RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
NPC1L1-201ENST00000289547 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 G3V3G9 751 aa14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 CRBNQ96SW2 442 aa14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 ZC3H6P61129 1189 aaKnown RBP14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
NPC1L1-201ENST00000289547 RPRD2Q5VT52 1461 aaKnown RBP14.04□□□□□ -0.16
NPC1L1-201ENST00000289547 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
NPC1L1-201ENST00000289547 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
NPC1L1-201ENST00000289547 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
NPC1L1-201ENST00000289547 ZNF771Q7L3S4 317 aaPredicted RBP14.03□□□□□ -0.16
NPC1L1-201ENST00000289547 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
NPC1L1-201ENST00000289547 SHROOM2Q13796 1616 aa14.03□□□□□ -0.16
NPC1L1-201ENST00000289547 UBE2Q2Q8WVN8 375 aa14.02□□□□□ -0.16
NPC1L1-201ENST00000289547 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.16
NPC1L1-201ENST00000289547 LRRC59Q96AG4 307 aaKnown RBP14.02□□□□□ -0.16
NPC1L1-201ENST00000289547 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
NPC1L1-201ENST00000289547 MCCP23508 829 aa14.02□□□□□ -0.17
NPC1L1-201ENST00000289547 CLUAP1Q96AJ1 413 aa14.02□□□□□ -0.17
NPC1L1-201ENST00000289547 MTHFSP49914 203 aa14.01□□□□□ -0.17
NPC1L1-201ENST00000289547 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
NPC1L1-201ENST00000289547 NEXNQ0ZGT2 675 aa14.01□□□□□ -0.17
NPC1L1-201ENST00000289547 CFAP44Q96MT7 982 aa14.01□□□□□ -0.17
NPC1L1-201ENST00000289547 HMOX1P09601 288 aa14.01□□□□□ -0.17
NPC1L1-201ENST00000289547 RIPK4P57078 832 aa14□□□□□ -0.17
NPC1L1-201ENST00000289547 SMC4Q9NTJ3 1288 aa14□□□□□ -0.17
NPC1L1-201ENST00000289547 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
NPC1L1-201ENST00000289547 MBD5Q9P267 1494 aa14□□□□□ -0.17
NPC1L1-201ENST00000289547 DDX58O95786 925 aaKnown RBP14□□□□□ -0.17
NPC1L1-201ENST00000289547 KCNJ4P48050 445 aa14□□□□□ -0.17
NPC1L1-201ENST00000289547 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 ITPRIPQ8IWB1 547 aa13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 CHMP5Q9NZZ3 219 aa13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 NLRP1Q9C000 1473 aa13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 APBB1O00213 710 aa13.99□□□□□ -0.17
NPC1L1-201ENST00000289547 MRE11P49959 708 aa13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 MAP7D2Q96T17 732 aa13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 FGD1P98174 961 aa13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 GNAI1P63096 354 aa13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
NPC1L1-201ENST00000289547 CABP4P57796 275 aa13.97□□□□□ -0.17
NPC1L1-201ENST00000289547 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
NPC1L1-201ENST00000289547 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
NPC1L1-201ENST00000289547 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
NPC1L1-201ENST00000289547 ABCA9Q8IUA7 1624 aa13.97□□□□□ -0.17
NPC1L1-201ENST00000289547 TPM2P07951 284 aa13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 KLHL34Q8N239 644 aa13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 ACEP12821 1306 aa13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.17
NPC1L1-201ENST00000289547 SLC4A10Q6U841 1118 aa13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 ZNF530Q6P9A1 599 aaPredicted RBP13.96□□□□□ -0.18
NPC1L1-201ENST00000289547 E9PSI1 815 aa13.95□□□□□ -0.18
NPC1L1-201ENST00000289547 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
NPC1L1-201ENST00000289547 GORABQ5T7V8 394 aa13.95□□□□□ -0.18
NPC1L1-201ENST00000289547 HMMRO75330 724 aa13.95□□□□□ -0.18
NPC1L1-201ENST00000289547 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
NPC1L1-201ENST00000289547 TRPM2O94759 1503 aa13.94□□□□□ -0.18
NPC1L1-201ENST00000289547 NPATQ14207 1427 aa13.94□□□□□ -0.18
NPC1L1-201ENST00000289547 UGGT1Q9NYU2 1555 aa13.94□□□□□ -0.18
NPC1L1-201ENST00000289547 EIF2AK4Q9P2K8 1649 aaKnown RBP13.94□□□□□ -0.18
NPC1L1-201ENST00000289547 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
NPC1L1-201ENST00000289547 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
NPC1L1-201ENST00000289547 RRS1Q15050 365 aaKnown RBP13.93□□□□□ -0.18
NPC1L1-201ENST00000289547 EXOC5O00471 708 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 EFCAB6Q5THR3 1501 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 APAF1O14727 1248 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 PHF14O94880 888 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 MTERF4Q7Z6M4 381 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 C8orf37Q96NL8 207 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 YTHDC2Q9H6S0 1430 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 GLI2P10070 1586 aa13.92□□□□□ -0.18
NPC1L1-201ENST00000289547 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
NPC1L1-201ENST00000289547 NSD2O96028 1365 aa13.91□□□□□ -0.18
NPC1L1-201ENST00000289547 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
NPC1L1-201ENST00000289547 NME9Q86XW9 330 aa13.91□□□□□ -0.18
NPC1L1-201ENST00000289547 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 BACH2Q9BYV9 841 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 BRD4O60885 1362 aaPredicted RBP13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 TRAK2O60296 914 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 GPATCH3Q96I76 525 aa13.9□□□□□ -0.18
NPC1L1-201ENST00000289547 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.19
NPC1L1-201ENST00000289547 ELL2O00472 640 aaPredicted RBP13.89□□□□□ -0.19
NPC1L1-201ENST00000289547 PUS7Q96PZ0 661 aaKnown RBP13.89□□□□□ -0.19
NPC1L1-201ENST00000289547 COG6Q9Y2V7 657 aa13.89□□□□□ -0.19
NPC1L1-201ENST00000289547 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms