RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 BRD4O60885 1362 aaPredicted RBP27.9■■■□□ 2.06
HIGD1A-201ENST00000321331 PLEKHG5O94827 1062 aa27.9■■■□□ 2.06
HIGD1A-201ENST00000321331 CABLES1Q8TDN4 633 aa27.9■■■□□ 2.06
HIGD1A-201ENST00000321331 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
HIGD1A-201ENST00000321331 PUS7Q96PZ0 661 aaKnown RBP27.88■■■□□ 2.05
HIGD1A-201ENST00000321331 ABCA3Q99758 1704 aa27.86■■■□□ 2.05
HIGD1A-201ENST00000321331 USP6P35125 1406 aa27.86■■■□□ 2.05
HIGD1A-201ENST00000321331 ZNF692Q9BU19 519 aaPredicted RBP27.86■■■□□ 2.05
HIGD1A-201ENST00000321331 FNBP4Q8N3X1 1017 aaPredicted RBP27.85■■■□□ 2.05
HIGD1A-201ENST00000321331 ABTB2Q8N961 1025 aa27.85■■■□□ 2.05
HIGD1A-201ENST00000321331 TMF1P82094 1093 aa27.84■■■□□ 2.05
HIGD1A-201ENST00000321331 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
HIGD1A-201ENST00000321331 USP21Q9UK80 565 aa27.83■■■□□ 2.05
HIGD1A-201ENST00000321331 AKAP12Q02952 1782 aa27.8■■■□□ 2.04
HIGD1A-201ENST00000321331 NUTM2GQ5VZR2 741 aa27.8■■■□□ 2.04
HIGD1A-201ENST00000321331 CPSF1Q10570 1443 aaKnown RBP27.79■■■□□ 2.04
HIGD1A-201ENST00000321331 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
HIGD1A-201ENST00000321331 KTN1Q86UP2 1357 aaKnown RBP27.78■■■□□ 2.04
HIGD1A-201ENST00000321331 RXRBP28702 533 aa27.78■■■□□ 2.04
HIGD1A-201ENST00000321331 NLRP13Q86W25 1043 aa27.78■■■□□ 2.04
HIGD1A-201ENST00000321331 CRYBG1Q9Y4K1 1723 aa27.78■■■□□ 2.04
HIGD1A-201ENST00000321331 NINLQ9Y2I6 1382 aa27.77■■■□□ 2.04
HIGD1A-201ENST00000321331 CDCA8Q53HL2 280 aa27.77■■■□□ 2.04
HIGD1A-201ENST00000321331 SSH2Q76I76 1423 aa27.77■■■□□ 2.04
HIGD1A-201ENST00000321331 HDGFL2Q7Z4V5 671 aaPredicted RBP27.76■■■□□ 2.03
HIGD1A-201ENST00000321331 SLC12A5Q9H2X9 1139 aa27.76■■■□□ 2.03
HIGD1A-201ENST00000321331 TRPC5Q9UL62 973 aaPredicted RBP27.76■■■□□ 2.03
HIGD1A-201ENST00000321331 EIF4G2P78344 907 aaKnown RBP eCLIP27.75■■■□□ 2.03
HIGD1A-201ENST00000321331 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
HIGD1A-201ENST00000321331 PHRF1Q9P1Y6 1649 aaKnown RBP27.75■■■□□ 2.03
HIGD1A-201ENST00000321331 SLIT2O94813 1529 aa27.75■■■□□ 2.03
HIGD1A-201ENST00000321331 SOCS7O14512 581 aa27.74■■■□□ 2.03
HIGD1A-201ENST00000321331 BCL9LQ86UU0 1499 aa27.74■■■□□ 2.03
HIGD1A-201ENST00000321331 TTC21BQ7Z4L5 1316 aa27.74■■■□□ 2.03
HIGD1A-201ENST00000321331 TTC21AQ8NDW8 1320 aa27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 MON2Q7Z3U7 1717 aa27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 NLRP6P59044 892 aa27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 RBM6P78332 1123 aaKnown RBP27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 UNC5CLQ8IV45 518 aa27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 CD163L1Q9NR16 1453 aa27.73■■■□□ 2.03
HIGD1A-201ENST00000321331 FAM83GA6ND36 823 aa27.72■■■□□ 2.03
HIGD1A-201ENST00000321331 USP19O94966 1318 aa27.71■■■□□ 2.03
HIGD1A-201ENST00000321331 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.71■■■□□ 2.03
HIGD1A-201ENST00000321331 PRDM11Q9NQV5 511 aa27.71■■■□□ 2.03
HIGD1A-201ENST00000321331 NRKQ7Z2Y5 1582 aa27.71■■■□□ 2.03
HIGD1A-201ENST00000321331 PLCH1Q4KWH8 1693 aa27.7■■■□□ 2.03
HIGD1A-201ENST00000321331 NWD2Q9ULI1 1742 aa27.7■■■□□ 2.03
HIGD1A-201ENST00000321331 ATRNO75882 1429 aa27.7■■■□□ 2.03
HIGD1A-201ENST00000321331 COL14A1Q05707 1796 aaKnown RBP27.7■■■□□ 2.02
HIGD1A-201ENST00000321331 PIK3C2AO00443 1686 aa27.69■■■□□ 2.02
HIGD1A-201ENST00000321331 A0A1W2PP64 1363 aa27.69■■■□□ 2.02
HIGD1A-201ENST00000321331 KIAA0232Q92628 1395 aa27.68■■■□□ 2.02
HIGD1A-201ENST00000321331 HSPA5P11021 654 aaKnown RBP27.67■■■□□ 2.02
HIGD1A-201ENST00000321331 ZC3H6P61129 1189 aaKnown RBP27.67■■■□□ 2.02
HIGD1A-201ENST00000321331 CDK12Q9NYV4 1490 aaPredicted RBP27.67■■■□□ 2.02
HIGD1A-201ENST00000321331 EDC4Q6P2E9 1401 aaKnown RBP27.66■■■□□ 2.02
HIGD1A-201ENST00000321331 GCP02774 474 aa27.66■■■□□ 2.02
HIGD1A-201ENST00000321331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
HIGD1A-201ENST00000321331 BTG4Q9NY30 223 aa27.65■■■□□ 2.02
HIGD1A-201ENST00000321331 GJD4Q96KN9 370 aaPredicted RBP27.63■■■□□ 2.01
HIGD1A-201ENST00000321331 SLIT3O75094 1523 aa27.63■■■□□ 2.01
HIGD1A-201ENST00000321331 CPDO75976 1380 aa27.63■■■□□ 2.01
HIGD1A-201ENST00000321331 ANKRD36BQ8N2N9 1353 aa27.63■■■□□ 2.01
HIGD1A-201ENST00000321331 CHRNA2Q15822 529 aa27.61■■■□□ 2.01
HIGD1A-201ENST00000321331 VPS72Q15906 364 aa27.61■■■□□ 2.01
HIGD1A-201ENST00000321331 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
HIGD1A-201ENST00000321331 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
HIGD1A-201ENST00000321331 USP31Q70CQ4 1352 aa27.59■■■□□ 2.01
HIGD1A-201ENST00000321331 NME9Q86XW9 330 aa27.59■■■□□ 2.01
HIGD1A-201ENST00000321331 CCDC9Q9Y3X0 531 aaKnown RBP27.59■■■□□ 2.01
HIGD1A-201ENST00000321331 RGS12O14924 1447 aa27.58■■■□□ 2.01
HIGD1A-201ENST00000321331 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
HIGD1A-201ENST00000321331 USP54Q70EL1 1684 aa27.54■■■□□ 2
HIGD1A-201ENST00000321331 GLI3P10071 1580 aa27.54■■■□□ 2
HIGD1A-201ENST00000321331 ZBTB7CA1YPR0 619 aa27.54■■■□□ 2
HIGD1A-201ENST00000321331 ZRANB1Q9UGI0 708 aa27.54■■■□□ 2
HIGD1A-201ENST00000321331 MYOM1P52179 1685 aa27.53■■■□□ 2
HIGD1A-201ENST00000321331 SOX12O15370 315 aa27.53■■■□□ 2
HIGD1A-201ENST00000321331 EVA1CP58658 441 aa27.51■■□□□ 1.99
HIGD1A-201ENST00000321331 STRN4Q9NRL3 753 aa27.51■■□□□ 1.99
HIGD1A-201ENST00000321331 LMO7Q8WWI1 1683 aa27.51■■□□□ 1.99
HIGD1A-201ENST00000321331 CAMTA1Q9Y6Y1 1673 aa27.5■■□□□ 1.99
HIGD1A-201ENST00000321331 AATKQ6ZMQ8 1374 aa27.5■■□□□ 1.99
HIGD1A-201ENST00000321331 OVOS2A0A0J9YW53 1432 aa27.49■■□□□ 1.99
HIGD1A-201ENST00000321331 OVOS2Q6IE36 1432 aa27.49■■□□□ 1.99
HIGD1A-201ENST00000321331 ARHGEF25Q86VW2 580 aa27.48■■□□□ 1.99
HIGD1A-201ENST00000321331 NFAT5O94916 1531 aa27.48■■□□□ 1.99
HIGD1A-201ENST00000321331 COG3Q96JB2 828 aa27.48■■□□□ 1.99
HIGD1A-201ENST00000321331 SPATA31A5Q5VU36 1347 aa27.47■■□□□ 1.99
HIGD1A-201ENST00000321331 SPATA31A7Q8IWB4 1347 aa27.47■■□□□ 1.99
HIGD1A-201ENST00000321331 ONECUT3O60422 494 aaPredicted RBP27.44■■□□□ 1.98
HIGD1A-201ENST00000321331 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
HIGD1A-201ENST00000321331 SPATA31A1Q5TZJ5 1347 aa27.43■■□□□ 1.98
HIGD1A-201ENST00000321331 NSD3Q9BZ95 1437 aa27.43■■□□□ 1.98
HIGD1A-201ENST00000321331 COL18A1P39060 1754 aa27.42■■□□□ 1.98
HIGD1A-201ENST00000321331 C11orf95C9JLR9 678 aaPredicted RBP27.42■■□□□ 1.98
HIGD1A-201ENST00000321331 FYB1O15117 783 aa27.42■■□□□ 1.98
HIGD1A-201ENST00000321331 FAM98CQ17RN3 349 aaKnown RBP27.42■■□□□ 1.98
HIGD1A-201ENST00000321331 SEPT12Q8IYM1 358 aa27.42■■□□□ 1.98
HIGD1A-201ENST00000321331 CARD14Q9BXL6 1004 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms