RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 KCNQ2O43526 872 aa6.18□□□□□ -1.42
POLR2B-201ENST00000314595 AKAP12Q02952 1782 aa6.18□□□□□ -1.42
POLR2B-201ENST00000314595 USP54Q70EL1 1684 aa6.18□□□□□ -1.42
POLR2B-201ENST00000314595 QRICH2Q9H0J4 1663 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 DCAF8L1A6NGE4 600 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 BARGINQ6ZT62 677 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 TSHZ2Q9NRE2 1034 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 ARHGEF28Q8N1W1 1705 aaKnown RBP6.17□□□□□ -1.42
POLR2B-201ENST00000314595 C14orf37Q86TY3 774 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 ADCY9O60503 1353 aa6.17□□□□□ -1.42
POLR2B-201ENST00000314595 SPON1Q9HCB6 807 aa6.16□□□□□ -1.42
POLR2B-201ENST00000314595 ADAMTS2O95450 1211 aa6.16□□□□□ -1.42
POLR2B-201ENST00000314595 FAM196AQ6ZSG2 479 aa6.16□□□□□ -1.42
POLR2B-201ENST00000314595 DHX57Q6P158 1386 aaKnown RBP6.16□□□□□ -1.42
POLR2B-201ENST00000314595 SGIP1Q9BQI5 828 aa6.15□□□□□ -1.42
POLR2B-201ENST00000314595 BRD4O60885 1362 aaPredicted RBP6.15□□□□□ -1.42
POLR2B-201ENST00000314595 EIF3AQ14152 1382 aaKnown RBP6.15□□□□□ -1.43
POLR2B-201ENST00000314595 PLSCR1O15162 318 aa6.15□□□□□ -1.43
POLR2B-201ENST00000314595 CPDO75976 1380 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 TULP4Q9NRJ4 1543 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 ZNF316A6NFI3 1004 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-201ENST00000314595 PIK3C2GO75747 1445 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 COL18A1P39060 1754 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 WDR90Q96KV7 1748 aa6.14□□□□□ -1.43
POLR2B-201ENST00000314595 R3HDM1Q15032 1099 aaKnown RBP6.13□□□□□ -1.43
POLR2B-201ENST00000314595 NBPF8Q3BBV2 869 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 NBPF14Q5TI25 921 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 THRAP3Q9Y2W1 955 aaKnown RBP6.13□□□□□ -1.43
POLR2B-201ENST00000314595 SUPT16HQ9Y5B9 1047 aaKnown RBP6.13□□□□□ -1.43
POLR2B-201ENST00000314595 C10orf71Q711Q0 1435 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 PTGER2P43116 358 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 SPATA31A1Q5TZJ5 1347 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 SENP3-EIF4A1A0A087X0R7 540 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 PSME1Q06323 249 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 RRP7BPQ9NSQ0 103 aa6.13□□□□□ -1.43
POLR2B-201ENST00000314595 PSDA5PKW4 1024 aaPredicted RBP6.12□□□□□ -1.43
POLR2B-201ENST00000314595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.12□□□□□ -1.431e-6■■□□□ 13.9
POLR2B-201ENST00000314595 PIK3C2AO00443 1686 aa6.12□□□□□ -1.43
POLR2B-201ENST00000314595 DDX17Q92841 729 aaKnown RBP6.12□□□□□ -1.43
POLR2B-201ENST00000314595 TUBGCP6Q96RT7 1819 aa6.12□□□□□ -1.43
POLR2B-201ENST00000314595 SLIT3O75094 1523 aa6.12□□□□□ -1.43
POLR2B-201ENST00000314595 EN1Q05925 392 aaPredicted RBP6.11□□□□□ -1.43
POLR2B-201ENST00000314595 EZH2Q15910 746 aaKnown RBP6.11□□□□□ -1.43
POLR2B-201ENST00000314595 LY75O60449 1722 aa6.11□□□□□ -1.43
POLR2B-201ENST00000314595 OVOS2A0A0G2JMS6 1433 aa6.11□□□□□ -1.43
POLR2B-201ENST00000314595 OVOS2A0A0J9YW53 1432 aa6.11□□□□□ -1.43
POLR2B-201ENST00000314595 OVOS2Q6IE36 1432 aa6.11□□□□□ -1.43
POLR2B-201ENST00000314595 VGFO15240 615 aaPredicted RBP6.11□□□□□ -1.43
POLR2B-201ENST00000314595 SPATA31E1Q6ZUB1 1445 aa6.1□□□□□ -1.43
POLR2B-201ENST00000314595 KIF13BQ9NQT8 1826 aa6.1□□□□□ -1.43
POLR2B-201ENST00000314595 SSH2Q76I76 1423 aa6.1□□□□□ -1.43
POLR2B-201ENST00000314595 ANKRD30BQ9BXX2 1392 aa6.1□□□□□ -1.43
POLR2B-201ENST00000314595 BCANQ96GW7 911 aa6.1□□□□□ -1.43
POLR2B-201ENST00000314595 ADGRB1O14514 1584 aa6.09□□□□□ -1.43
POLR2B-201ENST00000314595 FAM83GA6ND36 823 aa6.09□□□□□ -1.44
POLR2B-201ENST00000314595 GIGYF1O75420 1035 aaPredicted RBP6.09□□□□□ -1.44
POLR2B-201ENST00000314595 KIAA1210Q9ULL0 1709 aa6.08□□□□□ -1.44
POLR2B-201ENST00000314595 YTHDC2Q9H6S0 1430 aaKnown RBP6.08□□□□□ -1.44
POLR2B-201ENST00000314595 FAM208AQ9UK61 1670 aaKnown RBP6.08□□□□□ -1.44
POLR2B-201ENST00000314595 PRELPP51888 382 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 KRT28Q7Z3Y7 464 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 HSPA6P17066 643 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 MIER1Q8N108 512 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 JMYQ8N9B5 988 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 USP19O94966 1318 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 KIAA1551Q9HCM1 1747 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 POLR3AO14802 1390 aaPredicted RBP6.07□□□□□ -1.44
POLR2B-201ENST00000314595 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
POLR2B-201ENST00000314595 COL5A2P05997 1499 aaPredicted RBP6.06□□□□□ -1.44
POLR2B-201ENST00000314595 TNRC6CQ9HCJ0 1690 aaKnown RBP6.06□□□□□ -1.44
POLR2B-201ENST00000314595 KANK4Q5T7N3 995 aaPredicted RBP6.05□□□□□ -1.44
POLR2B-201ENST00000314595 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
POLR2B-201ENST00000314595 BTAF1O14981 1849 aa6.05□□□□□ -1.44
POLR2B-201ENST00000314595 PXDNLA1KZ92 1463 aa6.05□□□□□ -1.44
POLR2B-201ENST00000314595 SLC16A10Q8TF71 515 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 SYT17Q9BSW7 474 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 BCL11BQ9C0K0 894 aaPredicted RBP6.04□□□□□ -1.44
POLR2B-201ENST00000314595 CRB1P82279 1406 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 PHF8Q9UPP1 1060 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 ZNF831Q5JPB2 1677 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
POLR2B-201ENST00000314595 CDCA7Q9BWT1 371 aaPredicted RBP6.04□□□□□ -1.44
POLR2B-201ENST00000314595 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
POLR2B-201ENST00000314595 FANCIQ9NVI1 1328 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 NUP155O75694 1391 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 PKD1L3Q7Z443 1732 aa6.04□□□□□ -1.44
POLR2B-201ENST00000314595 APBA3O96018 575 aa6.03□□□□□ -1.44
POLR2B-201ENST00000314595 KIAA0232Q92628 1395 aa6.03□□□□□ -1.44
POLR2B-201ENST00000314595 APLP1P51693 650 aa6.03□□□□□ -1.44
POLR2B-201ENST00000314595 FOXO3O43524 673 aa6.03□□□□□ -1.44
POLR2B-201ENST00000314595 DNAJC5GQ8N7S2 189 aa6.03□□□□□ -1.44
POLR2B-201ENST00000314595 TNS2Q63HR2 1409 aa6.02□□□□□ -1.45
POLR2B-201ENST00000314595 ATP10DQ9P241 1426 aa6.02□□□□□ -1.45
POLR2B-201ENST00000314595 BTG4Q9NY30 223 aa6.02□□□□□ -1.45
POLR2B-201ENST00000314595 BRCA1P38398 1863 aaKnown RBP6.02□□□□□ -1.45
POLR2B-201ENST00000314595 MSH5O43196 834 aa6.02□□□□□ -1.45
POLR2B-201ENST00000314595 GRIN3BO60391 1043 aa6.02□□□□□ -1.45
POLR2B-201ENST00000314595 ERICH6Q7L0X2 663 aa6.01□□□□□ -1.45
POLR2B-201ENST00000314595 SRCAPQ6ZRS2 3230 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms