37A-201ENST00000324849 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.04■□□□□ 0.96
VPS37A-201ENST00000324849 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
VPS37A-201ENST00000324849 HOMER1Q86YM7 354 aa21.03■□□□□ 0.96
VPS37A-201ENST00000324849 SRCIN1Q9C0H9 1055 aa21.03■□□□□ 0.96
VPS37A-201ENST00000324849 ODF2Q5BJF6 829 aa21.03■□□□□ 0.96
VPS37A-201ENST00000324849 CCT4P50991 539 aaKnown RBP21.02■□□□□ 0.95
VPS37A-201ENST00000324849 TTC39AQ5SRH9 613 aa21.02■□□□□ 0.95
VPS37A-201ENST00000324849 NACAP1Q9BZK3 213 aa21.02■□□□□ 0.95
VPS37A-201ENST00000324849 PDCP20941 246 aa21.01■□□□□ 0.95
VPS37A-201ENST00000324849 PIP4K2BP78356 416 aa21.01■□□□□ 0.95
VPS37A-201ENST00000324849 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
VPS37A-201ENST00000324849 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
VPS37A-201ENST00000324849 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
VPS37A-201ENST00000324849 EPS15P42566 896 aa21■□□□□ 0.95
VPS37A-201ENST00000324849 OLFM4Q6UX06 510 aa21■□□□□ 0.95
VPS37A-201ENST00000324849 ZNF592Q92610 1267 aa21■□□□□ 0.95
VPS37A-201ENST00000324849 CCDC57Q2TAC2 916 aa21■□□□□ 0.95
VPS37A-201ENST00000324849 ATAD2Q6PL18 1390 aa20.99■□□□□ 0.95
VPS37A-201ENST00000324849 CCDC61Q9Y6R9 512 aa20.99■□□□□ 0.95
VPS37A-201ENST00000324849 ATP2B1P20020 1258 aa20.99■□□□□ 0.95
VPS37A-201ENST00000324849 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
VPS37A-201ENST00000324849 NAT10Q9H0A0 1025 aaKnown RBP20.98■□□□□ 0.95
VPS37A-201ENST00000324849 KIF21BO75037 1637 aa20.98■□□□□ 0.95
VPS37A-201ENST00000324849 MCM2P49736 904 aa20.98■□□□□ 0.95
VPS37A-201ENST00000324849 GSE1Q14687 1217 aa20.98■□□□□ 0.95
VPS37A-201ENST00000324849 NAP1L1P55209 391 aaKnown RBP20.97■□□□□ 0.95
VPS37A-201ENST00000324849 WWC2Q6AWC2 1192 aa20.97■□□□□ 0.95
VPS37A-201ENST00000324849 CFTRP13569 1480 aa20.97■□□□□ 0.95
VPS37A-201ENST00000324849 TXLNAP40222 546 aa20.97■□□□□ 0.95
VPS37A-201ENST00000324849 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
VPS37A-201ENST00000324849 PDE3AQ14432 1141 aa20.96■□□□□ 0.95
VPS37A-201ENST00000324849 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
VPS37A-201ENST00000324849 ATP2B2Q01814 1243 aa20.96■□□□□ 0.95
VPS37A-201ENST00000324849 CDK5RAP3Q96JB5 506 aa20.96■□□□□ 0.95
VPS37A-201ENST00000324849 CT47B1P0C2W7 299 aaPredicted RBP20.96■□□□□ 0.95
VPS37A-201ENST00000324849 ZC3H6P61129 1189 aaKnown RBP20.96■□□□□ 0.95
VPS37A-201ENST00000324849 TMEM132AQ24JP5 1023 aa20.96■□□□□ 0.95
VPS37A-201ENST00000324849 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
VPS37A-201ENST00000324849 NEK4P51957 841 aa20.95■□□□□ 0.94
VPS37A-201ENST00000324849 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
VPS37A-201ENST00000324849 MYL6BP14649 208 aa20.94■□□□□ 0.94
VPS37A-201ENST00000324849 TSR2Q969E8 191 aaKnown RBP20.93■□□□□ 0.94
VPS37A-201ENST00000324849 ZFYVE27Q5T4F4 411 aa20.93■□□□□ 0.94
VPS37A-201ENST00000324849 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
VPS37A-201ENST00000324849 WDR63Q8IWG1 891 aa20.92■□□□□ 0.94
VPS37A-201ENST00000324849 TRIM22Q8IYM9 498 aa20.92■□□□□ 0.94
VPS37A-201ENST00000324849 STARD3NLO95772 234 aa20.92■□□□□ 0.94
VPS37A-201ENST00000324849 XPCQ01831 940 aaPredicted RBP20.92■□□□□ 0.94
VPS37A-201ENST00000324849 SIL1Q9H173 461 aa20.92■□□□□ 0.94
VPS37A-201ENST00000324849 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
VPS37A-201ENST00000324849 KINO60870 393 aaKnown RBP20.91■□□□□ 0.94
VPS37A-201ENST00000324849 RBM5P52756 815 aaKnown RBP eCLIP20.91■□□□□ 0.94
VPS37A-201ENST00000324849 LRRCC1Q9C099 1032 aa20.91■□□□□ 0.94
VPS37A-201ENST00000324849 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
VPS37A-201ENST00000324849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.91■□□□□ 0.94
VPS37A-201ENST00000324849 NUDT16Q96DE0 195 aaKnown RBP20.9■□□□□ 0.94
VPS37A-201ENST00000324849 KRT18P05783 430 aaKnown RBP20.9■□□□□ 0.94
VPS37A-201ENST00000324849 CCDC173Q0VFZ6 552 aa20.9■□□□□ 0.94
VPS37A-201ENST00000324849 KDM4AO75164 1064 aa20.9■□□□□ 0.94
VPS37A-201ENST00000324849 JMYQ8N9B5 988 aa20.9■□□□□ 0.94
VPS37A-201ENST00000324849 FCHSD2O94868 740 aa20.9■□□□□ 0.94
VPS37A-201ENST00000324849 ERBINQ96RT1 1412 aa20.9■□□□□ 0.94
VPS37A-201ENST00000324849 C1orf115Q9H7X2 142 aa20.89■□□□□ 0.94
VPS37A-201ENST00000324849 NESP48681 1621 aa20.89■□□□□ 0.93
VPS37A-201ENST00000324849 RRS1Q15050 365 aaKnown RBP20.89■□□□□ 0.93
VPS37A-201ENST00000324849 RABEP1Q15276 862 aa20.89■□□□□ 0.93
VPS37A-201ENST00000324849 CDR1P51861 262 aa20.88■□□□□ 0.93
VPS37A-201ENST00000324849 ZNF428Q96B54 188 aa20.88■□□□□ 0.93
VPS37A-201ENST00000324849 ZNF396Q96N95 335 aaPredicted RBP20.88■□□□□ 0.93
VPS37A-201ENST00000324849 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
VPS37A-201ENST00000324849 RDXP35241 583 aaKnown RBP20.87■□□□□ 0.93
VPS37A-201ENST00000324849 STK38Q15208 465 aa20.87■□□□□ 0.93
VPS37A-201ENST00000324849 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
VPS37A-201ENST00000324849 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
VPS37A-201ENST00000324849 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
VPS37A-201ENST00000324849 ANKRD1Q15327 319 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms