RNA–Protein interactions for RNA: ENST00000286190.9

ALS2CR12-201, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ALS2CR12, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-201ENST00000286190 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
ALS2CR12-201ENST00000286190 TAGLNQ01995 201 aaKnown RBP6.96□□□□□ -1.3
ALS2CR12-201ENST00000286190 NPAS4Q8IUM7 802 aa6.96□□□□□ -1.3
ALS2CR12-201ENST00000286190 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
ALS2CR12-201ENST00000286190 BIN2Q9UBW5 565 aaPredicted RBP6.96□□□□□ -1.3
ALS2CR12-201ENST00000286190 PRSS12P56730 875 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 GUCA2AQ02747 115 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 CDCA7LQ96GN5 454 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 POLR3GLQ9BT43 218 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 PCDHGC3Q9UN70 934 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 COL9A1P20849 921 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 ADGRD1Q6QNK2 874 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 HLA-CQ95604 372 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 FAM198AQ9UFP1 575 aa6.95□□□□□ -1.3
ALS2CR12-201ENST00000286190 KDM4AO75164 1064 aa6.94□□□□□ -1.3
ALS2CR12-201ENST00000286190 FDX1P10109 184 aa6.94□□□□□ -1.3
ALS2CR12-201ENST00000286190 ZC3H6P61129 1189 aaKnown RBP6.94□□□□□ -1.3
ALS2CR12-201ENST00000286190 EYA1Q99502 592 aa6.94□□□□□ -1.3
ALS2CR12-201ENST00000286190 CANXP27824 592 aaKnown RBP6.93□□□□□ -1.3
ALS2CR12-201ENST00000286190 NAALADL2Q58DX5 795 aa6.93□□□□□ -1.3
ALS2CR12-201ENST00000286190 NR6A1Q15406 480 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 CRTC2Q53ET0 693 aaPredicted RBP6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 PACS2Q86VP3 889 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 HELBQ8NG08 1087 aaPredicted RBP6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 ZBED2Q9BTP6 218 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 CWC22Q9HCG8 908 aaKnown RBP6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 CFAP99D6REC4 459 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 C3orf80F5H4A9 247 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 HOXA2O43364 376 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 RECKO95980 971 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 PROX2Q3B8N5 592 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 DEPDC4Q8N2C3 294 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 VPS9D1Q9Y2B5 631 aa6.92□□□□□ -1.3
ALS2CR12-201ENST00000286190 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 TK2O00142 265 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 USP17L2Q6R6M4 530 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 UBXN4Q92575 508 aa6.91□□□□□ -1.3
ALS2CR12-201ENST00000286190 EIF4G2P78344 907 aaKnown RBP eCLIP6.9□□□□□ -1.3
ALS2CR12-201ENST00000286190 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.3
ALS2CR12-201ENST00000286190 TRIM6-TRIM34B2RNG4 842 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L15C9J2P7 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L10C9JJH3 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L12C9JPN9 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L11C9JVI0 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L21D6R901 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L18D6R9N7 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L22D6RA61 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L19D6RCP7 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L20D6RJB6 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 VAMP1P23763 118 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 FGD1P98174 961 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L24Q0WX57 530 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 MTMR2Q13614 643 aa6.9□□□□□ -1.31
ALS2CR12-201ENST00000286190 HRO43593 1189 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 SKIP12755 728 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 TSNAXIP1Q2TAA8 658 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 NUDT18Q6ZVK8 323 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 STAC3Q96MF2 364 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 SLC4A5Q9BY07 1137 aa6.89□□□□□ -1.31
ALS2CR12-201ENST00000286190 GIMAP6Q6P9H5 292 aa6.88□□□□□ -1.31
ALS2CR12-201ENST00000286190 FBXO33Q7Z6M2 555 aa6.88□□□□□ -1.31
ALS2CR12-201ENST00000286190 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP17L5A8MUK1 530 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 NBPF26B4DH59 902 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 DNAJB2P25686 324 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 SLF2Q8IX21 1173 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 CLP1Q92989 425 aaKnown RBP6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 TMEM134Q9H6X4 195 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 KIAA1468Q9P260 1216 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 MKRN1Q9UHC7 482 aaKnown RBP6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 TSKSQ9UJT2 592 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 PTK7Q13308 1070 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 PNMA1Q8ND90 353 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 BCCIPQ9P287 314 aaKnown RBP eCLIP6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
ALS2CR12-201ENST00000286190 GCGRP47871 477 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 USP46P62068 366 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 C9orf131Q5VYM1 1079 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 TATDN2Q93075 761 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 ANO2Q9NQ90 1003 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 PNMA3Q9UL41 463 aa6.86□□□□□ -1.31
ALS2CR12-201ENST00000286190 ANKRD62A6NC57 917 aa6.85□□□□□ -1.31
ALS2CR12-201ENST00000286190 ABL1P00519 1130 aa6.85□□□□□ -1.31
ALS2CR12-201ENST00000286190 RASA1P20936 1047 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms