RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NKTRP30414 1462 aaKnown RBP25.51■■□□□ 1.67
HOXC4-201ENST00000303406 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
HOXC4-201ENST00000303406 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
HOXC4-201ENST00000303406 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
HOXC4-201ENST00000303406 B4GALNT3Q6L9W6 998 aa25.49■■□□□ 1.67
HOXC4-201ENST00000303406 AATKQ6ZMQ8 1374 aa25.48■■□□□ 1.67
HOXC4-201ENST00000303406 WDR63Q8IWG1 891 aa25.47■■□□□ 1.67
HOXC4-201ENST00000303406 WWC1Q8IX03 1113 aa25.47■■□□□ 1.67
HOXC4-201ENST00000303406 TCP11L2Q8N4U5 519 aa25.46■■□□□ 1.67
HOXC4-201ENST00000303406 NRKQ7Z2Y5 1582 aa25.46■■□□□ 1.67
HOXC4-201ENST00000303406 PRR36Q9H6K5 1346 aa25.45■■□□□ 1.67
HOXC4-201ENST00000303406 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
HOXC4-201ENST00000303406 CCDC136Q96JN2 1154 aa25.44■■□□□ 1.66
HOXC4-201ENST00000303406 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
HOXC4-201ENST00000303406 PNNQ9H307 717 aaKnown RBP25.43■■□□□ 1.66
HOXC4-201ENST00000303406 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
HOXC4-201ENST00000303406 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.42■■□□□ 1.66
HOXC4-201ENST00000303406 CDK12Q9NYV4 1490 aaPredicted RBP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 DIAPH1O60610 1272 aaKnown RBP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.41■■□□□ 1.66
HOXC4-201ENST00000303406 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
HOXC4-201ENST00000303406 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
HOXC4-201ENST00000303406 MAP2P11137 1827 aaKnown RBP25.39■■□□□ 1.65
HOXC4-201ENST00000303406 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
HOXC4-201ENST00000303406 POLKQ9UBT6 870 aa25.38■■□□□ 1.65
HOXC4-201ENST00000303406 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
HOXC4-201ENST00000303406 SETD1BQ9UPS6 1966 aaKnown RBP25.37■■□□□ 1.65
HOXC4-201ENST00000303406 COG3Q96JB2 828 aa25.36■■□□□ 1.65
HOXC4-201ENST00000303406 USP6P35125 1406 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 PLPPR3Q6T4P5 718 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 NME9Q86XW9 330 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
HOXC4-201ENST00000303406 U2SURPO15042 1029 aaKnown RBP25.33■■□□□ 1.65
HOXC4-201ENST00000303406 SSH2Q76I76 1423 aa25.33■■□□□ 1.65
HOXC4-201ENST00000303406 NCKAP5LQ9HCH0 1330 aa25.33■■□□□ 1.64
HOXC4-201ENST00000303406 FCHSD2O94868 740 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 OVOS2A0A0J9YW53 1432 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 OVOS2Q6IE36 1432 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 ACEP12821 1306 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 MAPK8IP3Q9UPT6 1336 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 ANKLE2Q86XL3 938 aa25.32■■□□□ 1.64
HOXC4-201ENST00000303406 CHD2O14647 1828 aaKnown RBP25.31■■□□□ 1.64
HOXC4-201ENST00000303406 PLIN1O60240 522 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 MYH16Q9H6N6 1097 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 RRP7AQ9Y3A4 280 aaKnown RBP25.3■■□□□ 1.64
HOXC4-201ENST00000303406 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
HOXC4-201ENST00000303406 IL16Q14005 1332 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
HOXC4-201ENST00000303406 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 TTC21AQ8NDW8 1320 aa25.29■■□□□ 1.64
HOXC4-201ENST00000303406 NEUROD2Q15784 382 aa25.27■■□□□ 1.64
HOXC4-201ENST00000303406 CT47B1P0C2W7 299 aaPredicted RBP25.27■■□□□ 1.64
HOXC4-201ENST00000303406 USP31Q70CQ4 1352 aa25.27■■□□□ 1.64
HOXC4-201ENST00000303406 IL13P35225 146 aa25.25■■□□□ 1.63
HOXC4-201ENST00000303406 RSPH6AQ9H0K4 717 aa25.25■■□□□ 1.63
HOXC4-201ENST00000303406 RBM19Q9Y4C8 960 aaKnown RBP25.24■■□□□ 1.63
HOXC4-201ENST00000303406 KCNA6P17658 529 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 ZRANB1Q9UGI0 708 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
HOXC4-201ENST00000303406 TRIM35Q9UPQ4 493 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 USP54Q70EL1 1684 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 NEFMP07197 916 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 PDE3AQ14432 1141 aa25.22■■□□□ 1.63
HOXC4-201ENST00000303406 C20orf194Q5TEA3 1177 aa25.21■■□□□ 1.63
HOXC4-201ENST00000303406 RGPD8O14715 1765 aaPredicted RBP25.2■■□□□ 1.62
HOXC4-201ENST00000303406 PPM1GO15355 546 aaPredicted RBP25.18■■□□□ 1.62
HOXC4-201ENST00000303406 NPHP4O75161 1426 aaPredicted RBP25.18■■□□□ 1.62
HOXC4-201ENST00000303406 BCAR3O75815 825 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 FBLN1P23142 703 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 RARSP54136 660 aaKnown RBP25.17■■□□□ 1.62
HOXC4-201ENST00000303406 RIPK4P57078 832 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 PRKAR2BP31323 418 aa25.17■■□□□ 1.62
HOXC4-201ENST00000303406 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
HOXC4-201ENST00000303406 NFE2L2Q16236 605 aa25.15■■□□□ 1.62
HOXC4-201ENST00000303406 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.62
HOXC4-201ENST00000303406 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 AAMPQ13685 434 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 RRS1Q15050 365 aaKnown RBP25.13■■□□□ 1.61
HOXC4-201ENST00000303406 NGDNQ8NEJ9 315 aaKnown RBP25.13■■□□□ 1.61
HOXC4-201ENST00000303406 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 ADGRL3Q9HAR2 1447 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 RGPD1P0DJD0 1748 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 PEAK1Q9H792 1746 aa25.13■■□□□ 1.61
HOXC4-201ENST00000303406 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
HOXC4-201ENST00000303406 KDM2BQ8NHM5 1336 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
HOXC4-201ENST00000303406 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 PMFBP1Q8TBY8 1022 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
HOXC4-201ENST00000303406 CENPQQ7L2Z9 268 aaPredicted RBP25.09■■□□□ 1.61
HOXC4-201ENST00000303406 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
HOXC4-201ENST00000303406 HMOX1P09601 288 aa25.07■■□□□ 1.6
HOXC4-201ENST00000303406 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
HOXC4-201ENST00000303406 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms