RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 CNTROBQ8N137 903 aa24.35■■□□□ 1.49
CACNA1B-201ENST00000277549 RDXP35241 583 aaKnown RBP24.35■■□□□ 1.49
CACNA1B-201ENST00000277549 TTC16Q8NEE8 873 aa24.35■■□□□ 1.49
CACNA1B-201ENST00000277549 SSR1P43307 286 aaKnown RBP24.34■■□□□ 1.49
CACNA1B-201ENST00000277549 ZNF76P36508 570 aa24.34■■□□□ 1.49
CACNA1B-201ENST00000277549 SKOR2Q2VWA4 1001 aaPredicted RBP24.33■■□□□ 1.49
CACNA1B-201ENST00000277549 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
CACNA1B-201ENST00000277549 TMEM87AQ8NBN3 555 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 PSMD1Q99460 953 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 PDE3BQ13370 1112 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 ENOX2Q16206 610 aaKnown RBP24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 GPRASP1Q5JY77 1395 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 CCDC158Q5M9N0 1113 aa24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 FKBP4Q02790 459 aaKnown RBP eCLIP24.32■■□□□ 1.48
CACNA1B-201ENST00000277549 GNL3LQ9NVN8 582 aaKnown RBP24.31■■□□□ 1.48
CACNA1B-201ENST00000277549 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
CACNA1B-201ENST00000277549 SEPT7Q16181 437 aaKnown RBP24.31■■□□□ 1.48
CACNA1B-201ENST00000277549 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
CACNA1B-201ENST00000277549 HSP90AB4PQ58FF6 505 aa24.3■■□□□ 1.48
CACNA1B-201ENST00000277549 TRMT1LQ7Z2T5 733 aaKnown RBP24.3■■□□□ 1.48
CACNA1B-201ENST00000277549 CCDC69A6NI79 296 aa24.29■■□□□ 1.48
CACNA1B-201ENST00000277549 TXLNAP40222 546 aa24.29■■□□□ 1.48
CACNA1B-201ENST00000277549 TXNDC2Q86VQ3 553 aa24.29■■□□□ 1.48
CACNA1B-201ENST00000277549 MPNDQ8N594 471 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 PHLDB1Q86UU1 1377 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 TATP17735 454 aaPredicted RBP24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 SPC24Q8NBT2 197 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 CENPHQ9H3R5 247 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 MPHOSPH8Q99549 860 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 GNAI1P63096 354 aa24.28■■□□□ 1.48
CACNA1B-201ENST00000277549 LIG1P18858 919 aa24.27■■□□□ 1.48
CACNA1B-201ENST00000277549 RUNDC1Q96C34 613 aa24.27■■□□□ 1.48
CACNA1B-201ENST00000277549 TAX1BP1Q86VP1 789 aa24.27■■□□□ 1.47
CACNA1B-201ENST00000277549 HSP90B2PQ58FF3 399 aa24.26■■□□□ 1.47
CACNA1B-201ENST00000277549 FAM177A1Q8N128 213 aaPredicted RBP24.26■■□□□ 1.47
CACNA1B-201ENST00000277549 RAI14Q9P0K7 980 aa24.26■■□□□ 1.47
CACNA1B-201ENST00000277549 SOGA3Q5TF21 947 aa24.26■■□□□ 1.47
CACNA1B-201ENST00000277549 NAT10Q9H0A0 1025 aaKnown RBP24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 DEF6Q9H4E7 631 aa24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 TSHZ2Q9NRE2 1034 aa24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 H0YHG0 523 aa24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 PSMA5P28066 241 aa24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
CACNA1B-201ENST00000277549 FAM193AP78312 1265 aa24.23■■□□□ 1.47
CACNA1B-201ENST00000277549 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
CACNA1B-201ENST00000277549 AXDND1Q5T1B0 1012 aaPredicted RBP24.23■■□□□ 1.47
CACNA1B-201ENST00000277549 MYO6Q9UM54 1294 aa24.23■■□□□ 1.47
CACNA1B-201ENST00000277549 TRIM5Q9C035 493 aa24.23■■□□□ 1.47
CACNA1B-201ENST00000277549 ADAMTS2O95450 1211 aa24.22■■□□□ 1.47
CACNA1B-201ENST00000277549 USP47Q96K76 1375 aa24.22■■□□□ 1.47
CACNA1B-201ENST00000277549 SLC4A8Q2Y0W8 1093 aa24.22■■□□□ 1.47
CACNA1B-201ENST00000277549 CLASRPQ8N2M8 674 aaKnown RBP24.22■■□□□ 1.47
CACNA1B-201ENST00000277549 GSE1Q14687 1217 aa24.21■■□□□ 1.47
CACNA1B-201ENST00000277549 FILIP1LQ4L180 1135 aa24.21■■□□□ 1.47
CACNA1B-201ENST00000277549 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
CACNA1B-201ENST00000277549 ACBD3Q9H3P7 528 aa24.2■■□□□ 1.47
CACNA1B-201ENST00000277549 PRDM2Q13029 1718 aa24.2■■□□□ 1.47
CACNA1B-201ENST00000277549 STK38Q15208 465 aa24.2■■□□□ 1.47
CACNA1B-201ENST00000277549 ARGLU1Q9NWB6 273 aaPredicted RBP24.2■■□□□ 1.47
CACNA1B-201ENST00000277549 PTPRGP23470 1445 aa24.2■■□□□ 1.46
CACNA1B-201ENST00000277549 SMARCE1Q969G3 411 aa24.2■■□□□ 1.46
CACNA1B-201ENST00000277549 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
CACNA1B-201ENST00000277549 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.19■■□□□ 1.46
CACNA1B-201ENST00000277549 TSPYL1Q9H0U9 437 aa24.19■■□□□ 1.46
CACNA1B-201ENST00000277549 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.19■■□□□ 1.46
CACNA1B-201ENST00000277549 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
CACNA1B-201ENST00000277549 TDO2P48775 406 aa24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 FIBPO43427 364 aa24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 NOM1Q5C9Z4 860 aaKnown RBP24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 C22orf23Q9BZE7 217 aa24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 DHX57Q6P158 1386 aaKnown RBP24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 SERPINC1P01008 464 aa24.18■■□□□ 1.46
CACNA1B-201ENST00000277549 MTHFSP49914 203 aa24.17■■□□□ 1.46
CACNA1B-201ENST00000277549 DCTN1Q14203 1278 aa24.17■■□□□ 1.46
CACNA1B-201ENST00000277549 KINO60870 393 aaKnown RBP24.17■■□□□ 1.46
CACNA1B-201ENST00000277549 CCDC57Q2TAC2 916 aa24.16■■□□□ 1.46
CACNA1B-201ENST00000277549 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
CACNA1B-201ENST00000277549 DHX8Q14562 1220 aaKnown RBP24.16■■□□□ 1.46
CACNA1B-201ENST00000277549 CCDC181Q5TID7 509 aa24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 ERC1Q8IUD2 1116 aa24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 CDC45O75419 566 aa24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 ZRSR2Q15696 482 aaKnown RBP24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 CHMP5Q9NZZ3 219 aa24.15■■□□□ 1.46
CACNA1B-201ENST00000277549 ABCF2Q9UG63 623 aa24.14■■□□□ 1.46
CACNA1B-201ENST00000277549 LRP2BPQ9P2M1 347 aa24.14■■□□□ 1.46
CACNA1B-201ENST00000277549 CAVIN1Q6NZI2 390 aaKnown RBP24.14■■□□□ 1.45
CACNA1B-201ENST00000277549 PRKAR2BP31323 418 aa24.13■■□□□ 1.45
CACNA1B-201ENST00000277549 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
CACNA1B-201ENST00000277549 SLC4A2P04920 1241 aa24.13■■□□□ 1.45
CACNA1B-201ENST00000277549 NEK4P51957 841 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 PODXL2Q9NZ53 605 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 ANKIB1Q9P2G1 1089 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 CRACR2BQ8N4Y2 399 aaPredicted RBP24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 NACAP1Q9BZK3 213 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 PRAM1Q96QH2 718 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 TAF3Q5VWG9 929 aa24.12■■□□□ 1.45
CACNA1B-201ENST00000277549 PRPF40AO75400 957 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms