RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
COL6A2-201ENST00000300527 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
COL6A2-201ENST00000300527 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
COL6A2-201ENST00000300527 DDIT3P35638 169 aa18.17■□□□□ 0.5
COL6A2-201ENST00000300527 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
COL6A2-201ENST00000300527 KIF2CQ99661 725 aa18.17■□□□□ 0.5
COL6A2-201ENST00000300527 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
COL6A2-201ENST00000300527 KANK1Q14678 1352 aa18.16■□□□□ 0.5
COL6A2-201ENST00000300527 MAST1Q9Y2H9 1570 aa18.16■□□□□ 0.5
COL6A2-201ENST00000300527 PTMAP06454 111 aaKnown RBP18.16■□□□□ 0.5
COL6A2-201ENST00000300527 FBLN1P23142 703 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 DUOX2Q9NRD8 1548 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
COL6A2-201ENST00000300527 UNC13BO14795 1591 aa18.14■□□□□ 0.5
COL6A2-201ENST00000300527 UQCRHLA0A096LP55 91 aa18.14■□□□□ 0.5
COL6A2-201ENST00000300527 UQCRHP07919 91 aa18.14■□□□□ 0.5
COL6A2-201ENST00000300527 RBSNQ9H1K0 784 aa18.14■□□□□ 0.5
COL6A2-201ENST00000300527 ATP10AO60312 1499 aa18.14■□□□□ 0.49
COL6A2-201ENST00000300527 OFD1O75665 1012 aa18.14■□□□□ 0.49
COL6A2-201ENST00000300527 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
COL6A2-201ENST00000300527 PTMSP20962 102 aa18.14■□□□□ 0.49
COL6A2-201ENST00000300527 BMP2KLQ5H9B9 411 aa18.14■□□□□ 0.49
COL6A2-201ENST00000300527 DNTTIP2Q5QJE6 756 aaKnown RBP18.14■□□□□ 0.49
COL6A2-201ENST00000300527 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
COL6A2-201ENST00000300527 KLHL40Q2TBA0 621 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 IQGAP3Q86VI3 1631 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 KIF16BQ96L93 1317 aa18.13■□□□□ 0.49
COL6A2-201ENST00000300527 RNF17Q9BXT8 1623 aaKnown RBP18.13■□□□□ 0.49
COL6A2-201ENST00000300527 PTPRTO14522 1441 aa18.12■□□□□ 0.49
COL6A2-201ENST00000300527 TTC37Q6PGP7 1564 aa18.12■□□□□ 0.49
COL6A2-201ENST00000300527 HMOX1P09601 288 aa18.12■□□□□ 0.49
COL6A2-201ENST00000300527 STAC3Q96MF2 364 aa18.11■□□□□ 0.49
COL6A2-201ENST00000300527 GGT6Q6P531 493 aa18.11■□□□□ 0.49
COL6A2-201ENST00000300527 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
COL6A2-201ENST00000300527 CDC45O75419 566 aa18.11■□□□□ 0.49
COL6A2-201ENST00000300527 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
COL6A2-201ENST00000300527 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
COL6A2-201ENST00000300527 MYOM1P52179 1685 aa18.1■□□□□ 0.49
COL6A2-201ENST00000300527 SYCE3A1L190 88 aa18.1■□□□□ 0.49
COL6A2-201ENST00000300527 PPP1R9BQ96SB3 815 aa18.1■□□□□ 0.49
COL6A2-201ENST00000300527 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
COL6A2-201ENST00000300527 PLXNC1O60486 1568 aa18.1■□□□□ 0.49
COL6A2-201ENST00000300527 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
COL6A2-201ENST00000300527 NOS1P29475 1434 aa18.09■□□□□ 0.49
COL6A2-201ENST00000300527 TSPYL6Q8N831 410 aa18.08■□□□□ 0.49
COL6A2-201ENST00000300527 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.48
COL6A2-201ENST00000300527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL6A2-201ENST00000300527 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
COL6A2-201ENST00000300527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL6A2-201ENST00000300527 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
COL6A2-201ENST00000300527 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
COL6A2-201ENST00000300527 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
COL6A2-201ENST00000300527 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
COL6A2-201ENST00000300527 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
COL6A2-201ENST00000300527 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-201ENST00000300527 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-201ENST00000300527 NUCB2P80303 420 aa18.06■□□□□ 0.48
COL6A2-201ENST00000300527 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-201ENST00000300527 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
COL6A2-201ENST00000300527 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
COL6A2-201ENST00000300527 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
COL6A2-201ENST00000300527 LMBRD1Q9NUN5 540 aa18.05■□□□□ 0.48
COL6A2-201ENST00000300527 TSC1Q92574 1164 aa18.04■□□□□ 0.48
COL6A2-201ENST00000300527 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-201ENST00000300527 ZBTB7BO15156 539 aaPredicted RBP18.04■□□□□ 0.48
COL6A2-201ENST00000300527 GSPT1P15170 499 aaKnown RBP18.04■□□□□ 0.48
COL6A2-201ENST00000300527 RABEP1Q15276 862 aa18.04■□□□□ 0.48
COL6A2-201ENST00000300527 SIRT2Q8IXJ6 389 aa18.03■□□□□ 0.48
COL6A2-201ENST00000300527 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
COL6A2-201ENST00000300527 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
COL6A2-201ENST00000300527 CEP152O94986 1710 aa18.03■□□□□ 0.48
COL6A2-201ENST00000300527 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
COL6A2-201ENST00000300527 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
COL6A2-201ENST00000300527 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
COL6A2-201ENST00000300527 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
COL6A2-201ENST00000300527 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
COL6A2-201ENST00000300527 GPT2Q8TD30 523 aa18.02■□□□□ 0.48
COL6A2-201ENST00000300527 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
COL6A2-201ENST00000300527 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
COL6A2-201ENST00000300527 ST18O60284 1047 aa18.01■□□□□ 0.47
COL6A2-201ENST00000300527 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
COL6A2-201ENST00000300527 TMEM63CQ9P1W3 806 aa18.01■□□□□ 0.47
COL6A2-201ENST00000300527 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
COL6A2-201ENST00000300527 TRPM2O94759 1503 aa18■□□□□ 0.47
COL6A2-201ENST00000300527 ZNF445P59923 1031 aa18■□□□□ 0.47
COL6A2-201ENST00000300527 ABCC11Q96J66 1382 aa17.99■□□□□ 0.47
COL6A2-201ENST00000300527 ZKSCAN5Q9Y2L8 839 aa17.99■□□□□ 0.47
COL6A2-201ENST00000300527 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
COL6A2-201ENST00000300527 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
COL6A2-201ENST00000300527 CASC1Q6TDU7 716 aa17.98■□□□□ 0.47
COL6A2-201ENST00000300527 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
COL6A2-201ENST00000300527 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.98■□□□□ 0.47
COL6A2-201ENST00000300527 NEK4P51957 841 aa17.97■□□□□ 0.47
COL6A2-201ENST00000300527 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms