RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CCDC152Q4G0S7 254 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 ELMSAN1Q6PJG2 1045 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 HOMEZQ8IX15 550 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 NEUROD6Q96NK8 337 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 API5Q9BZZ5 524 aaKnown RBP4.87□□□□□ -1.63
RNF38-201ENST00000259605 KRT18P05783 430 aaKnown RBP4.87□□□□□ -1.63
RNF38-201ENST00000259605 BICDL1Q6ZP65 573 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 OFD1O75665 1012 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 ZNF76P36508 570 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 CHMP4BP1P59074 171 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 CAVIN4Q5BKX8 364 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 EYA3Q99504 573 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 PDCL3Q9H2J4 239 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 TSPYL4Q9UJ04 414 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 ATP6V1DQ9Y5K8 247 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 NPHP3Q7Z494 1330 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 IFT140Q96RY7 1462 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 MRC2Q9UBG0 1479 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 TXLNAP40222 546 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 TNPO1Q92973 898 aaKnown RBP4.87□□□□□ -1.63
RNF38-201ENST00000259605 PCMTD1Q96MG8 357 aaPredicted RBP4.87□□□□□ -1.63
RNF38-201ENST00000259605 SLC5A4Q9NY91 659 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 NOD1Q9Y239 953 aa4.87□□□□□ -1.63
RNF38-201ENST00000259605 PABPN1LA6NDY0 278 aaKnown RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 E9PSI1 815 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 CCDC173Q0VFZ6 552 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 FKBP5Q13451 457 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 ANKIB1Q9P2G1 1089 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 PHLDB1Q86UU1 1377 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 SCAPERQ9BY12 1400 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 NCBP1Q09161 790 aaKnown RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 SPC25Q9HBM1 224 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 GRIN2BQ13224 1484 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 RAPGEF2Q9Y4G8 1499 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 BIRC2Q13490 618 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 HSP90AA2PQ14568 343 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 TAF12Q16514 161 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 DDX46Q7L014 1031 aaKnown RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 TRIM22Q8IYM9 498 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 PLCD3Q8N3E9 789 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 CUL5Q93034 780 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 CENPJQ9HC77 1338 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 ST20-MTHFSA0A0A6YYL1 179 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 POTEJP0CG39 1038 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 MTHFSP49914 203 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 CCDC57Q2TAC2 916 aa4.86□□□□□ -1.63
RNF38-201ENST00000259605 AXDND1Q5T1B0 1012 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 SLKQ9H2G2 1235 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 PRG4Q92954 1404 aaPredicted RBP4.86□□□□□ -1.63
RNF38-201ENST00000259605 TCERG1O14776 1098 aaKnown RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 HLA-DOAP06340 250 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 MATR3P43243 847 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNF38-201ENST00000259605 NUTM2GQ5VZR2 741 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 ZNF530Q6P9A1 599 aaPredicted RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 GAPVD1Q14C86 1478 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 GLRX3O76003 335 aaKnown RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 RXRBP28702 533 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 GNAI1P63096 354 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 AIMP1Q12904 312 aaKnown RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 GRIPAP1Q4V328 841 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 CCDC82Q8N4S0 544 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 GOLGA6L1Q8N7Z2 621 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 SUPT20HQ8NEM7 779 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 CCDC87Q9NVE4 849 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 BMP2KQ9NSY1 1161 aaPredicted RBP4.85□□□□□ -1.63
RNF38-201ENST00000259605 IVNS1ABPQ9Y6Y0 642 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 RPGRIP1LQ68CZ1 1315 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 SLC26A8Q96RN1 970 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 HOMER2Q9NSB8 354 aa4.85□□□□□ -1.63
RNF38-201ENST00000259605 IFIT1P09914 478 aaKnown RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 CCDC30Q5VVM6 783 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 PPP1R42Q7Z4L9 355 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 ANKRD18AQ8IVF6 992 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 UTP14AQ9BVJ6 771 aaKnown RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 CHMP5Q9NZZ3 219 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 FBXO3Q9UK99 471 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 UQCRHP07919 91 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 CDR1P51861 262 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 ZRSR2Q15696 482 aaKnown RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 CCDC112Q8NEF3 446 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 ZNF219Q9P2Y4 722 aaPredicted RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 MYO6Q9UM54 1294 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 UQCRHLA0A096LP55 91 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 DDB1Q16531 1140 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 TTC39AQ5SRH9 613 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 CDC5LQ99459 802 aaKnown RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 ZMYND15Q9H091 742 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 GPHNQ9NQX3 736 aaPredicted RBP4.84□□□□□ -1.63
RNF38-201ENST00000259605 FHOD3Q2V2M9 1422 aa4.84□□□□□ -1.63
RNF38-201ENST00000259605 ST18O60284 1047 aa4.84□□□□□ -1.64
RNF38-201ENST00000259605 SPTY2D1Q68D10 685 aaPredicted RBP4.84□□□□□ -1.64
RNF38-201ENST00000259605 LRRC45Q96CN5 670 aa4.84□□□□□ -1.64
RNF38-201ENST00000259605 HIP1O00291 1037 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 CCDC150Q8NCX0 1101 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 MPHOSPH9Q99550 1183 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 COG6Q9Y2V7 657 aa4.83□□□□□ -1.64
RNF38-201ENST00000259605 HMGB1P09429 215 aaKnown RBP4.83□□□□□ -1.64
RNF38-201ENST00000259605 PDIA4P13667 645 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms