RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 GNAI3P08754 354 aa23.36■■□□□ 1.33
FAM20B-201ENST00000263733 HSP90B2PQ58FF3 399 aa23.36■■□□□ 1.33
FAM20B-201ENST00000263733 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
FAM20B-201ENST00000263733 KINO60870 393 aaKnown RBP23.35■■□□□ 1.33
FAM20B-201ENST00000263733 RIC3Q7Z5B4 369 aa23.35■■□□□ 1.33
FAM20B-201ENST00000263733 WDR63Q8IWG1 891 aa23.35■■□□□ 1.33
FAM20B-201ENST00000263733 RALYLQ86SE5 291 aaKnown RBP23.34■■□□□ 1.33
FAM20B-201ENST00000263733 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
FAM20B-201ENST00000263733 OLFM4Q6UX06 510 aa23.33■■□□□ 1.33
FAM20B-201ENST00000263733 ZNF428Q96B54 188 aa23.33■■□□□ 1.33
FAM20B-201ENST00000263733 WWC1Q8IX03 1113 aa23.33■■□□□ 1.33
FAM20B-201ENST00000263733 STK3Q13188 491 aa23.33■■□□□ 1.32
FAM20B-201ENST00000263733 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
FAM20B-201ENST00000263733 CIZ1Q9ULV3 898 aaPredicted RBP23.32■■□□□ 1.32
FAM20B-201ENST00000263733 SYCE3A1L190 88 aa23.32■■□□□ 1.32
FAM20B-201ENST00000263733 GNAI2P04899 355 aa23.32■■□□□ 1.32
FAM20B-201ENST00000263733 ERBINQ96RT1 1412 aa23.31■■□□□ 1.32
FAM20B-201ENST00000263733 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
FAM20B-201ENST00000263733 ZSCAN30Q86W11 494 aa23.31■■□□□ 1.32
FAM20B-201ENST00000263733 CCDC192P0DO97 292 aa23.31■■□□□ 1.32
FAM20B-201ENST00000263733 NAP1L1P55209 391 aaKnown RBP23.3■■□□□ 1.32
FAM20B-201ENST00000263733 TMEM57Q8N5G2 664 aa23.3■■□□□ 1.32
FAM20B-201ENST00000263733 DNAJC2Q99543 621 aaKnown RBP23.3■■□□□ 1.32
FAM20B-201ENST00000263733 RUFY1Q96T51 708 aa23.3■■□□□ 1.32
FAM20B-201ENST00000263733 WDR33Q9C0J8 1336 aaKnown RBP23.3■■□□□ 1.32
FAM20B-201ENST00000263733 ATP2B1P20020 1258 aa23.3■■□□□ 1.32
FAM20B-201ENST00000263733 PDCP20941 246 aa23.3■■□□□ 1.32
FAM20B-201ENST00000263733 CCDC30Q5VVM6 783 aa23.29■■□□□ 1.32
FAM20B-201ENST00000263733 CCDC66A2RUB6 948 aa23.29■■□□□ 1.32
FAM20B-201ENST00000263733 TBC1D2Q9BYX2 928 aa23.29■■□□□ 1.32
FAM20B-201ENST00000263733 RAD21O60216 631 aa23.29■■□□□ 1.32
FAM20B-201ENST00000263733 TNMDQ9H2S6 317 aa23.29■■□□□ 1.32
FAM20B-201ENST00000263733 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 G3V3G9 751 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 CCDC47Q96A33 483 aaKnown RBP23.28■■□□□ 1.32
FAM20B-201ENST00000263733 ACBD3Q9H3P7 528 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 ERICH2A1L162 156 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 CCDC112Q8NEF3 446 aa23.28■■□□□ 1.32
FAM20B-201ENST00000263733 NOM1Q5C9Z4 860 aaKnown RBP23.27■■□□□ 1.32
FAM20B-201ENST00000263733 LRRCC1Q9C099 1032 aa23.27■■□□□ 1.32
FAM20B-201ENST00000263733 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
FAM20B-201ENST00000263733 SKIDA1Q1XH10 827 aa23.26■■□□□ 1.31
FAM20B-201ENST00000263733 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.311e-6■■■□□ 14.8
FAM20B-201ENST00000263733 AK7Q96M32 723 aa23.26■■□□□ 1.31
FAM20B-201ENST00000263733 CYP46A1Q9Y6A2 500 aa23.26■■□□□ 1.31
FAM20B-201ENST00000263733 DHX16O60231 1041 aaKnown RBP23.25■■□□□ 1.31
FAM20B-201ENST00000263733 TMX4Q9H1E5 349 aaPredicted RBP23.25■■□□□ 1.31
FAM20B-201ENST00000263733 PSME1Q06323 249 aa23.25■■□□□ 1.31
FAM20B-201ENST00000263733 NAIPQ13075 1403 aa23.25■■□□□ 1.31
FAM20B-201ENST00000263733 PRDM10Q9NQV6 1147 aa23.24■■□□□ 1.31
FAM20B-201ENST00000263733 LARP1BQ659C4 914 aaKnown RBP23.24■■□□□ 1.31
FAM20B-201ENST00000263733 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
FAM20B-201ENST00000263733 PRAM1Q96QH2 718 aa23.24■■□□□ 1.31
FAM20B-201ENST00000263733 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
FAM20B-201ENST00000263733 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
FAM20B-201ENST00000263733 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
FAM20B-201ENST00000263733 STK38Q15208 465 aa23.23■■□□□ 1.31
FAM20B-201ENST00000263733 FAM177A1Q8N128 213 aaPredicted RBP23.23■■□□□ 1.31
FAM20B-201ENST00000263733 CAGE1Q8TC20 777 aa23.23■■□□□ 1.31
FAM20B-201ENST00000263733 NLRP6P59044 892 aa23.22■■□□□ 1.31
FAM20B-201ENST00000263733 KRT85P78386 507 aa23.22■■□□□ 1.31
FAM20B-201ENST00000263733 SSFA2P28290 1259 aa23.21■■□□□ 1.31
FAM20B-201ENST00000263733 IL1RAPL2Q9NP60 686 aa23.21■■□□□ 1.31
FAM20B-201ENST00000263733 CWC15Q9P013 229 aaKnown RBP23.21■■□□□ 1.31
FAM20B-201ENST00000263733 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
FAM20B-201ENST00000263733 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.31
FAM20B-201ENST00000263733 SCAPERQ9BY12 1400 aa23.2■■□□□ 1.31
FAM20B-201ENST00000263733 TNPO1Q92973 898 aaKnown RBP23.2■■□□□ 1.3
FAM20B-201ENST00000263733 FYB1O15117 783 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 VPS37DQ86XT2 251 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 STK11IPQ8N1F8 1099 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 ME1P48163 572 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 FILIP1Q7Z7B0 1213 aa23.2■■□□□ 1.3
FAM20B-201ENST00000263733 SIL1Q9H173 461 aa23.19■■□□□ 1.3
FAM20B-201ENST00000263733 SERPINC1P01008 464 aa23.19■■□□□ 1.3
FAM20B-201ENST00000263733 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
FAM20B-201ENST00000263733 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
FAM20B-201ENST00000263733 EVA1CP58658 441 aa23.18■■□□□ 1.3
FAM20B-201ENST00000263733 CWC27Q6UX04 472 aaKnown RBP23.18■■□□□ 1.3
FAM20B-201ENST00000263733 ZNF396Q96N95 335 aaPredicted RBP23.18■■□□□ 1.3
FAM20B-201ENST00000263733 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
FAM20B-201ENST00000263733 H0YHG0 523 aa23.17■■□□□ 1.3
FAM20B-201ENST00000263733 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
FAM20B-201ENST00000263733 MTMR7Q9Y216 660 aa23.17■■□□□ 1.3
FAM20B-201ENST00000263733 SMARCA5O60264 1052 aaPredicted RBP23.17■■□□□ 1.3
FAM20B-201ENST00000263733 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
FAM20B-201ENST00000263733 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
FAM20B-201ENST00000263733 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
FAM20B-201ENST00000263733 ARHGAP5Q13017 1502 aa23.17■■□□□ 1.3
FAM20B-201ENST00000263733 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
FAM20B-201ENST00000263733 PRG4Q92954 1404 aaPredicted RBP23.17■■□□□ 1.3
FAM20B-201ENST00000263733 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 CBX1P83916 185 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 SSH1Q8WYL5 1049 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 JAKMIP1Q96N16 626 aaKnown RBP23.16■■□□□ 1.3
FAM20B-201ENST00000263733 CAMK4Q16566 473 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 PDCL2Q8N4E4 241 aa23.16■■□□□ 1.3
FAM20B-201ENST00000263733 SPATA32Q96LK8 384 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms