RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
EDEM3-201ENST00000318130 MTHFSP49914 203 aa16.71■□□□□ 0.27
EDEM3-201ENST00000318130 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
EDEM3-201ENST00000318130 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
EDEM3-201ENST00000318130 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.26
EDEM3-201ENST00000318130 PANK1Q8TE04 598 aa16.7■□□□□ 0.26
EDEM3-201ENST00000318130 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
EDEM3-201ENST00000318130 PTCD1O75127 700 aaKnown RBP16.7■□□□□ 0.26
EDEM3-201ENST00000318130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.264e-7■■■■■ 50
EDEM3-201ENST00000318130 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
EDEM3-201ENST00000318130 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
EDEM3-201ENST00000318130 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
EDEM3-201ENST00000318130 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
EDEM3-201ENST00000318130 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
EDEM3-201ENST00000318130 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
EDEM3-201ENST00000318130 WAPLQ7Z5K2 1190 aa16.68■□□□□ 0.26
EDEM3-201ENST00000318130 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
EDEM3-201ENST00000318130 API5Q9BZZ5 524 aaKnown RBP16.67■□□□□ 0.26
EDEM3-201ENST00000318130 CPLX2Q6PUV4 134 aaKnown RBP16.66■□□□□ 0.26
EDEM3-201ENST00000318130 SULT6B1Q6IMI4 303 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
EDEM3-201ENST00000318130 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
EDEM3-201ENST00000318130 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
EDEM3-201ENST00000318130 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
EDEM3-201ENST00000318130 ZNF530Q6P9A1 599 aaPredicted RBP16.65■□□□□ 0.26
EDEM3-201ENST00000318130 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
EDEM3-201ENST00000318130 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.26
EDEM3-201ENST00000318130 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.26
EDEM3-201ENST00000318130 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.26
EDEM3-201ENST00000318130 CDC45O75419 566 aa16.64■□□□□ 0.25
EDEM3-201ENST00000318130 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
EDEM3-201ENST00000318130 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 WDR78Q5VTH9 848 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 CNTLNQ9NXG0 1405 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 ACBD3Q9H3P7 528 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 CCDC173Q0VFZ6 552 aa16.63■□□□□ 0.25
EDEM3-201ENST00000318130 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
EDEM3-201ENST00000318130 AK7Q96M32 723 aa16.62■□□□□ 0.25
EDEM3-201ENST00000318130 HOOK1Q9UJC3 728 aaKnown RBP16.62■□□□□ 0.25
EDEM3-201ENST00000318130 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
EDEM3-201ENST00000318130 WDR70Q9NW82 654 aa16.62■□□□□ 0.25
EDEM3-201ENST00000318130 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
EDEM3-201ENST00000318130 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 ZPR1O75312 459 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
EDEM3-201ENST00000318130 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
EDEM3-201ENST00000318130 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 FKBP4Q02790 459 aaKnown RBP eCLIP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 CALRP27797 417 aaKnown RBP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 MPHOSPH8Q99549 860 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 NAP1L1P55209 391 aaKnown RBP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
EDEM3-201ENST00000318130 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
EDEM3-201ENST00000318130 FOXO3O43524 673 aa16.59■□□□□ 0.25
EDEM3-201ENST00000318130 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
EDEM3-201ENST00000318130 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
EDEM3-201ENST00000318130 ANKIB1Q9P2G1 1089 aa16.59■□□□□ 0.25
EDEM3-201ENST00000318130 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
EDEM3-201ENST00000318130 PDILTQ8N807 584 aa16.58■□□□□ 0.25
EDEM3-201ENST00000318130 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.25
EDEM3-201ENST00000318130 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.25
EDEM3-201ENST00000318130 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 AAMPQ13685 434 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 MBD3O95983 291 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
EDEM3-201ENST00000318130 WWC2Q6AWC2 1192 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 STK3Q13188 491 aa16.58■□□□□ 0.24
EDEM3-201ENST00000318130 HMGN5P82970 282 aaKnown RBP16.57■□□□□ 0.24
EDEM3-201ENST00000318130 IGF1RP08069 1367 aa16.57■□□□□ 0.24
EDEM3-201ENST00000318130 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
EDEM3-201ENST00000318130 HSPA2P54652 639 aa16.57■□□□□ 0.24
EDEM3-201ENST00000318130 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
EDEM3-201ENST00000318130 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
EDEM3-201ENST00000318130 PPM1FP49593 454 aaPredicted RBP16.57■□□□□ 0.24
EDEM3-201ENST00000318130 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
EDEM3-201ENST00000318130 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
EDEM3-201ENST00000318130 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
EDEM3-201ENST00000318130 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 RTEL1-TNFRSF6BF6WH68 1400 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 TRMT1LQ7Z2T5 733 aaKnown RBP16.56■□□□□ 0.24
EDEM3-201ENST00000318130 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms